Procambarus clarkii (red swamp crayfish): 123763546
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Entry
123763546 CDS
T07930
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123763546
03015 mRNA surveillance pathway
123763546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123763546
03041 Spliceosome [BR:
pcla03041
]
123763546
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123763546
Spliceosome [BR:
pcla03041
]
Complex C
Other components
EJC/TREX
123763546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
123763546
NCBI-ProteinID:
XP_045606645
LinkDB
All DBs
Position
52:33200282..33213951
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AA seq
988 aa
AA seq
DB search
MAALTGLSLVTTIESEIERARNDLKGVDESLRRLTGRDFNDPSQRADLRRIRLSSGRGDD
EPPAKRRPPGGVFARLGAVVLDKQHPDSRGRPRGDLRGEIRGDHRGVDPRVEAHGDLRAE
VHPEIRGRRVQEVVDSDEKIPKPSLASSVARPQSDTKSRNEAAAELTKDRASRDRNRRMF
GALLGTLKRFKNDEAKQKDKEEQRAAIERKLEEKGRAEKEELRRERQELFNQRKERQAQI
RRLTVKMARVKEHEVWEAHQMKLAKFIRTESSLPIFWLPRLHNSRTTNLVRATHDIIMRE
LEQDRLRMKEELEEILGGRAEEDQGEEGRDAAEGGEEEETYVRRGVRSEVNRQGEGGGND
TLDNCPDLLDYEAEEGELVYDEADLSGKDDDDTERMVVQVDGRGEGGRKVEIVASQAEVG
GESNSIAEGGNDSEKENEGRQKEKDRSREERHREKDKSKDRERDRKKDRGRERDKEKDRH
KEGEKDRVRERFSGRDKEKERLRDTGKGSEKEKFKERGRTKDLTKSLDKSPENESDLTTT
IVHIKIEKEDETNPAFTRPILKIIKEEKPDKPQSTIKKGENAEGNAPAVAITEPLPPLPP
PVSELPLPPDCAPLSPTPLPPSPTFLPPSPTPLPPSPTYHPLSPTLPPSPSLPPLSLTPV
PPSPPAPSSPNIATSLSHPPNTVPEISKINDKGEDGEELEDGEEANFDSVADVSMPETSA
DHEDKNPHLESINMPDEKPQPELKSEVAKKSSKVKQQREDKKKGEKSKKKVNKKKDRLGK
KKDSGSSDSSSDDSSSDTSSESSDSDSSDSDSSSSSSGSSSGSSSDSESDSSSSSSSGSD
SDSDHTKKKRKKKRGRMSRSDDSSSDSELQEKKKKIRKIGERKKNASESGKSSKSKVKVE
RGDDKTKKELGKKERHKDKDGKGKEMHKLKEADRGRERDAGHRREREWAKKGGISRSRER
KREKSRERRRDRSRSRDKDRRGSRKEKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctaacgggtctctccctcgttactaccattgagagtgaaatagagcgagcc
cggaatgacctcaagggtgtagatgagagtctgcgcaggctgacaggccgcgatttcaat
gatccaagccaacgtgcagatctccggagaatccgtctctcatcaggacgaggcgatgat
gagcctccagctaagcgaagaccccctgggggggtctttgctaggttgggggctgttgtg
cttgacaagcagcatcctgactcaaggggccgacctcggggtgatctgaggggagaaatc
cgaggcgatcaccggggcgttgatcccagggtagaggcacatggcgatttaagagcagag
gtacacccagaaattcgtggtaggcgggtccaggaggtggttgacagtgatgagaagatt
ccgaagccatccctggcgtcgtctgtagctcgtccacagtcggacacaaagtctcgtaat
gaagctgccgcagaactgacaaaggatagagcttcacgagacagaaatcgccgtatgttt
ggtgctttgcttggtactctgaaacggttcaagaacgatgaagccaagcaaaaagataag
gaggaacagcgtgctgctattgagagaaagctagaggaaaaggggagagcagaaaaagaa
