Procambarus clarkii (red swamp crayfish): 123764015
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Entry
123764015 CDS
T07930
Symbol
htt
Name
(RefSeq) LOW QUALITY PROTEIN: huntingtin
KO
K04533
huntingtin
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123764015 (htt)
04131 Membrane trafficking [BR:
pcla04131
]
123764015 (htt)
03029 Mitochondrial biogenesis [BR:
pcla03029
]
123764015 (htt)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123764015 (htt)
Membrane trafficking [BR:
pcla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
123764015 (htt)
Mitochondrial biogenesis [BR:
pcla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
123764015 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
GNC1_N
HEAT_2
HEAT_EF3_N
LTP_2
Motif
Other DBs
NCBI-GeneID:
123764015
NCBI-ProteinID:
XP_045607420
LinkDB
All DBs
Position
23:34826194..34980930
Genome browser
AA seq
2941 aa
AA seq
DB search
MAALEKLIRAFEAVKLSQGGNSTNGGNPSMTTAGAQASEQRPPEHSRTMAALASSLSQQS
QGLLSRKDQVLSSKEKAATCSVIADALVGAKPTEMQRLLSVGIETLLLLTADSDPDVRMN
ANESLNRVIRSLSETQLGKIQVELYKEIKKNGSVRSLRAALSRFAALCHHIRPQKGRAYV
QNLLPYVTRMARRPEEPLLETLAAALEKIMPTLGHFTNDNEIKNLLKAFLPNLGHTSSAV
RRSAVSSLTVLCCHSREPPMFLGWLLSTILQILVPVQTDTSTSQILGCLLCLRSLVPHIG
KLCAPVIPSDVQHSQHTTHLHPAEYTVSYDQMLQVYELCLHFSAHSDHNIVTASLETLQT
LLQNPPVALLLTLTTPEGITRSRIMADPRTSLLSSRVSSQISVAPSLFEEDSLLLDLEGG
SGKVSMDMDTPDEKLDFEESTKEEDDQGGGLGEVQQTDIAEDEPDKNVSDLYSSIEIGKL
TDTSVLFGRGEINLNGEKRCVERDKRKHIYHISSHAHNKSLEDRPLSIDKASGSIGSFFD
ENLPVRYLVRYLTSSFLLSGHVGSLVPDRTVRVSVKVLALNCVGLAVMVMPSLMAEPMFV
DAAGELELQQHIDDTLRFHSHSDPQLGASVGIVIGQFIRASLVHGCGQYNDFGRPGLPLS
SLLEVLCKLLGNESSVTARGAVGGLGLCLGELLHSFHAAVILTVLPHLVNTASNPYWLVK
VELCDLLSGLPLSYTDHVESSSSYSTTGSSVPLRPADRFSHRVLTAVLIPLLADQDPRVR
SAAASACVKLVPEIMSTGDLIHKVASSLVHSGCLKGDKEDFGNYSQSPQHWSCRGLPSLP
VTPLHRLFTEMHVNPAECHGSAQGPVTSQVSQSLSRLICAFTTHLMSTNSKFLMLGCVEA
LSQLSEKYPPALYPAAWGCHITHVQASENNTHIGLITHVLSLAGESPVAGDLNVQQNILT
IASNILAGIAVEVIRLGREDIGGVKTPWSFLGSQQVTGVAECVVQHILRILCVYTHVLED
ILPGSRPTLAPLAPQTTLSPIKRRSRSDSAGDKNRTHSPSNGEKNDGEEKERKPLKPGTI
GAFSHLPEYIKMYDVLKNAHTNYKMSLEENTTEKLCGLLRVALISLGRLLEVASMVEFGK
LADEMLQYLKVVTSLLPTLTVQCGQQLLKCLFGSNVMALFDQLYRKVSDPLPHVSVDPAG
ATSKRTTEEPNNTGLHHLCFSIPLTELENDLTAMSAARKDSDPISLSLSQQKGNSNIFKT
LGRGNDKLSLSSYIRLFEPLVIKALKLYTVSSDVVMQRSVLQLLIHLVQIRVNYCLLDSD
QIFIGYVIKQFEYIEEGQIKQAEELIPSMFRFLVLLSYERHHSKSIIGVPKIIQLCDGLM
ASGQPPLSHCILALQPLVEDLFLVRSTTNTADQRELETQREVLCSMLLRLAHYHQVLRLI
SLVLSATMEANRERWRKLSRQVIDTLLPLLSKLQVNLDSQDSLAAIEEVMNGVCASVYRP
VDCVLKALFTSPCELETTMGVERWVGSVLLLLRTLITHSSLELVLARLEELGLSMDYVHN
DTPTDSVHSEVSLAPDALRRQITDSSTTFRDPLNVTQPETLPQVAMARFLLEVVRVSVSE
IRSVRLSLLNSGQPLEGGSGHHSPDMLVHLSHHLLLTLLHLTLSGQWREVITSLKDICSS
