Procambarus clarkii (red swamp crayfish): 123763217
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Entry
123763217 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123763217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123763217
03036 Chromosome and associated proteins [BR:
pcla03036
]
123763217
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123763217
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
123763217
Chromatin remodeling factors
BAF complex
123763217
PBAF complex
123763217
GBAF(ncBAF) complex
123763217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
QLQ
ResIII
HDA2-3
BRK
DEAD
TFIIF_alpha
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
123763217
NCBI-ProteinID:
XP_069159136
LinkDB
All DBs
Position
49:16962533..16993958
Genome browser
AA seq
1613 aa
AA seq
DB search
MSAQSPNPGSAASPMGPPQQSLSPMPPPQATSPAVGPPQAPSPMGPPQAPSPMGPPVMSP
GPGVPPTQQGPPGGPGMSPQGGPSPHHSYPQGPQGGQGWPQTAGSYPNSYPPQPQSQQGS
SMGPNSHHPSQGPPGGPSGGGLPPPSGGGPNGPSPSGGSFQQENLNALQKAINTMEDKGL
QNDPRYTDLVNMRAKYGNMNMGPPPPGSGSTSGGSVPPGPPSGPGYGPPGAGVPDAQRAG
LLNPSQMHQLRAQIMAYRCIARNQPVPSHVSALAQGRRAEQDPTRPPGPGLPGPQGPPSG
PPSGPPTGPPAGPPTGPPTGPPTGPPTGPPGVQGPPGPPGPPGPPSMQYPRHPGPMPGVR
PPYNGTGPSQTPPPPSGVMSSQPVPTGPVPGTTPRPQVPPAAVGTTPVPTAGGKTSRVTP
ITKPSGVDPLILLQERENRLAARIAHRIEELSGLPATMAEDLKTKAQIELRALRLLNFQR
QLRAEVVSCNRKDTTLETAINIKAYKRTKRQGLREARITEKLEKQQKLEAERKKRQKHQE
YLNAVLQHGRELKEFHRQNNQKISKLNKSLILHHMNAEREKQKEQERIEKERLRRLMLED
EEGYRKLIDEKKDKRLAYLLTQTDEFIANLTEMVKAHKEDQRLKHREERKKAREERRRAR
EAIADNGEEGDNQKRHIPVMESATGAIVCGLQAPLEENLEAFLTANPGWEILPEEDTESS
DEDESKVEKEKVKEPEYEDGNPREVVFKKAKVEDDEYKDASGEKNYYSIAHTIKETVTEQ
AKMMVNGLLKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALLTYLIETKKNNGP
YLIIVPLSTISNWALEFEKWAPTVQVVTYKGSPQVRRIVQSQMRATKLNVLLTTYEYIIK
DKXVLSKLRWKYMIIDEGHRMKNHHCKLTQTLNTFYNAPHRLLLTGTPLQNKLPELWALL
NFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKREVE
AQLPDKVEYIIKCEMSGLQHVLYRSMQTRGVMLCAEDKKGQKSNTKALMNTIMQLRKLCN
HPFMFQHIEEAYCNHTGFAGGIVQGPDLYRASGKFELLDRILPKLKTSDHRVLLFCQMTQ
LMTIMEDYLMYKGFKYLRLDGMTKSEDRGELLRLFNTSREYFLFLLSTRAGGLGLNLQSA
DTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNTVEERILAAARYKLNMDEKV
IQAGMFDQKSTGSDRRQFLQAILSNDNEDDEEEDEAPDDETINQMIARGEDEFEIFQKID
DERKKESTRPRLMAEDELPEWMLREEDSEEIEEEEPEELGDRRARSKKEVDYTDSLTEKE
WLRAIGAMEEEEEEVTSNKNKRGSKGKRKRQDEMDNDDDPKPKKRGRPAREKPGPKNKRL
IRQLKRLMDIVIKYEDSDGRVLSEPFMKLPSRRELPDYYGIIKRPMDICKILSKIEEGRY
EDLNELETDFMLLCRNAQEYNEEASIIYEDSIVMQSVFVNARERIETEADNLPEEDEEED
EEEEEEEDSRGKKGKKSKGDKSRGRRKRVKYADDSDDDDEDDDDDDVSKKEPE