gagcttagacgtgaacggcaggaacttttcaatcaaaggaaggagaggcaagctcaaatt
cgacggctcaccgtcaagatggcccgagtaaaggagcatgaggtttgggaggcccaccag
atgaagctggcaaaatttatacgcaccgagtcatctctacccatcttctggctgccacgc
ttgcataactccaggaccaccaaccttgtgcgggccacacacgacattatcatgcgtgaa
ctggagcaggatcggctgcgcatgaaggaggaactggaagaaattcttggaggacgtgcg
gaggaagatcagggcgaagagggcagggatgctgcggaggggggggaggaggaggagacc
tacgttcgcaggggggtccgctcagaggtcaacaggcagggggaggggggtggcaatgac
actcttgataactgtccagatttgttagattacgaggctgaggagggagagctagtgtat
gatgaggcagacctgtcaggtaaggatgacgacgacactgagcgtatggtagtccaggta
gatgggcgaggggaggggggaagaaaggttgaaattgttgcaagtcaggcagaggtggga
ggggaatctaacagtatagcagaagggggtaatgacagtgagaaagagaacgagggtagg
cagaaggaaaaggataggagtcgagaggaaaggcacagagaaaaggataagagtaaggat
agagagagggataggaagaaagataggggaagagagagggacaaggaaaaagataggcac
aaagagggagagaaggatagggttagagaaaggtttagtggaagagataaggaaaaggag
aggttaagggataccggtaaagggtcagaaaaggaaaaattcaaggaaaggggtagaact
aaagacttgactaaatcattagataaatcgccagaaaatgagtccgacctaaccactact
atagtgcacataaagatcgaaaaagaggatgaaacaaacccagcattcacgaggccaata
ttgaagatcattaaggaagaaaaaccagacaaaccgcagagtacaataaagaagggtgaa
aatgcagaaggtaatgcacctgctgttgccattacagaacctctaccacctcttcctccc
cctgtttctgagcttcctctacctcctgactgtgccccactttccccgacacctctcccc
ccttccccaacatttctcccgccttccccgacacctcttccaccttccccgacatatcac
ccactttctccaactctcccaccttctccatctcttcccccactttctttaactcctgtt
ccaccttcacctcctgccccaagctcccctaacattgctacttcattgtctcatcctcct
aacactgttccagaaatatcgaaaataaatgacaaaggtgaagatggcgaagaactggaa
gatggtgaggaagcaaattttgattctgttgcagatgtaagtatgccagaaacatctgct
gatcacgaggacaaaaatcctcaccttgaaagtattaatatgccagatgagaagccacaa
ccggaattgaaatctgaagttgccaagaaatcttccaaagtcaaacagcaaagggaagat
aaaaagaagggagaaaaatccaagaaaaaagttaacaagaaaaaagacagactaggtaaa
aagaaagactctggctcgtcagacagtagcagtgacgatagcagtagtgacacgagtagt
gagagtagtgatagcgatagttcagactctgacagttcctcgtcttcgtcgggatcatct
tctggttcttcctctgattccgagagtgactcgagctccagctccagctcggggtcggat
tcagactctgatcatacaaaaaagaagaggaagaaaaagagggggagaatgtctaggagt
gatgatagcagtagtgacagtgagttacaggagaaaaagaaaaaaattaggaaaattgga
gaaaggaaaaaaaatgcaagtgaaagtggaaagtcttctaaaagcaaagtaaaagtagaa
cgaggtgacgataaaaccaagaaagagttaggaaagaaagagaggcataaggataaagat
ggaaaaggaaaggaaatgcataaacttaaggaagcagacaggggtagagaaagagatgct
ggccatcgaagggaaagggaatgggctaagaagggtggtataagtagaagtagagagagg
aagagagagaagagcagggagcgaaggagggataggagtagaagcagagataaggataga
aggggaagtaggaaggaaaagcgatag
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