EVELAEEISEALLFVSGWYPSLTLLWCKLLTCLDLTSQNLWTRVLRTCQRKSVTSVSSSI
VSEASGPSSCLSLEFLRRCGLLVFSEFVVRHMQEGEWLTWLVVQHISDVVILHTEPPIHT
LIQSIHGSPAASALLIQAIHARCEYVQKAEYGGHIISLVSGVHISQSGALITFIVERLLA
LPYLVVTRAACALATQRLHLLLAVPPGQVLIQLPLEDLTKISSYMKENNLDKRYGQLYGL
LQRLLSQVHGVHVPPSSEPPLPSQSHHTPTTTTRLDLNWYLQLVRNRCMRGEAGGLECGQ
LLSQLEYSEIINIMSGKTFNTAMLTHTLRLGLTTTLQANRDWGDCNSSVETGDSEECSSG
SGTGEAPLYTASKVILLQHLAQVAGSLPRPHHTFTPGGGNKYSERVCKLLSGDDGIGSVV
DTLAPAVVEYLSSMTRLPWGAQVLPDNSEHILRFALLAMEYLHWQVWLGSVSVEVASLCL
NCVDSVLRCGTLASLLGLPDRISYVCSMVAALHTAASYLIKPRALPSLPASLSQCLNGVE
SSLLVACRRLMQLVSWLEAGNLRDLPACIAHPIRGIIMGLGRMPVVNSIVRIPPDMWTLG
WSPQFSGEHGTNLPPIQVELLQETDVLKQFIFRMQLFGWIGRQQFEETWMALLSVLNSTP
SENTPTEELPFINLSLSLAVRGITALLIQTLLLPTPGNPHSGHLLSIPRDKPPHYLTSKS
GRKLQEIMSRLHEKLREVQHLIKGGPRQTPAYQLSQVSVEYLVTALNSHAEPPDSPDTIL
HTGCYEFELRERQLASCGLDVQSCLHFLHYLYSSWLRPQSGLCASVVAEVVKSVSCLCDL
FCSSAHHRWVLESLLPLHTLHPIEDHITQQYIILATCKALATLRLAKQEVSCSLSEGVIH
IVESGLKSGQVSVRTCAVQGLLYLLQGPPEESPPLIILAASYILKYNDGKSRECESHEVA
VWEVWVYLVEHYETLPDPTLPSTALHMALSTAATSSTTPRLLHQVLKGVERLVLVQQLSS
NTVEVIFKLVMDLVLNGSPSTSLAALPLFITALYANVRNTALLTHAVQDDMASDPETLLL
VMEKLSIFFDRIRVGYPHEAGVISGLLGPCLLDVLPPSQILNKVITEYISSHQPHPHLLA
STLFQVFEGAISESGEGLVQEWVLLSLSNFTQRTPVSLAVWCLTCFFIAASSNRWLRAAF
PSVQARLGKLDARDIQIFCLSASHFRQSLATENQRAKFEAVFQAVATPGSPFQELLDCIK
D
NT seq
8826 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctagagaaattgattcgtgcctttgaggcagtaaaactgtctcagggaggc
aatagtacaaatggagggaatccttcgatgacaactgccggggctcaggctagtgaacag
cgtccgccagaacactcgagaacaatggctgcattagcatcctcgctgtcacagcagagc
cagggattgctcagcagaaaagatcaagtactgagcagcaaggagaaagctgccacatgt
tcggtcatagctgatgccctagtgggggcaaaacccacagaaatgcagagactgttgtca
gttggcatagagaccctgctgcttcttacagctgattccgatccagatgtcaggatgaat
gccaacgagtcactgaatagagttatcagaagcctgtctgaaactcagttgggtaaaatc
caagttgaattgtacaaggaaataaagaagaacgggtcagtgcgtagcttgagagctgct
ctatctagatttgctgctctgtgtcaccacatcaggcctcaaaaaggtcgcgcctatgtt
caaaacctcttaccttatgtgacacggatggctcgcaggccagaagagccccttttagaa
acacttgctgctgcccttgaaaaaattatgccaacccttggtcatttcactaatgacaat
gaaattaaaaatcttcttaaggcatttcttcctaatcttggccatacctcctcggctgtc
cgtcgatcagcagtgtcatctcttacggttctctgctgtcattctcgggagccacccatg
ttcttgggctggctgctaagcaccattctgcaaattctagtaccagtccaaactgataca
tcaactagccaaattcttggctgccttctgtgcctacgctcattggtgcctcatataggg
aaactttgtgctcctgttattccctcagatgtacagcactcccagcataccactcacctg
caccctgcagagtatactgtgtcctatgatcagatgctccaggtttatgagttatgtctg
cattttagtgctcattcagaccacaacatagtcactgcaagtttagaaacacttcagaca
ttacttcagaatccacctgtggcccttctccttactctcactactcctgaaggcatcaca
aggtctaggatcatggctgatccccgaaccagtctgctgtcatctagggtgtccagtcag
