Procambarus clarkii (red swamp crayfish): 123763000
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Entry
123763000 CDS
T07930
Symbol
Ogg1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123763000 (Ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123763000 (Ogg1)
Enzymes [BR:
pcla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
123763000 (Ogg1)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
123763000 (Ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Kinesin_assoc
Motif
Other DBs
NCBI-GeneID:
123763000
NCBI-ProteinID:
XP_045605858
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All DBs
Position
47:24302825..24309648
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AA seq
380 aa
AA seq
DB search
MSGASRVYQVACRPCELRLDITLQCGQSFRWREANPGKWRGIIGNKVWTLSQDDSHIAFQ
AHTSEGVSENHNNALKAASSSQKKRRVSVTKAATRENSANGDFSPAQKEVKDCTKTSSNI
VDNLSDNCEEELKKMLRNYFQLDISLETLYSVWSKADGNFAAVSPEFPGIRILNQDPVEN
VFSFICSSNNNIQRITLLVERLCQLYGSPLATVDGITWNSFPRVSSLAAPGVEEKLREHG
FGYRAKFIHKSAQMIMKKGGDAWLHSLKSLPYQECHKELMHLHGIGAKVSDCICLMSMGH
LNAIPVDTHVFQIAARDYLPHLRTCKTVTDKVYREIADHFRSVFGEYAGWAHSVLFSADL
KKFETLKTEKKVKKNVRTSR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgcgtcgagggtgtaccaggtggcgtgtagaccatgtgagctgcgcctcgac
atcaccctccagtgtggacagtccttcagatggcgtgaagcaaatcctggaaagtggcgt
gggataatcggaaataaggtatggacgctttctcaagatgactcgcacattgcattccaa
gcccacacctctgagggtgtttctgaaaatcacaataacgctttgaaggctgcatcttca
agccaaaagaaacggagagtatctgttaccaaagctgcaacaagggaaaactctgcaaat
ggagatttttcaccagcacagaaagaagttaaagattgtaccaaaacatctagtaatatt
gttgataatttaagtgataattgtgaagaagaactgaagaaaatgttaagaaattatttc
cagttggacatctctctggagacactgtactctgtatggtccaaagccgatggtaatttt
gctgctgtctccccagagtttcctggtatacgaatattgaatcaagatccagttgaaaat
gtgttttcttttatatgctcatcaaataacaatattcagaggatcactctgctggttgag
aggttgtgtcaactgtacggctctcctctggctactgtggatggcatcacctggaactcc
ttccctagggtgtcatctttggcagctccaggagtggaggaaaaattgagagaacatggg
tttggatacagagccaagtttatccacaagtcggcacaaatgataatgaagaaaggtggt
gatgcatggcttcactccctgaagtcacttccctatcaggagtgccacaaagagttgatg
catctccatggcattggtgccaaagtgagtgactgcatctgccttatgtccatgggtcac
ttgaatgccattcctgtggacacacacgtgtttcagatagctgctcgagactatctccca
catctacgcacttgcaaaactgttactgataaagtttaccgagagattgctgatcatttt
cgcagtgtatttggagaatatgctggttgggctcattcagttttatttagtgccgatctg
aagaagtttgagacactgaagactgagaagaaagttaaaaaaaatgtccgcacttcaaga
tga
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