Procambarus clarkii (red swamp crayfish): 123762553
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Entry
123762553 CDS
T07930
Symbol
TfIIB
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123762553 (TfIIB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123762553 (TfIIB)
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
123762553 (TfIIB)
Prokaryotic type
Archaeal type
TFB
123762553 (TfIIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
Sigma70_r4
BRF2-like_C_cyclin_rpt
HcyBio
Motif
Other DBs
NCBI-GeneID:
123762553
NCBI-ProteinID:
XP_045605025
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All DBs
Position
27:complement(28178804..28192674)
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AA seq
329 aa
AA seq
DB search
MAATEPRTPSTWPDVNMANRGKFNEVCCPHHPEAHLIEDYRAGDQICSECGLVVGDRVID
VGSEWRTFSNEKANTDPSRVGGPENPLLNGSDLSTIIGPGTGSASFDGFGGSKYQNRRSM
SSSDRALINAFREISNMADKINLPKTIIDRANVLFKQVHDGKNLKGRSNDAIASASLYIA
CRQEGVPRTFKEICAVSKISKKEIGRCFKLILKALETQVDLITTGDFMSRFCSNLGLPTS
AQKAATHIARKAVDLDIVPGRSPISVAAAAIYMASQASDDKRTQKEIGDIAGVADVTIRQ
SYKLMYPHAKELFPEDFKFSTPIELLPQL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaactgagccccggactccttcaacttggcctgacgtaaacatggcgaacaga
ggaaaatttaatgaagtgtgctgtccacatcaccccgaagctcatcttattgaagattat
cgagctggagaccagatatgctctgaatgtggcttagtggttggtgacagggtgatagat
gtaggatccgagtggcgtacttttagtaacgagaaagccaacactgatccgtctcgagtt
ggtggtccagaaaatccacttctcaatggttcagatctctctaccatcattggaccagga
actggcagtgcatcttttgatggatttggtggctctaaataccagaatcgaagatctatg
agcagttctgacagagccctcatcaatgctttccgggaaatcagcaatatggctgataaa
ataaacctgccaaagaccattattgacagagcaaatgttttatttaagcaagttcacgat
ggcaaaaatctaaagggccgcagcaatgatgccattgcttctgcatctctgtatattgca
tgcagacaggaaggagttcccaggacctttaaggagatctgtgctgtaagcaagattagt
aagaaagaaattggcagatgtttcaaacttatcttgaaagctttagagacacaagtggat
ctcattaccacaggggattttatgtcaaggttctgctcaaaccttggcctccccacatca
gcacaaaaggcagcgactcacattgcacggaaggctgttgatcttgatattgttccagga
agatcgcccatttctgttgctgctgctgcaatttacatggcatcacaagcatctgacgac
aagcggactcagaaagaaattggtgacattgcaggtgttgcagatgtaacaataagacag
tcctacaaacttatgtatcctcatgctaaagaacttttccctgaagacttcaaattctct
acgcccattgaattattgcctcaattatag
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