atcagtgtggctccatcactgtttgaagaagacagcttgttgttggatctggaaggtggc
agtggaaaagttagtatggatatggatacacctgatgagaaattagactttgaggaaagc
acgaaggaagaagatgaccagggaggaggactcggtgaagtacaacaaactgacattgct
gaagatgaacctgacaagaatgtcagtgatttgtattccagcattgaaataggaaagctt
acagatacctcagtgctttttggtagaggagaaatcaacttaaatggagagaagcgttgt
gttgagcgtgataagaggaaacacatttaccacatatcatctcatgctcataataaatcc
cttgaagataggccactctccatagataaggcgagtggctcaattggctctttctttgat
gaaaaccttcctgtgcggtatcttgtacgatatctaacttcttcgttccttctatctggg
catgttgggtcattagttcctgatcgcacggtccgggtcagcgttaaggtgttggccctt
aactgtgttgggctggctgtgatggtgatgccctcgttgatggctgaacctatgtttgtt
gatgcagctggggaattggagctgcagcagcacattgatgataccttgaggtttcacagc
cattccgacccccaacttggtgcaagtgtgggcattgttattgggcagttcatacgggct
agtcttgttcatggttgtggacagtataatgattttggtagaccagggttacccttatct
tcacttcttgaagtgctttgcaagttactcgggaacgagtcgagcgtaacagcacgaggt
gctgtgggtggcctgggactgtgcctgggagagctgctccattcctttcatgcagcagtg
atactcacggttttgcctcatttagtaaatacagcctcaaacccctattggttggtcaaa
gttgagctgtgtgatcttctgtcaggattacctctgagttatacagatcatgtagaaagc
agtagtagttacagcactacaggcagctctgttcctctcaggcctgcagacaggttttct
catcgtgtgttgacagccgttctgattccactcctggcagatcaggaccccagagttcgt
tcagcggctgcttcagcttgtgtcaaattagtacctgaaataatgagcactggagacttg
attcataaagtggcttccagtcttgtgcatagtggctgcctcaaaggtgataaggaggac
tttggaaattattcacagtcaccacagcactggtcctgcaggggccttccctcgttgcca
gttacaccactccatcggctctttactgagatgcacgttaatccagctgaatgccatggt
tcagcccaaggtcctgtgacctcacaggtctctcagtctctctcccgccttatatgtgca
tttacaactcatctcatgagtaccaacagcaagttcttaatgcttgggtgtgttgaggct
ctgtcacaactaagtgagaagtatcctcctgccctctacccagcagcatggggctgtcac
atcactcatgtgcaagcaagtgagaataacacgcatattggactgatcacacacgtcctc
tccttggctggggaatctccagtcgcaggggacctcaacgtacagcagaatattctcacg
atagcttcaaatattcttgcaggtattgcagttgaagtaataagactagggagagaagat
attgggggagttaagacaccgtggtcatttttaggatcccaacaggtaactggtgtggca
gagtgtgtggtgcagcacatcctccgtatcctgtgtgtgtacacccacgtgctggaggac
atcctgccgggttcaagacctacacttgctcccctagctccacaaacaacactttccccc
attaaaagaagatcacgaagtgattctgctggtgacaagaaccggacacattcacccagt
aatggagagaaaaatgatggtgaggagaaagaaaggaagccactgaaacctggaactatt
ggagcattttcacacttgccagaatatattaaaatgtatgatgtgctaaaaaatgctcac
acaaattataagatgtcattggaagagaacacaacagagaagctttgtggattgcttcga
gtagccctgattagcctggggagactcttggaagtggcatcaatggtcgaatttgggaaa
cttgcagacgaaatgcttcagtatttgaaagttgttacatctctccttccaacacttaca
gtgcaatgtgggcaacagcttctgaagtgcttgtttggatcaaatgtgatggccctcttt
gaccagctgtaccgaaaggtgtctgaccccttacctcacgtgtctgtggatccagctggt
gccacaagcaagcggacaacagaggagcctaataatacaggacttcatcatctctgtttc
agtatccctttgacagaactggagaatgacttgactgcgatgtctgctgccaggaaggat
agtgaccccatcagtttgagtctgagtcagcaaaaagggaattctaatatctttaagacc
