Procambarus clarkii (red swamp crayfish): 123762115
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Entry
123762115 CDS
T07930
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123762115
Membrane trafficking [BR:
pcla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
123762115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
123762115
NCBI-ProteinID:
XP_045604391
LinkDB
All DBs
Position
34:complement(40377441..40453943)
Genome browser
AA seq
3088 aa
AA seq
DB search
MVREMFRQRLRGGHKVGGPSSITRSLQGQTDFSRQTGNLVGSQYNASIPPSQSGPTQQPR
QPEEQLQQQQQLYPTGNSGSGWGGDSSDGAWNWGDGDAWSWNANQANNPRYQQVNHRQQQ
PLLSRRHPQQPSQQYDQQHAYSQHLQYTSQHQFSKATQNDTYSSTSVTGTASSLDENRVP
TNNPQHPQPQLQQQQYVNGNAQNGQGTDDWGADNWGNDWGNAEPYNNNNNNNKPANYAKQ
ENRQQHQDYHSYQEHQQQQPTCQVYPQQPQQQQQQLAHQNYPQQQQQLAHQSYPQQQQQQ
QQPSQRQEYHHHQYFPLQQQQENAHQQLNPDPVVHQQLNKDTVIHQQLNQEPVHQQLNQE
PVHQQLKQEPVHQQLNQEPVHQQLNQEPVHQQLNQEPVHQQLNQEPVHQQLNQEPVHQQL
NQDLQQQFENQYPQDSQQEYRQNFNSLQEYNQQQQYSETTKQYVDEDWGWGIDDWQVNGQ
TAEHRENIHQLTNPAETQQPAGSLDTLKSQQPPESWQPSESEQPAKSQNTADSWQPVQIQ
QKDLQAVHNNNNQTIPSEAKPHDHPQQGSAEALRTASSRDSAGDGWPDWEGEHAHGIKAN
RDSIQHIQTPEEQARGFSSVITASYQGDEAHKAECQEPQQQQPWDDGWGHRDISNHSDDA
GTAVPDNFTATQDSYIPTSSVPQNYSTLSGSTTMLEHVKHDWEQESIETYDVQRITDGYV
KNLETRPILEQQNIPMHQVETQSSNTSTNNPSLESSVAPLLMAESTVSGEHEAPAMLNTL
DDRWGDGWGEAEAHLEPDEVIKVSNKPEVHSQESCPDSEHVHSHETRQLEQLHSLDREMN
VSIAPVHSYSDFYPQNTAERQPHTEEEESHRAQERNENKPSEEQQYHDGYSSGAVTQSSG
WDDEWDQEIVITKSEDTSPLSSRDETCTSDNSKCEMEYVTKGVDNLTLSEDTHDPKEPLA
LSTESLLQELPPQTLQHRHFLTEAPQQELQHNSLLEQNVLLDSESHNQSRTECYESPQNY
DIGYVPHSYPQAPQESTSQVDLALKELHLNYPSIQQTEHEQRQEQQHQYEPQNQYMKQIN
QPLPSLSPKPTSINPPNEPEVLPQEKHFQPPTSSQPLGQPEAHPPVAGHSYQHHRDMNQE
IVQHPSTLITPLPDPLFSRIPDGASSIPEVPPVVGTDDDESSHIEDVYRPLIMSAGQQVS
ERPSSSQSVSSQPGCLSSQPVRPPSSHIFPDRPASNQSAHSVHSIHSVRSTQSAHSTHSF
ISQNQEVPLAEKSKIPACRSSLSQIGQQEECATVVQTNSSVDLSTDGTASPSNHSVGPPP
VSGPLGVVSSLKARKGSPFQPPSVKPSTPGIASDATYQSQFFSSPQTATTSTVTSVPGPA
FPDVSANLETTPDNNEQPSDPVKTGVPLWSASEDMLINVKLAVVSPSVDTFASTKSQLSS
NIIPLVIPGMVKEEKTELDTPTNQHSAATVHPEPPAAHSANLQAAVVKPKILSLSNMSAI
PTAPHVLDLSRPSRSTIEPRGDGSQNISDRPNFSRMVPGESSKGESTTVSTYQAPSIVPS
MPSERVVTGNDNPQPVLPVRIKQEPPEVRSPPDGPYTSNLMSTGASVIPPIRSETIGSEE
PTSRNFTTTNSGSRSDLANDHRADRGGRWERDHSRDRDSRSDKYRDGSREHNRDYYRDDS
PHSRRSYDRDYDRKYDDDRRRWRKESDEEEDGDRRYYESRDRRERAYRDELDRYSDRPIK
EEERSHSRDKRHDYRERPKDYYRTFDEDPYYGRGDRSRPVSRSSSINNLDNDGERSVHSH
RSRHDYYARHDRRDSHSRDSDPRDKDAPYTRDPREKDFYQRGWDTRDRRDTRYYNQRGGY
EDAYGSRDLYNQYHYASYYQYYRDHPYYKDYYKQWMKQYGQAYQPETFYDDRTSIHSGRS
SVNDDLKKSVSSPRAAYDPYGYYYGHTSQPPYNSSQFVQDIHGRASVGAYESTSVYPDGS
FTQLKSFASGELSGVPSVTDDVGSEAPQRMTPVLFGSAHINAQFTPGGQLLFVLPKDPRD
GQKAVVQLRDVQKMLCMNPALNKTVQQMKHYPGPLTLSDTHKDVVVKYCEQQVAEATRNQ