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcaaagtcccaatcctgggagtgcagcatccccaatgggtccgccccagcag
tccctttctcctatgcctccaccccaggctacatctccagccgttgggccacctcaggct
ccatctccaatgggtccaccacaggcaccatcacccatgggtcctccagtaatgtcacca
ggtcctggtgtaccaccaacacagcagggacctccagggggccctggcatgtcacctcag
ggtggaccaagccctcaccactcttaccctcagggtccacaaggaggccagggttggcca
caaactgctggttcatatcccaacagttatcctccacagcctcaatcacagcagggatca
tcgatgggccctaacagtcaccacccttcccagggtcctcccggtggcccttcaggtggt
ggactgcctccaccaagtggtggtggaccaaatggtccgagtccaagtggtggtagcttt
cagcaggagaaccttaatgctttgcaaaaagctatcaacacaatggaggacaagggttta
caaaatgatccacgttatactgatttagttaacatgagggctaagtatggtaatatgaat
atgggtccaccaccaccaggcagtggttctacaagtggtggtagtgttccaccaggccct
ccaagtggacctggatatggccctcctggtgctggggtccctgatgcacaaagagcaggt
ttgctaaatccttcacaaatgcatcagcttcgggcccaaataatggcctatcgttgcatt
gctcgtaatcaaccagttccaagccacgtgtctgctcttgctcagggtcgccgggctgaa
caagaccctactcggccacctggacctggtcttcctggaccacaaggacccccaagtgga
ccaccaagtggaccaccaactggccctccagcaggtcctcctactggccctccaactgga
ccaccaactggacctcccactggacctcctggtgttcagggtccaccaggcccaccagga
ccccctggaccacccagtatgcagtatccaagacaccctggaccaatgccaggggtgcgg
ccaccatacaatggaacaggcccatcacagacaccacccccaccatctggtgtcatgagc
tcccaacctgtaccaactggacctgtacctgggaccaccccaaggcctcaggtgcctcca
gcagctgttgggacaacccctgtgcctactgctggtggcaaaacgagccgtgttactcct
attactaagccctctggggtggatcccttgatacttctacaggagagagaaaacagatta
gctgcacgtattgctcatcgaattgaagaattgagtggccttccagcgacaatggcggaa
gatttaaaaacaaaagctcagattgagcttcgagcattacgcttactcaatttccaacgc
caattaagggccgaggttgtaagctgcaatcgaaaagatacaactttagaaaccgctatt
aatataaaggcatacaagagaaccaaacggcaaggtctgagagaagctcgtattactgaa
aaactagaaaagcaacagaaattagaggccgagcgaaagaagcggcaaaagcaccaagaa
taccttaatgcagtgctacagcatggtagagaactgaaggagttccatcgccaaaataat
cagaagattagtaaattaaataagtctctcatactgcaccatatgaatgctgagagagag
aagcaaaaggaacaggagcgcatagagaaggaacggttgaggcgcctcatgctggaggat
gaggaaggctatcgtaaattgattgatgaaaagaaagataaacgtttagcgtaccttctc
actcagactgacgagtttattgccaacctgacagagatggtcaaagctcataaagaggat
cagcgactgaaacatcgagaagagaggaagaaagctcgtgaggaacgtcgtcgtgcccgg
gaggccattgctgataatggtgaagagggcgacaatcagaagcggcatattcctgttatg
gaatcggcgaccggagccattgtttgtggcttacaggctcctctggaggaaaatcttgaa
gcatttttgactgccaatcctggctgggaaattctacccgaggaagatacagagtcgtct
gatgaagatgaatcaaaagtagaaaaggaaaaagtgaaagagcctgagtatgaagatggc
aatcccagggaggtggtgttcaagaaggccaaggtggaggatgatgagtacaaagatgca
tcgggagagaagaactattactccatagctcacaccattaaggaaactgtaacagagcaa
gccaaaatgatggtcaatggacttctcaaagaatatcaagtgaagggtcttgagtggctt
gtgtccttgtataacaataatcttaatggtatcctggctgatgagatgggcctgggaaaa
