Procambarus clarkii (red swamp crayfish): 123762730
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Entry
123762730 CDS
T07930
Symbol
Snr1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
pcla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123762730 (Snr1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123762730 (Snr1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcla01009
]
123762730 (Snr1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123762730 (Snr1)
03036 Chromosome and associated proteins [BR:
pcla03036
]
123762730 (Snr1)
Protein phosphatases and associated proteins [BR:
pcla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123762730 (Snr1)
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123762730 (Snr1)
SWI/SNF complex
123762730 (Snr1)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123762730 (Snr1)
PBAF complex
123762730 (Snr1)
SWI/SNF complex
123762730 (Snr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
123762730
NCBI-ProteinID:
XP_069188353
LinkDB
All DBs
Position
27:3081678..3182469
Genome browser
AA seq
388 aa
AA seq
DB search
MALFTFKMAKTYGDKPVSFQLEENGEFWCIGSEVGNYLRLFRGSLYKKFPGMYRRSITND
ERKKLMELGLTQHVLASNISLLRASEVEDIIEGNEDKYKAVSVRQQQDPEAAAARAERTV
KKPAAPWVPTISNSSHLDAVPQATPINRNRIISKKIRTFPMCYDDLDPAQIHENSCQREE
LVPIRLDMEIEGQKLRDTFTWNKNEMLVSPEQFAELLCDDLDLNPLMFVPAISTAIKQQV
DQYPSQTIISEHSDTRIVVKLNIHVGNISLNDQFEWDMASPENTPEDFATKLCSELGLGG
EFVTAIAYSVRGQLFWHQRTYAFSESPLPCVEVPFRSQSEAEQWSPFLETLTDAEMEKKI
RDQDRNTRRMRRLANTTPGWDRRAKADI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtttacgttcaaaatggcgaagacgtacggcgacaagcctgttagctttcaa
cttgaggaaaatggggaattttggtgtattggatcagaggttggcaactacctgcgtctg
ttccgtgggtcattgtataaaaaatttcctggcatgtacagacgctccatcaccaatgac
gaacgaaaaaagttaatggaacttggtttaactcagcatgttctagcatcgaacatttcc
ctgttgcgagcatctgaggtagaggacatcattgaaggcaacgaggataaatacaaagct
gtatcagtccgtcagcagcaagacccagaggcagcggctgccagagctgaacgcacagtg
aagaaaccagctgctccgtgggttccaaccatttctaactcttctcatcttgatgcagtg
cctcaagcaactccaattaatagaaatcgtattatatcgaagaagattcgaacctttccc
atgtgctatgatgaccttgaccctgctcagattcatgagaattcctgtcagagagaagaa
ttggtgcccatccgattagatatggaaattgagggccaaaaactacgagacacttttact
tggaataaaaatgaaatgcttgtaagtccagagcagtttgcagagcttctgtgtgatgac
ttggacttgaatcctcttatgttcgtcccagcgatttcaactgctattaagcagcaggtt
gatcagtatccctcgcagactattatttccgaacattctgatacaagaatagttgtaaag
ctgaatatccatgttggcaatatttccctcaacgatcagtttgaatgggatatggcttcg
ccggaaaatacaccagaagattttgccaccaaattatgttctgaacttggtctgggaggt
gaatttgtaacagcaattgcgtattctgttagaggacagctcttctggcaccagcgtact
tatgctttcagtgaatcgcctcttccttgtgtggaagttcctttccggtcccaaagcgaa
gcagaacagtggtcgccatttcttgaaactctcacagatgctgagatggagaagaaaatc
agggaccaagacagaaacaccaggagaatgcggcgattggcaaatacaactccaggctgg
gatagaagagctaaggcagatatctga
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