SLHDKESVILIWEYLALLVKQNGKLYGSDVAGLLLNGRDEPSQVQQVSLPIKSETPPESL
SMDASPQDEGIDISTQTLPTMPERNEAVLFKKFTEYLCLGRKREAVDYAMREGLWGHALA
LSYKMDTTTHTRVLAAFSSSIPHTNVLLTLFQQLSGKRPEITKSYTPQQWGDWRQHLAMM
ISNPTGHTQRDRASIVALGDTLASQGQLYAAHFCYLMAEVEWGSYSNKDSKLVLIGSSHQ
LPFQAFASNEAIQCTEVYEFARSLDSSNPLLDTFQSYKLVYALRLTEYGFPAEALRYCEV
ISQLVNKTPAPHKAEFLSQVYDLASRLKYHDLHYQMCQGEVSEMPDPQWLADFQGVVEAA
KAHAAQMTTMEDSYQTQPDGAKDSSHGITAVLDSNRQAHLSAAEPYQYFVKSDNSFHTLN
STTNNSYLQDTTLIEAPPSQVTFSDTMDGVYQHQHPANHLASSQSPEGLNDTSQLRDVMP
PSKESTPRHEVPVIQNTQQDQTQYSYSGGYWPGYSQPDPNASLYMQNNSPEETHGSLPPS
PETSGEQRRGSVTPMSQPNNLSNYQPYQEPYQAWEQQQQANDMSESMPSRSQETNDSDLS
SHTQRTPEEEAYWAEMTGKKGSIDLKRVDKKSEKGDGERCPREPLVHPLKLENKTKRVSF
KPQASQKERRESWADTEQQTSSAGEISSTCSQVQNSTNPAGHHNVNNTTDTSIKDKSDSD
KKSDKDLDKSQDKGGGWSLSKLLGWNKSKQAVLPDDKNPTIIWDENKKKWVNQDGDEEVT
APPPPPPKSAISGPGAPPLMMTRGGPRKSRYVNTEKDSSKGMAGGMPVNLPNSMLPPMPG
APMITGGPSMSPPVMVPAPVQLQQGGRDTPDGLQAAQGVGHQEQQQAPVPQVTPTLAPLP
DIAQMRRSRYISESSIELEDDWPPANTEGTSNDGSEGAGFVPMIGPPTGQPQFFNPAQFN
TPVTSNVNQTRRLGPGRRSLPAKRQEFT
NT seq
9267 nt
NT seq
+upstream
nt +downstream
nt
atggtcagagaaatgtttaggcagcgcttacgaggtggccataaagttggaggtccgagt
tccatcaccagatctcttcaaggccaaacggatttctctcggcaaactggtaacttggtt
ggatcacagtacaatgcatctattccgccttctcagtctggtcccactcagcagcctaga
cagcctgaagaacagctgcagcaacagcagcagctgtatccaacaggaaacagtggttca
ggatggggaggtgatagttcagatggtgcatggaactggggagatggagatgcttggtct
tggaatgcaaatcaagccaataatcctcggtatcagcaggtgaatcatcggcagcaacag
ccactgttgagtcggcgtcatcctcagcaaccatcgcagcagtatgatcagcagcatgct
tattcacaacatttgcagtatacttcacagcatcagttctctaaagcaacacaaaatgac
acatacagtagtacgtctgtgactggtacagcttcatcacttgacgagaatcgtgttcct
acaaataatccacaacatcctcagcctcaactacagcaacagcagtatgtcaatggcaat
gcacaaaatggtcagggaactgatgactggggtgcagataattggggtaatgactggggc
aatgcagaaccctacaacaacaacaataataataataaaccagctaattatgccaagcaa
gagaatcggcaacaacaccaggattaccacagctaccaggaacatcagcagcagcaacca
acttgtcaagtttaccctcaacaaccgcagcagcagcagcagcaactggctcatcaaaac
tacccacagcagcagcagcaactggctcatcaaagttatccacaacaacagcagcagcag
cagcagccgtcacaacgccaagaataccaccaccatcaatattttcctctgcaacagcaa
caagagaatgcacatcagcagttaaatccagatcctgtagtacatcaacagttaaataaa
gacactgtaatacatcaacagttaaatcaagagcctgtgcatcaacagttaaatcaagag
cctgtgcatcaacagttaaagcaagagcctgtgcatcaacagttaaatcaagagcctgtg
catcagcagttaaatcaagagcctgtgcatcagcagttaaatcaagagcctgtgcatcag
cagttaaatcaagagcctgtgcatcagcagttaaatcaagagcctgtgcatcagcagtta
aatcaagatcttcagcaacaatttgaaaaccagtatccgcaggattcccagcaagaatat
cggcaaaactttaattctcttcaagaatataaccagcagcaacaatattctgagactact
aaacaatatgttgatgaggattggggttggggaattgatgattggcaggtaaatggacag
acggcagagcaccgagaaaatattcatcaacttaccaacccagcagagacccagcaacct
gctgggtctctggacacactcaagtctcagcaacctccagagtcttggcaaccttcagag
