Procambarus clarkii (red swamp crayfish): 123763883
Help
Entry
123763883 CDS
T07930
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123763883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123763883
03012 Translation factors [BR:
pcla03012
]
123763883
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123763883
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123763883
Translation factors [BR:
pcla03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
123763883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
AAA_14
AAA_16
ABC_tran
NACHT
TsaE
NB-ARC
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
123763883
NCBI-ProteinID:
XP_069186179
LinkDB
All DBs
Position
23:30980699..31059046
Genome browser
AA seq
1095 aa
AA seq
DB search
MLPRHRWASQGLGWVCPTLTSLYSYLTWIRLQGGGSMYGRRGSGNYQDGGSRGGGGWRGD
KYRRGGRGGGDGGGRGRGGGKGGRGGSRGGPPPGLRGKEIGLWYARQSRERQEKDERYLP
SISMNASQVRDVGRMLDSFDGGNNSTKNVSSLEGACSTALPSDDLGQEWDHRISFIMKQE
FDEDDTGGENSGEGFEGEIDHFSNPDAWIHDTTQKRKGISEGDQEKRPRGETLARRLDNI
GESDFKQAYMANVHGNQLRDSGGLGALKGDQLGLIRREDIDKRLFEDMVEQQNSKVYQQM
LEVRKRLPSYKMRDEILDKIGSNQVVVLSGETGCGKTTQVAQFILEEAITDGQGSTCRIV
CTQPRRISAISVSQRVADERGEKLGKSVGYQIRLEAVLPRTEGSILFCTTGIVLQWLQSD
PTLAKVSHLVLDEIHERDMLSDFLICIAKDLIKVRSDLKIILMSATLNADQFSEYYGGCP
MLHIPGFTFPVKEYYLEDVLELTGFTFEDEKQIPIWKRREQKVNREFEEMIEPYIRNLEQ
TQKYSSQTLNELYKKTSEELNLDLILELLHYIAQKPPGAVLVFLTGWDKISKLHTMIQED
RRLSGRKYLVIPLHSMMPTVNQREVFDRPPEGVRKIVLATNIAETSITIDDIVYVIDGGR
IKMKNYDKEANLSTLLPEWVTIANAKQRRGRAGRVQAGVCFHLFTRAREQILDEYPLPEI
QRTRLEEIILHIKILRLGSVKSFLSKVMMPPDQSVVDVSLQMLRAINAIDESENLTPLGF
HLARLPVDPLTGRMLLMAAIFSCVGPILTVAASLSFKDPFVTPIGKEKTVDEVKRKLSQG
TKSDHLLLVTVYDRWERACQYRDERNYCWDNFLSSAVLHQLKNMRRQFMGLLYEHKFVNT
RDPRAGEVNRNAENIALVRAIITAGLYPNVARVLPNRGRPSPHRPAKIRTAQERRVALHP
KSVNEKERDFEHPWLIYREKIKSTKVFIHDSSMVPNYPLLFFGEKLNYNSSNGVINVDGF
VRVRSSQHVAHLIQSLRNILDQLLEHKISHPGMTRWEKSTKEGALLHTIVDLISSERSTS
HDYQEYYDDQDDEDN
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgctcccaagacacaggtgggcttctcaggggcttgggtgggtttgtcctaccctgaca
tctttgtacagctaccttacttggatacgcttgcagggtggtggcagcatgtatggaagg
cggggtagtggaaactaccaagatggtggaagcagaggtggaggaggatggcgaggtgat
aaatatagaagaggaggaagaggtggtggtgatggtggtggaagaggaagaggaggtgga
aagggtggaaggggaggcagtagaggaggtcctccacctggacttcggggcaaggaaatt
ggtctgtggtacgctcgacagtctcgggaacggcaagagaaagatgagcgctacttacca
tctatctctatgaatgctagccaagtcagagatgtaggtcgtatgttggactcctttgat
ggtggaaataattctaccaaaaatgtctcaagcttggaaggtgcatgttcgaccgcactt
ccctcggatgatctgggacaggaatgggatcatcgtatatcatttattatgaaacaagaa
tttgatgaagatgacacaggtggtgagaacagtggtgaagggtttgaaggcgagatcgac
cacttctccaacccagatgcatggatacacgacacaacacaaaaacgtaaaggtatatca
gagggtgatcaagagaagaggcctcggggggaaaccttggctcgaagactggacaatatt
