Procambarus clarkii (red swamp crayfish): 123762993
Help
Entry
123762993 CDS
T07930
Name
(RefSeq) sodium-dependent proline transporter isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123762993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcla02000
]
123762993
Transporters [BR:
pcla02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123762993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
123762993
NCBI-ProteinID:
XP_069158251
LinkDB
All DBs
Position
47:24567082..24610432
Genome browser
AA seq
670 aa
AA seq
DB search
MPSYSYKVNDPISPISYKQRSTAPGASGPPDHTTHTKDYTNGASDERWRQNYVPTPYESY
KSNGSGSTQTAEGDTVGEESDRGQWGSKAEFILSCVGLSVGIGNVWRFPYLAYENGGAAF
LFPYIILLVLIGKPMYFMETALGQYSQLGPMNVWRCAPVMQGVGFAMVILSLITAIYYNQ
LMAYSLYYMFGSFASEVPWARCHPDWADSNCFDVDGLYPCPRYNLTAPTDTVNCTTRNES
SAQQFWRNGVLRLDKNGLQEFGNIGTIQWDLTLCLLLSWIIVFLCLVKGVRSSGKVVYFT
ATFPYVILIALLIVGVRLEGASEGLRYLFVPRWAELLNVTVWRKAAEQMFYSLSVSWGGL
IMFGSYNKFRNKVHIDAFVVSSLDFITSLIASVAIFSVLGAMSSDLGIDIRKLAASGPGL
AFIAYPEAISRTLPVPQLWAVLFFFMLFTLGLDSEFAFLETVLTALCDSVPRLRNHKVVI
TFVICASCFLLGIPLCATLGPYIFYLLDSFGGGIGVLLIAISELVALHWVYGVHRFSEDL
KFMLGYSPSIFWKVCWVFIDPIVLMILFIYSVITWEDPVYNNIEFPAWGIGIGWLLAGIS
VGMIPLVFVVRVLKMLVTGKIRDVFKPATSWGPGCPEARRELLAIQSTFDMNETKYGIDN
PAMDTRYYPQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgccatcatactcttacaaagttaacgacccgatcagtcccatctcctacaagcagagg
agcacagcgccaggcgccagcggcccgccggaccacaccacccacactaaggattacacc
aatggcgcctctgacgagcgctggcgccaaaactacgtccccacgccctacgagtcctac
aagagtaatggctccgggtcgacgcagacggcggagggcgacactgtaggggaggagagt
gaccgcggacagtgggggtccaaggctgagtttattctctcctgtgttggtctctctgta
ggcatcggcaacgtctggcgtttcccctacctcgcctatgagaacggtggagcggccttc
ctgttcccgtacatcatcctcctggtgctgattggcaagcccatgtacttcatggagacc
gccctcggccagtacagtcagctcggccccatgaacgtctggcgttgtgctccagtcatg
cagggcgtgggatttgccatggtaatattgtctcttattactgctatatactacaaccag
ctgatggcatattccctctactacatgtttggcagctttgcttcagaggtgccgtgggcc
agatgccaccctgactgggctgactccaactgtttcgacgtggacgggttgtatccgtgt
ccacggtacaacctcacggctcccaccgacaccgtcaactgcaccaccaggaacgagtcc
tcggctcaacagttctggagaaatggcgtgctgcgtctagacaaaaatggccttcaagag
tttggtaacattggcacaattcagtgggacctgacgctgtgtttgttgttgtcgtggatc
atagtgttcttgtgcctggtgaagggtgtgaggtcttctggtaaagtggtctactttact
gctaccttcccctacgtcatcctcatagctctccttattgttggcgtcaggctggaggga
gcttcagagggtctgaggtacctgttcgtgccccggtgggcggagctgctgaacgtgacg
gtgtggaggaaggcggccgagcagatgttctactccctctccgtctcctggggaggactc
atcatgttcggatcatacaataaatttaggaacaaggttcatatcgacgccttcgtggtg
tcctccttggacttcatcacgtcactcatcgcctccgtggccatcttctccgtgcttggt
gccatgtcctctgacctcggtattgacatcaggaagttggctgccagtggtcccgggctg
gcgttcatagcgtaccctgaggccatctcccgcaccctgcccgtgccgcagctgtgggct
gtactcttcttcttcatgctcttcacactcggactcgactcggaatttgcgttcctggag
actgtgctgacggctctgtgcgactctgtgccgaggcttcgcaatcacaaggtcgtcatt
accttcgttatctgtgcctcctgcttcctcctgggcatcccactctgtgccacgttaggg
ccgtacatcttctacttgttggacagcttcggaggcggcattggtgtactgcttattgcc
atctccgagttagttgcccttcactgggtgtatggcgtccaccgcttcagtgaagacctc
aagtttatgttgggctacagtccgtccatattctggaaggtgtgctgggtcttcatcgac
cccatcgtcctcatgatattgttcatctactctgtgatcacctgggaagatcctgtctac
aacaacattgaatttccagcttggggcattggtattggttggctgttggcgggtatctct
gtgggcatgatacctctggtgtttgttgtcagagtcttgaagatgctcgtcactgggaaa
atacgtgatgtgttcaagccggccaccagctggggacccgggtgcccagaggccaggaga
gagctgctggcaattcagtccacatttgacatgaatgagaccaagtatggtatagacaac
ccagccatggacaccagatattaccctcagtga
DBGET
integrated database retrieval system