tctgagcagcctgccaaatctcaaaatactgcagatagttggcaacccgtccagattcag
caaaaggaccttcaagcagtacacaataataataatcagactattcctagtgaagcaaaa
ccccatgaccatccacagcagggtagtgcggaagctctgaggactgcaagcagcagagat
tcggctggggatggatggcctgattgggaaggagagcatgcccatgggataaaagcaaat
agagattctattcaacacattcaaacacctgaagaacaagcaagaggtttctcttcggtg
ataacggcttcgtatcaaggtgacgaggcacacaaggcagaatgtcaggaaccgcagcag
cagcaaccgtgggatgatggttggggtcacagagatattagtaaccattcagatgatgct
ggtactgctgttcctgataattttacagcaacacaagatagttacatacctacctccagt
gttcctcaaaattattctaccttatcaggtagtactacaatgttggaacatgtcaagcat
gactgggaacaggaatcaatcgagacatatgatgtgcaaagaataactgatgggtatgtt
aaaaatttggagactcggccaatcttagaacaacagaacatccccatgcatcaagtggag
actcaaagtagtaacaccagtactaacaacccatcattagaaagttctgttgctccttta
cttatggcagagtctactgtgtcaggtgaacatgaagctcctgccatgctgaatactttg
gatgacaggtggggtgatggttggggagaggcagaagcacatctggaaccagatgaagta
attaaagtttctaataagcctgaagtgcatagccaggaaagttgtcctgattctgaacac
gtgcattcacatgaaactcggcagcttgaacaactgcattcactagatagggagatgaat
gtatctattgcccctgtacatagttattcagatttttatcctcagaatactgcagaacgt
caaccacacacggaagaagaagaaagtcatcgtgctcaggaaaggaatgaaaacaagccc
agtgaagagcagcagtaccatgatggttacagtagtggagctgtgactcagtcaagtgga
tgggatgatgaatgggatcaagaaattgtaattacaaaatcggaggacacatctccacta
tccagtagggatgaaacctgtacttctgataactccaaatgtgaaatggaatatgtaaca
aaaggtgtagataatctaactctttcggaagatacacatgatcccaaggaaccccttgct
ctttctaccgagtctctcctgcaggagcttcctccacaaacacttcaacatcggcatttt
cttactgaggctccacagcaagagctgcaacataactctttgttggaacagaatgtttta
ctggattcagagtcccataatcaatcaagaactgaatgctatgagtctccacaaaattat
gacattgggtatgtgccacatagttacccgcaggcacctcaagaatctaccagtcaggtt
gatctagcactcaaagagctacatttgaattatccctctattcagcaaaccgagcatgag
caaagacaagagcagcagcatcaatatgagccacaaaatcagtatatgaagcaaataaat
caacccttgccttcattgagtcctaaacctacatcaataaatccaccaaatgaacctgaa
gtattgccacaagaaaaacattttcagccacctacatcatctcagcctctcggtcagcct
gaagcccatccacctgttgcaggtcacagttaccagcatcatcgggatatgaaccaagag
attgtgcaacatccatcgaccttaattactccactgcctgatccccttttctcgagaatt
cctgatggggcatcatctattcctgaagtacctcctgttgtaggcacagatgatgatgaa
agcagccatatagaggatgtttataggcctttaataatgagtgctggccagcaggtatct
gagcgtccatcctcctctcaatctgttagctctcaaccaggttgtctttcctctcaacct
gttcgtcctccatcttcacatatctttcccgatcgtccagcgtctaaccaatctgctcac
tctgtgcattctattcattctgttcggtcaacacagtcagcacattctacacattcattc
attagtcagaaccaggaagtacctttagcagagaagtctaaaattcctgcatgtcggtca
tctctcagtcaaattggtcagcaggaggagtgtgctactgttgtgcaaacaaattcttct
gtagatctcagtacagatggcacagcttccccatctaaccattctgtaggcccaccacca
gtgtctggacctcttggggtagtatcaagtttaaaagcaagaaaaggtagtcctttccaa
cccccttctgtgaagccgtctacccctggcatagcctcagatgcaacataccaatcacag
tttttctcttcaccccaaactgctaccaccagtaccgttacttcggtgcctggcccagcc