cttggacgtggcaacgataagttatcgttaagttcttatatacgactttttgagccattg
gttatcaaagccttaaagctatatacagtgtcaagtgatgttgttatgcagagatcagta
ctgcagctgctgattcaccttgtacagattcgtgttaactactgtcttttggactctgat
caaatatttattggttatgttatcaaacaatttgaatacattgaagaaggacaaatcaag
caagccgaggaactgatcccctcaatgtttcgatttctcgtgttgctatcatatgagcgg
caccacagtaagagcattattggagttcctaagatcattcagctttgtgatggtcttatg
gctagtggacagcctcctctatctcactgtatattggcactccaaccattagtggaggat
cttttcctagtgcggagcacaacgaatacggcagaccaacgagaacttgagactcaacga
gaagtcctttgctccatgcttttaagacttgcacactatcaccaggttcttcgccttatc
tccctggtgttaagtgccacaatggaagctaaccgggagcgttggagaaagctttcacgt
caagtgattgacacattgctaccactcttgtccaagctgcaagttaatctggattctcag
gattctcttgcagccatagaagaggtgatgaacggtgtatgtgccagtgtgtatcgacct
gtggactgtgtactgaaagctctttttacttctccttgtgaactagagactaccatgggt
gttgagagatgggtgggcagtgtcctgctgctacttcgcactcttataacccactcttcc
ctggagttagtgctggcacggctagaagagcttggactgagcatggactatgtacataat
gatacaccaacagacagtgttcactccgaagtttccttagcaccagatgccttacgcaga
cagataacagattcctcgactactttccgagatcctctcaatgtcactcaaccagaaaca
cttccacaggttgctatggctagatttttgcttgaagtagttcgtgtgagtgtgagcgag
atcagaagtgtgcggctatctctgctaaacagtggacaaccactagaaggtggcagtggg
catcattctcctgatatgctggttcacctctcacatcacttgttgctcaccctcctgcat
ctcacactctcaggccagtggagggaggtgataacttctctgaaggacatttgcagtagt
gaagttgaattagctgaagaaattagcgaagctctgctctttgtatcaggctggtaccct
tccctcacactgctctggtgtaaattactgacttgtcttgacctcacatcccaaaacctg
tggacacgtgtgctcaggacatgccagagaaagtcggtcaccagtgtcagcagttctatt
gtgagtgaagcgagtggaccatccagctgcttgtctttagaattcttaagaagatgtgga
cttcttgtgttctcagaatttgtggtacggcacatgcaggaaggggagtggttaacctgg
ctcgttgtgcagcacattagtgatgtggttatcctccatacggagccaccaattcatacg
ctcatccagtccatccacggatcaccagcagcctctgcactcctcattcaagccatccat
gctcggtgtgaatatgtccaaaaggcagagtatggtgggcacataatttcactggtatca
ggagttcacatttcacagtctggtgctctgataaccttcatagttgaacgattactagca
ttgccgtacttggtagtgactcgggctgcgtgtgcattggcgactcagcgtctgcacctc
ctgctggctgtgcctccaggacaggttctcattcagctcccattagaagatcttaccaaa
atttctagttacatgaaggaaaataaccttgataagcgatatggacagttgtatggccta
ctgcagcggcttctgagccaggttcacggtgtccatgttccccccagcagtgagccccca
ctgcccagtcagtctcatcatacaccaactacaactactcgcttggatctcaactggtac
ctccaacttgttaggaacagatgtatgcggggagaagcaggagggctagagtgtggtcag
ctattgagtcagctggagtatagtgaaattatcaacattatgtctgggaaaacatttaac
actgcaatgctgacccatacactcaggcttggacttaccactaccctgcaggccaacaga
gactggggtgactgcaacagctcagtggagacgggtgacagtgaagagtgcagcagtggg
agtggtacgggggaggcaccattatacactgccagcaaggtgatattacttcagcatcta
gcccaagtcgcaggatccttgccacgtccacatcacacatttaccccaggtggcggaaac
aagtacagtgaacgagtctgcaagttgctgtctggcgacgacggcatcggcagtgtggtg
gacacgctggctccagctgtggtggagtatctttcttccatgacacgtcttccctgggga
