Procambarus clarkii (red swamp crayfish): 123762979
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Entry
123762979 CDS
T07930
Name
(RefSeq) DEAD-box helicase Dbp80 isoform X2
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123762979
03015 mRNA surveillance pathway
123762979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123762979
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123762979
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123762979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123762979
NCBI-ProteinID:
XP_045605810
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All DBs
Position
47:18883215..18928738
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AA seq
473 aa
AA seq
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MGDDWAKAAEEQEAKDLVAKVESLNLPKVEDERIKEKVPSNDAEENISPAELSLMRKVMR
KGIKETKNNVEVLRKDPKNPLYCVKTFEELNLRKELLEGIYEMGFKLPSKIQEVSLPTLL
AEPPVNMIAQSQSGTGKTAAFALAMLSRIDTSRKCCQALCLSPTMELALQTLDCIKQMGN
KCKDITIRSAVKGESVSRGQKITEHIVIGTPGKVVDWVTKYKCLELRNCKVFVLDEADVM
IATQGHQDQSVRIHKQLPQNCQMMLFSATYVDEVVTFAEAIIKDPVTLRLKREEETLTNI
RQMYVECRNQDEKYEAIANIYTIPVGSAMFFCHTKQNANWLATRLKEDGHQVALLTGDLT
PDERVRVLLRFREGTERVLICTNVLARGIDVDTVNLVVNYDLPRLYGSKRADCETYLHRI
GRTGRFGKTGNAINIVDGEDDVRLLREIEEHFNIKIIKLDYNNIDEIEKLSED
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgactgggcgaaggcagccgaggaacaggaggcaaaagatctggttgctaaa
gttgagagcctgaatcttcccaaagttgaagatgaaaggattaaggaaaaagtgccctca
aatgatgcagaggaaaatatttctccagctgagctgtcactcatgaggaaggtgatgaga
aaagggattaaagaaactaagaacaatgttgaggtcttgcgcaaggatcctaaaaatccc
ctctattgtgtcaagacttttgaagagcttaacttacggaaggagctcttagaggggata
tatgaaatgggatttaagcttccctcaaagattcaagaagtctcgcttccaactcttcta
gctgaaccgccagtcaacatgatagctcagtcccagtcaggcacaggcaagacagcagca
tttgccctggccatgttgagccgcattgacacctccagaaaatgttgccaggctctgtgc
ttgtcaccaactatggagctggcattgcaaacactggactgtatcaagcagatgggtaat
aaatgcaaggacatcaccattcgctctgctgttaaaggagaatcagtttcccgtgggcaa
aaaatcactgaacatattgtaattggcaccccagggaaggtagttgactgggtcaccaaa
tacaaatgtcttgagctacgtaattgcaaggtttttgtacttgatgaagctgatgtgatg
attgctactcagggtcatcaggatcagtctgtccgtatacataagcaacttccacaaaat
tgtcagatgatgttgttttcggccacgtatgttgatgaggttgtcacttttgctgaagcc
attattaaggatccagtgacactccggttaaagagggaagaagaaacgctgacaaatatt
agacagatgtatgtcgagtgtcgtaatcaggatgaaaaatatgaggctattgccaacatc
tacacaatcccggtgggcagtgcaatgtttttctgccataccaagcagaatgctaattgg
ttagcaacacgtcttaaggaagatggtcaccaagtagcgctactcactggtgacctaaca
cctgacgagcgagtccgagtgttacttcgcttccgcgagggaactgaaagggtgctcata
tgtaccaacgttctggcccgagggattgacgttgacacagttaacttagtggtcaactat
gatcttcctcgattgtatgggtcgaagagggcagactgtgagacgtatttgcatcgaatt
ggccgtactggtcgctttggcaagacaggcaatgcaattaatattgtagatggtgaggat
gatgtgcgattactaagagaaattgaggagcacttcaatataaaaattatcaagctggac
tacaacaacattgatgaaattgagaagcttagtgaggactaa
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