tttcctgatgttagtgctaatcttgaaacaactcctgataataatgaacaaccctctgat
ccagtaaaaactggagtacctctttggtctgcctctgaagacatgttaattaatgttaag
ttagctgttgtttccccctctgtagatacatttgcctcaaccaagtctcagctgtcttct
aacatcattcctttagtaatacctggcatggtgaaggaagaaaagactgagctagataca
cccacaaatcaacattctgctgctactgttcatccagaacctccagctgctcatagtgct
aatttacaagctgcagtagtgaaaccaaaaattctatcactttccaacatgtctgctatt
cctactgcaccacatgttttagatctatcacggccttcaagatctacaattgagcctaga
ggtgatggctctcaaaatataagcgacagaccaaattttagccgtatggttcctggggaa
tctagtaaaggtgaatccactactgtatctacttatcaagctccatctatagttccatcc
atgccatcagaaagggttgttacggggaatgataaccctcaaccagtgctaccagtacga
ataaaacaggagccaccagaagtaagatcaccacctgatggaccatacaccagtaactta
atgagtacgggtgcttctgttataccaccaattagaagcgagaccattggttcagaggaa
cctacatcacgtaacttcactacaacaaattctgggagccgttctgatttagctaatgat
cacagggctgacaggggtggtcgttgggaaagagaccactctcgtgacagagacagtaga
agtgataaatatcgcgatgggagccgtgagcataatagagattattatcgtgatgattct
ccacacagcaggcgttcttatgatcgtgactatgataggaagtatgatgatgacaggaga
cgctggcgaaaagaatctgatgaagaggaggatggtgatcgaagatattacgaatctcga
gatagacgtgaacgagcatatagggatgaattggaccgttatagtgatcgacccataaaa
gaagaagaaagatcacattctagagacaagcgccatgattatcgtgagaggccaaaagat
tattacaggacttttgatgaagatccttactatggaagaggagacaggtctcgaccagta
tcacgatctagtagtatcaacaacctagacaatgatggtgaacgctcagttcattctcat
cgatcccgacacgattattatgctcgacatgatcgtcgggactcccactcgagggactcg
gatcctagagacaaggatgccccatataccagagatcctagggaaaaagatttctatcaa
cgtggatgggataccagagatcgtcgggatacccgttactataaccaaaggggtggctat
gaagatgcatatggttctagagatctgtataaccagtatcactatgctagttattatcaa
tactatcgggatcatccatactacaaggattattataaacagtggatgaagcagtatggg
caggcttatcaaccggaaaccttttatgatgaccgaaccagtattcattctggacggtca
tctgtaaacgacgatctaaaaaagtctgtcagcagtccacgtgcggcctatgatccttat
ggctactattacggccacacaagccagcccccctataattccagccaattcgtccaagat
attcatggaagggcttctgtgggggcttatgagtccacttctgtatatcctgatggatcc
ttcacccagctcaagtcctttgccagtggtgaattaagtggtgtgccatcagtaacagat
gatgttggcagtgaagctccccagcgtatgactccagtactatttggtagtgcgcacata
aatgcccaattcactcctggtggtcagctgttatttgtgcttccaaaagaccctagggat
ggacagaaagctgtggtacaattgcgtgatgttcagaagatgttgtgcatgaaccctgca
ttaaataaaacggttcagcaaatgaaacattatccaggaccacttacactgtcggatact
cacaaggatgtggtggtgaaatattgtgagcagcaggttgccgaggcaactagaaatcaa
agccttcatgacaaggaatcggttatactaatatgggaatatctagcactgctggtgaaa
caaaatggcaagctttatggaagtgatgtagctggactcttattaaatggacgagatgag
ccttctcaggtgcaacaagtcagtttgcctattaaatctgaaacccctccagagagtctg
tccatggatgccagtccacaagatgaagggattgacatttcaactcaaacactacctaca
atgccagaaaggaatgaagcagtactttttaaaaagttcacagagtatctctgcctggga
agaaaacgtgaagctgttgattatgcaatgcgagaaggattgtggggtcatgctcttgcc
ctgtcatacaagatggatacaaccacccacactcgtgtgttggctgccttctccagctct