gcccaagtcttaccagacaactcggaacatattctgagatttgctcttttggcaatggag
taccttcactggcaagtttggctaggcagtgtgagtgttgaagtcgccagtctgtgccta
aattgtgtggattctgttttgcgttgtggtactttagccagcctgttgggtctgcctgac
agaatatcctatgtctgctctatggtagctgctcttcacactgctgcatcttacctcatt
aagcctagggcactcccaagtcttcctgccagcttaagccagtgtttaaatggggtggag
agcagccttctagtggcatgccggagactgatgcagctggtgtcttggctggaggcggga
aacctacgtgatcttccagcgtgtattgctcacccaattagaggcattataatgggtttg
ggacgtatgcctgtggtaaacagcatcgtacgaatacctcctgacatgtggacgctggga
tggtcccctcagttctctggggagcatggtacaaatctaccaccaatccaggtggaatta
ttgcaagaaacagatgttctcaaacaatttatatttagaatgcagctttttggttggata
ggccgacaacaatttgaagaaacctggatggcactcttatcagttctaaactcaacccct
agtgagaatactccaacagaggagctacctttcattaatctgagcttgtcactggctgtg
cgaggaatcacagcacttttgatccagacccttctgctccccacaccgggcaaccctcac
agtggtcatttactaagtatcccgagagacaaacctccacattatcttacttctaagtct
ggtcgcaaacttcaagagataatgtcacgtcttcatgaaaagctacgcgaggtgcaacat
ttaatcaaaggaggacctcggcagacaccagcatatcaactgagtcaggtgtcggttgag
tatctggtcacagctctcaacagccatgcagaaccaccagactctcctgatactatcttg
catactggctgttatgaatttgaattacgagagagacaactagcaagctgtggtcttgat
gtgcagtcttgtcttcacttccttcactacttgtattcatcatggttacgaccccagagt
gggttatgtgcatctgttgtggcagaggttgtgaagtcagtgagttgtttgtgtgactta
ttctgctcaagtgctcaccaccgctgggttctcgagtcacttctgccacttcataccctc
caccctatcgaagaccacatcactcagcagtatatcattctggccacctgtaaagctctt
gcaacacttagattggccaaacaggaagtgagctgttcactaagtgaaggtgtaatacac
atagtagaaagtggactcaagagtgggcaggtttctgtacgtacctgtgccgtccagggc
cttttataccttctccaaggcccaccagaagagagcccacccctcatcattctggcagct
agctacattctcaagtacaatgatgggaagagtcgagaatgtgagagtcatgaggtagcc
gtgtgggaggtttgggtgtatttggtagaacactacgaaactttaccagaccccacgctg
ccatccactgcacttcatatggctctctcgactgcagccacttcctccacaaccccacga
ttactccaccaagtcttgaaaggtgtagaaaggctggtgttagttcagcagctctccagc
aacacagtagaagtgatcttcaagctagtaatggatttggttcttaatggttcaccttcc
acctctctggcagccttgccattattcattactgctctttatgcaaatgtaagaaacact
gcacttcttacacatgcagttcaagatgacatggcgtcggacccagaaactcttttactt
gtcatggagaaactctccatcttttttgaccggattcgagttgggtatccccatgaagca
ggtgttatatctggtctgcttgggccatgccttttagatgttcttcctcctagtcaaata
ctaaataaagttatcacagaatatatatccagccatcaaccacatcctcatttattagca
tcaactctcttccaggtatttgagggtgcaatcagtgagagtggggagggcctagtacaa
gaatgggtacttctctcattaagtaacttcacgcagcgtaccccggtgtcccttgcagtt
tggtgcctcacttgcttctttattgcagcctcgagtaataggtggctaagagcagctttt
ccttctgttcaagcacgtttaggaaaattggatgctcgtgacatccagatattttgtctg
tctgcttctcattttcgacagagtttggcaacagaaaaccagagagcaaaatttgaggca
gtattccaggctgtggctactccaggatcaccttttcaagaattattagattgcatcaag
gattaa
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integrated database retrieval system