ggtgaatcagactttaaacaagcctatatggcaaatgttcatggaaatcagttgcgggac
tctggtggtctaggggcactaaaaggagatcaattggggctgatacgaagagaagacatt
gataagagactttttgaggatatggtagagcaacaaaatagtaaagtgtatcagcagatg
ttggaggtgcgtaaaagattgccatcatacaagatgagagatgaaattcttgataaaatt
ggatcaaatcaagttgtagtgcttagcggtgaaacagggtgtggtaaaactactcaagtt
gctcagtttattttggaagaagccattactgatggccaaggatctacgtgccgcattgtc
tgtacacagcctagacgtatttctgctatttctgtttcacaacgtgtagctgatgagcgt
ggagaaaagctagggaagagtgttggttaccagattcgtttggaagctgtgctgccacgt
accgagggatctatcttgttctgcacaacgggtattgtgttgcagtggttgcagagcgac
ccaaccttagcaaaggtgtcacatcttgtccttgatgaaatacatgagagagacatgttg
tctgattttcttatctgtattgccaaagaccttatcaaagtgcgctcagatctgaagatt
atactgatgagtgctacgctcaatgctgaccagttctcagagtactatggaggttgcccg
atgttgcatattccaggctttaccttccctgtcaaagaatactaccttgaggatgtcctt
gaacttactggatttacatttgaagacgaaaagcaaatacccatttggaaacgacgagaa
cagaaagtaaacagagaatttgaagagatgattgaaccttatatcagaaacctcgagcaa
actcagaaatactctagccaaactctaaatgaattatataagaagaccagtgaagaacta
aacttggacttgatactggagttgttgcattacattgctcagaagcctccaggtgctgtc
ctggtctttctaactggatgggacaagatttctaagttgcatacaatgatacaagaggac
agaaggctaagtggacgtaaatatctagtgatcccgctacactccatgatgccaactgtt
aaccagcgtgaggtgtttgatagaccaccagaaggtgtgcgtaaaatagtcttggcaaca
aatattgcagaaaccagtattactatagatgacatagtttatgttattgatggtgggcgt
attaaaatgaaaaattatgataaggaggctaatttgtcaaccctgctacctgaatgggtc
acaattgccaatgctaaacaacgccgaggtcgtgcaggtcgagtgcaggcaggtgtgtgc
ttccatctttttacgcgagctcgagaacaaatattagacgagtatcctctaccggaaatt
cagcgcactcgccttgaagagattattcttcatatcaagatcctgcgcttaggttctgtc
aaatccttcttatctaaagtgatgatgccacctgatcagtctgtggtggatgtgtcactt
cagatgcttcgagcaattaatgcaatagatgaaagtgaaaacctaacacctctgggtttc
catttggctcgtttgccagtagacccgttgacaggtcgtatgctgcttatggccgccatt
ttttcctgtgttggacccatcttgacagtggcagcatctttatcttttaaggatccattt
gtcactccaattggcaaagaaaaaacagttgatgaagtgaagagaaaattgagccaaggg
accaagagtgaccatttgttactagtgactgtttatgacaggtgggaacgtgcatgtcag
tatcgtgatgaaagaaactattgctgggacaactttctttcctcagctgtattacatcaa
ctcaaaaacatgcggagacagttcatgggattgctgtatgaacacaagtttgttaataca
cgagatccccgggcaggtgaagttaaccgcaacgctgaaaacattgcactagtgcgggcc
atcatcacagcgggcctctacccaaatgttgcccgagtcttgccaaacagaggacgacct
agtccacatagaccagcaaagatccgaacagcacaagaacgtcgagttgcattgcaccca
aagtcagtgaatgaaaaggaaagggattttgaacatccatggttgatatacagagaaaag
ataaagtcgacaaaagttttcatccatgacagctctatggttccaaactatccccttctc
ttctttggagagaaactaaactacaattctagtaatggagtaataaacgttgatggattt
gtacgagttcgaagttcacaacacgtagcccacttaattcagagtttacgaaatatattg
gaccaacttctggagcacaaaattagccatccagggatgacaaggtgggagaaatcaact
aaagaaggtgctcttctgcacacgattgtggacctcatctccagtgagagaagtacctcc
catgattaccaggaatattatgatgaccaagatgatgaagataattaa
DBGET
integrated database retrieval system