atccctcacactaatgttttattaacattatttcaacagttatcagggaaaaggccagag
atcaccaagagctacacaccacaacagtggggtgactggcggcagcacctggcaatgatg
atatccaatcccactgggcacacgcaacgtgaccgagcctctattgtagccctaggagac
acgttggcttctcaaggacagctgtatgctgctcacttctgttacctcatggctgaagtt
gaatggggttcatattctaacaaggattcaaaacttgtccttattggttcttctcatcag
cttccattccaggcctttgccagtaatgaagcaatacagtgcactgaagtatacgagttt
gcccggtctcttgacagtagtaatccgctattggatacattccagtcgtataagcttgtt
tatgctctcaggctgacagaatatgggtttccagctgaagcattaagatactgtgaggta
atcagtcagttggtaaacaagacaccagctccacataaggcagagttcctctctcaggtg
tatgacctagcttcccgccttaaatatcatgatctccactatcagatgtgtcaaggagaa
gtatcagagatgccagatccccaatggctggctgattttcagggtgttgtggaagcagcc
aaagcccatgcagctcaaatgacaacaatggaagatagttatcaaactcaaccagatgga
gctaaggattccagccatggaataactgcagtgttggattctaatagacaagcgcacctt
tcagctgccgaaccctaccagtattttgtgaagtcggataactcttttcacactttaaac
tctactactaataattcctacttgcaagatactacgctaattgaagcccctccttcacaa
gttaccttcagtgatacgatggatggtgtgtatcaacaccaacatccagcaaatcacttg
gcgtcctcacaatctcctgaaggattgaatgatactagccagttgagggatgttatgccc
ccatccaaggagagcacaccgcgccatgaagtccctgtcatacagaatactcaacaggat
caaacgcaatattcatacagtggtgggtactggccaggatattcccagcctgaccctaat
gcgtcattatacatgcagaacaactccccagaagaaacccatggcagtcttccaccctct
cctgaaacaagcggagagcagagacgtggcagtgttacacctatgtcacagccaaataac
ttgagcaactatcaaccctatcaagaaccttaccaagcttgggaacagcagcagcaagca
aatgatatgtctgaatctatgccatccagatctcaggaaaccaatgactctgatctttca
tctcatactcaaagaacacctgaagaagaagcttactgggcagaaatgacgggtaaaaag
ggtagcattgacctcaagagagtggacaagaagtctgagaaaggtgatggagaacggtgt
ccaagggaacctctagtccatcccctcaagctagaaaataaaaccaagagggtgtccttc
aagccccaggcaagtcaaaaagagagaagagagagctgggctgacacggagcagcaaact
agttcagctggggaaatcagtagtacttgctctcaagttcagaatagcactaatcctgct
ggacatcataatgtaaataacacaacagatacctcaatcaaagataagtctgacagtgat
aaaaaatctgacaaagatttagacaagtcacaagataaaggtggaggatggtccctttct
aaattgttgggatggaacaaatccaagcaggcagtgctacctgatgataaaaaccccact
attatatgggatgaaaataagaaaaagtgggtgaaccaagatggtgatgaggaggtgact
gcccctcctccccctcctcctaagagtgctatcagtggcccaggtgctccacctctcatg
atgacaagaggcggaccaagaaaatctcgttatgttaacactgaaaaagactcgagtaag
ggaatggcaggaggaatgcctgtaaatcttccaaattctatgctgcccccaatgccaggg
gcacccatgatcactggtggtccttccatgtctccaccagtaatggttccagcaccagtg
cagcttcaacaagggggccgagatactcctgacggtcttcaagcagcacaaggtgtcggg
caccaagagcagcagcaggcacctgtgccacaagtcacaccaactcttgcaccactacca
gatattgcccagatgaggagatcgcgatatatttctgaaagttccattgagctagaggat
gactggccaccagccaatactgagggaacatcgaatgatgggagtgaaggagctggattt
gtgccgatgataggcccaccaactggccaaccacagttctttaaccctgcccagtttaac
acgcctgttacatccaacgtcaaccaaactaggagacttggccctggaagacggtcattg
cctgcaaaacgacaggaattcacttga
DBGET
integrated database retrieval system