actatccagactattgcacttctcacatacttaattgagaccaagaagaataatggacca
tatctcatcattgtacccctctccaccatatctaattgggctcttgagtttgaaaaatgg
gctccaactgttcaggttgtgacttacaaagggtcacctcaggttcggcggattgttcaa
agtcagatgagagccacgaagctcaatgttttgctcaccacatatgaatatattataaag
gataagncagtgttatccaagttgcgatggaaatacatgataatcgacgagggtcaccgc
atgaagaaccaccattgcaaacttacacagacactgaacacgttctacaatgcaccacat
cgcttattgctgacgggaacaccacttcagaacaagctgccggagctatgggctcttctt
aacttccttcttccatccatctttaaatcttgctctacatttgagcagtggttcaatgct
ccctttgcaactactggtgaaaaggttgaattaaatgaagaagaaactatcttgatcatt
cggcgtctgcataaagttcttaggccatttttactacgtcgactcaagagagaagttgag
gcccaattaccagacaaggtggaatacatcatcaagtgtgaaatgtcgggtctacaacat
gttttataccgctccatgcagacaaggggagtcatgttgtgtgctgaagataagaaaggt
cagaagagtaataccaaggctctcatgaacaccattatgcagcttcgtaaactttgtaac
catcccttcatgttccaacacattgaggaagcctattgcaatcatactggatttgcaggt
ggcattgttcagggaccagatctataccgtgcatctggcaaatttgagcttctagaccgg
atcttgcctaaactgaagaccagtgatcaccgagtgctgctcttctgccagatgacacag
cttatgactattatggaggattacctcatgtataaaggcttcaaatacttgagacttgat
ggtatgactaaatcagaagaccgtggtgagcttttacgtctattcaatacatctagagaa
tatttcttgttcctgttgtcgacccgtgcaggtggtttaggactgaacctccagtctgcc
gacacagttatcattttcgattcagattggaatccacaccaggatcttcaggcccaagat
cgtgcccatcgtattggccagaaaaatgaggtgagagtgttgcgtctgatgactgtgaac
accgttgaagaacgtatcttggcggctgctcggtataaactcaacatggatgagaaggtt
attcaagcgggtatgtttgatcagaagtctactggatctgatcgacgacagttccttcag
gctattctttccaatgacaatgaagatgatgaagaagaggatgaagccccagacgatgaa
actattaatcagatgattgctcgtggagaagatgaatttgaaatctttcagaaaattgat
gacgaaagaaagaaggaatcaactaggccacgtcttatggccgaggatgaattacccgag
tggatgttgagggaggaagattcagaagagatagaagaagaggaacccgaggagttggga
gatcgtcgggctcgttctaagaaggaagtagactacacggatagtttgacagaaaaagaa
tggcttcgtgctattggggctatggaagaggaggaggaagaggtcactagcaataagaat
aagaggggctctaaaggaaagagaaaacgacaagatgagatggataatgatgacgaccct
aagccaaaaaaacgtggacgtcctgctagggaaaaaccaggaccgaaaaataaaaggcta
attcgtcaactgaaacgtctcatggatatagttataaaatacgaagacagtgatggacga
gtactgagtgaacccttcatgaagttaccatctcgccgtgagctgcccgattactatgga
ataattaagagaccaatggatatatgcaagatcttatctaaaattgaagaaggaagatat
gaagacctgaacgaactggagactgactttatgctcctgtgtcgcaatgcccaagagtac
aatgaagaggcttctatcatctatgaggattccattgtaatgcagagtgtctttgttaat
gctcgcgagcgtatagaaacagaggctgataatctccccgaggaagatgaggaagaggat
gaagaggaggaggaagaggaagacagtagaggaaagaaggggaagaaaagtaagggagat
aaaagcagagggagaaggaaaagagtaaaatatgccgatgattccgatgatgatgatgag
gatgatgatgatgacgatgtgagtaagaaagaacccgagtga
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integrated database retrieval system
