Procambarus clarkii (red swamp crayfish): 123762619
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Entry
123762619 CDS
T07930
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03020
RNA polymerase
pcla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123762619
09124 Replication and repair
03420 Nucleotide excision repair
123762619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123762619
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123762619
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123762619
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123762619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
123762619
NCBI-ProteinID:
XP_045605188
LinkDB
All DBs
Position
27:complement(19151917..19167779)
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AA seq
275 aa
AA seq
DB search
MPYANQPSLNLMELSEENIKFFIEDTDLSVANSIRRILMAETPTIAIDWVQLEENSTVLS
DEFIAHRIGLIPFTSDERIEQMQFSRDCSCTDYCPECSVEFTLDVKCQDDHTRQITTADL
KSSDARVIPVTSRHREDEASEYGESDDILIVKLRKGQSLRLRAYAVKGFGKEHAKWNPTS
SVAFEYDPDNAQRHTLLPKPEEWPKSEYSTLDENTPQAEFDPTAKPNKYYYNVESAGALK
PENIVLMGIAALKKKLSDLQNQLSMEAQSDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgctaaccaaccctcgctgaacctcatggaactctctgaggagaacatcaaa
tttttcatcgaggatacagatctaagtgtggccaacagtatcagacgaattcttatggct
gaaactcccactattgcaattgattgggtccaacttgaggagaattcaactgtcttgagt
gatgagttcattgcgcatcgcattggtctcattcctttcacatctgacgaacgcattgag
cagatgcagttctctagggactgctcatgcacagactactgcccagaatgttcggtagag
ttcactttagatgtcaagtgtcaggatgaccatacacgtcaaatcaccacagcagatctc
aagtcttcagatgccagagtaataccagtcacctcacgccaccgtgaagatgaggccagt
gaatatggtgaatctgatgacattcttatcgttaagcttcgcaagggtcagtcattaaga
ctccgagcttatgctgttaaaggatttggcaaggagcatgcaaagtggaaccccacaagc
agtgtagcctttgagtacgacccagacaacgctcagaggcatactcttctcccaaagcca
gaagaatggcccaagagtgaatactcaaccttggatgaaaatacaccccaggcagagttt
gacccaacagccaaacctaacaagtactactacaatgtggagagtgcaggagcgctcaaa
ccagagaatatcgtcctgatggggattgcagctcttaagaagaaactatcagatttgcag
aaccagttaagcatggaggctcagtcagatgcattggccatcaattaa
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