Procambarus clarkii (red swamp crayfish): 123763646
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Entry
123763646 CDS
T07930
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03030
DNA replication
pcla03420
Nucleotide excision repair
pcla03430
Mismatch repair
pcla03440
Homologous recombination
pcla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123763646 (RPA1)
03420 Nucleotide excision repair
123763646 (RPA1)
03430 Mismatch repair
123763646 (RPA1)
03440 Homologous recombination
123763646 (RPA1)
03460 Fanconi anemia pathway
123763646 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123763646 (RPA1)
03032 DNA replication proteins [BR:
pcla03032
]
123763646 (RPA1)
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123763646 (RPA1)
Transcription factors [BR:
pcla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123763646 (RPA1)
DNA replication proteins [BR:
pcla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123763646 (RPA1)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123763646 (RPA1)
MMR (mismatch excision repair)
123763646 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
123763646 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
AbiJ_NTD4
CDC24_OB3
IBR
GDH2_N
PLATZ
Motif
Other DBs
NCBI-GeneID:
123763646
NCBI-ProteinID:
XP_045606858
LinkDB
All DBs
Position
52:complement(24047978..24062402)
Genome browser
AA seq
601 aa
AA seq
DB search
MTGLSTGVIADIIEGAHPENPVLQILTMKRIPSGAQERYRLLVSDGQWSSSFAMLATQLN
SKVATGEISNNCIIQMNRYVCNTVQDNKKVLIILDLTVQQSGEDVGIKLGEPVSYDPNKS
RAQQQPQQPSRPMPSMAATSAPSPRNPLGQRNTPNLGVSPAKTPSGGNVHPIASLTPYQN
KWTICARVSNKSAIRTWSNSRGEGKLFSMDLLDESGEIRATAFNEQVDKFFDLIEINKVY
FITSATLKSANKQYSNLNNDYEMSFNKMTEITPCHEVTAIPAMQFNFVPLDQLESLEKDN
ILDVIGVCKETMELSTIQQRTTGRELKKRDIQLVDDTNREVRLTLWGTTAESFDGSQQPI
LAVKGARLSDFNGRSLSLLSSSSFQINPDIREAHKLRGWFDNGGNNSETINLSNQRSTGG
MGTNFKVFSEAKLENLGSAADVADYYTNKATIVLMKKENSLYTACPTESCNKKVIDMNNG
MYRCEKCNREFDTFSWRLLLQANVADFTDNQWVTVFQDQAETLLGVTAQELGSMRENNPE
GYQNVFTAAAFQSYNFKFRVKMETYNDESRLKCTVVACTPLDPKEYNRRLISEIKQMSGQ
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgactggcttaagcacaggagtgatcgccgacataattgagggggctcatccagagaac
ccagttcttcagattttgaccatgaagcgcatccctagtggtgctcaagaacgataccgc
ctgctggtgtcggatggccagtggtcaagcagcttcgctatgctagccacacagctcaac
agcaaggttgccactggagagatttccaataactgcataatacagatgaaccgttatgtt
tgtaatactgttcaggataacaagaaggtgctgatcattcttgatttaacggtgcaacaa
tctggtgaagacgtgggcatcaaactgggagaaccagtgagttatgatcctaacaaaagc
agagctcaacagcagccgcagcagccttctcgaccaatgccttccatggcagccactagt
gccccttcaccacgtaatcccctaggacagcgcaacacaccaaacctaggggtgtcccct
gcaaaaactccatctggtggaaatgttcatccaattgcttctcttactccataccaaaat
aagtggaccatatgtgctcgagttagcaacaagtcagctattcgaacatggtccaactct
aggggtgaaggtaaacttttctccatggatcttctcgatgaatctggagaaattcgtgca
acagcttttaatgaacaagtggacaaattctttgatttgattgagataaataaagtttac
ttcattacaagtgccaccctcaaatctgctaacaaacagtactcaaacctcaacaatgat
tatgaaatgtctttcaataagatgactgagataacaccctgtcatgaagtaacggcaatc
cctgctatgcagttcaactttgttcctttggatcagcttgagagtttagaaaaagataat
attttggatgttattggagtgtgcaaggaaacaatggaattaagcactatccagcagaga
acaaccggccgtgaactaaagaagagggacatacagcttgtagatgacacaaatagagaa
gtacgtttgacgttgtgggggactacagcagaaagctttgacggatcccagcaacctatt
ctagctgtgaagggagccagattgtcggatttcaatggacgttctctgtcactgttatcg
tcatcttcatttcagattaaccctgacattcgggaagctcacaagttgaggggatggttt
gacaatggtggaaataattctgagacaattaatctttccaaccaaagaagtacaggaggt
atgggtaccaacttcaaagtattttctgaagccaagcttgaaaatttgggaagtgctgct
gatgttgctgactattatacaaataaagcaactattgttttaatgaaaaaggaaaattcc
ctctatactgcttgccccactgagtcatgcaataagaaggttattgacatgaacaatggc
atgtacaggtgtgagaagtgcaacagagagtttgatacattctcctggcgacttttgctt
caagccaacgttgcagacttcacagacaatcagtgggtaacagtgttccaagatcaggct
gaaactctgcttggagttacagcccaagaactgggttccatgagagagaataatcctgaa
ggttaccagaatgtcttcaccgcagctgcattccagagttataattttaagttccgtgtc
aagatggagacatacaatgacgagagccgtttgaagtgtacagtagttgcgtgcacaccg
ttggatccaaaagaatacaatcgtcgtctaatttcagaaataaaacaaatgtcgggtcaa
gcttaa
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