Procambarus clarkii (red swamp crayfish): 123764144
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Entry
123764144 CDS
T07930
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcla01002
]
123764144
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123764144
Enzymes [BR:
pcla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123764144
Peptidases and inhibitors [BR:
pcla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123764144
Ubiquitin system [BR:
pcla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123764144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
DUF3517
UCH_UBL1
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
123764144
NCBI-ProteinID:
XP_069185948
LinkDB
All DBs
Position
23:7660350..7828268
Genome browser
AA seq
2606 aa
AA seq
DB search
MDQEDENISLLLNMGFPDVQAIKRALKLSNGDVNEAVIFLTEQPLSSYTTVDDLRDVEMA
DPAHRPPSYDQQVDGENGNSMEFPATNLYELESRVFTDTWSIPYKREESLGKCLVAAARL
AEEGLCDVDESCHRFMDRCLPECFHKLLANGAVRRWGLEIQEGVFNMLDLLTSLVIVRLK
HGPVPEALLKDVYALAMDSKCEWNQKNKHRPAEFTGDVIYAESTSQFESYGWLMDLINIF
GNRGGLELVAGHFSSEEQLDAGQMAALLFPLGQCAKFLVKDTVCPIMLPAVSQALQYVAN
LEEKQLKGQKIGSCYDLLEAVRLLCVSLWPEKVQRTSDLRLEMIIRMLKTPHFSARMNAL
KELARLIEDSERCHGNILDADIIQEWMTSKRVLSLALEGNIDQVQYTDRMKELVEFMGPK
LQEEELTRIWHMAEKASPHVVDNIHRIMAAAATRFNPHQFDHLLSLVRKSWDGGNDRLRE
KLLTFIGKIGQDSHLGRTAEKMLDALWALARVPALPPKLVHQAMNEHLTILNESATRDQL
RKSYIVRCVEDIKRSPAVYLPLKQLHYLAQSITKGGASYFKTEKATLSELNRSHEIVKLI
TLSLGKCHALAVSTCGNQQPPPSTLIDGKYTHDHYLKVHLEFLQFLLKEGDIYLAWPRCK
DIWDTLVANPTASSYDKETCFSWFSGCLGDLESSTQRDLFCEKLLRLDPVTMTRPAFTCF
VDYFHAVNLNDHKLIRSGNVIIVDKLDPLGMEFIWQLVLECQEEQLAEDAMKLLLDMSYM
SLSVRLKRDPPQHHSKFISECYKKLEKSMLRVNETAVGAAVSTATKTLTAMAVSDLGGLP
STSRNNCLQHIRRVLLLAERYVSCIEEQHPGPRSLPPHGASFTGTPVILHVICDSSKMEI
NIECHSNEHIGAVRGKIANYARVPLDQVQTLSFGESCGGMLVNGGEQDNRLLHHLGITSN
MAVIAKINMASTAQLKEVGDNWDELPGTASYCDTVEEGSSNGAGASGTASGAVAGPSRLG
ARAFSAAVGDGHGSRYNLDLEKQLPGVVMASQGRDVFTMLYQLSQLDEPRIVEAVRRVLY
LVPTDPSIADKFDSICSAGITASDTSPRTTPYGSPAKRDKTRDKEKDRETGREVLRSLLD
LSAADMTPFRLLYNIEVLSGKIMPISAEGHINNNAHFCEEFLMCGGLSLITALLQKDSLP
QEVDYEIRQNVYLITLQILRYLLCGSTPKGQELPVIGQQPHPGPPKRSALDSSAQTSPPP
IAFSSFTPIIASRVILGFSVEEWSEMVSSLMRVSWAGAAGKLYLSSATLNMHDPVLSPPE
NCKSSRQSSTGSAHSSSSESEGVLQCGVCVQHGIVRPTDSLIASQALHLLVACLRFRPQL
IDRWYEMVNVKDFIVDVLVGCSGEGVREVAYQQFTSLINMSTPADVHPKQFLSQVLMKAP
LPLWVPSTSARGATLKLLSQCTQYFSLRSKLLSGLSAHDQEVLGINVHQMLEDEIGWLTN
FNATREAARERPESGIPTLRSADNVLLAGHLTLITALLSCEGINKEETGATLIPILVFEY
LFPASKLVMEGGSEQDSLSASRNYWAKCTGKESRLAAHQLLVHLVIHSELNMRTLTGHLV
SLHHTLNPDSLKEFEYAPAVDGRCASGYVGLKNGGATCYMNSVLQHLFLVPGVPEDILAV
CSDDENEESLFYQLQMVFGHLMESQLQYYVPDKFWKCFRMDGQPVNVREQQDAFEFYTRL
TEQIDDYLKSQQRESVFAQRFEGVYSIQRLCQNCPHRYEREEPFLALNLTVTKCHDLQDS
LDQFVKGELLEGDNAYYCEKCNQKRTAIIRTCVKSLPPVLVIQLKRFGYDWEASRALKFD
DYFKFPWILDMSPYTAEGLAEQEEDPGGGESRTVPSPDLTDSLLSSKVNTSTHTPGKSRT
LKASSHTPRINTRVHHKGGVYELVGVIVHSGQASAGHYYSYIKDCRGDPLTNPNKGRWFK
FNDTSVEQVEMNDTLLEQECFGGTYKAKVSYDSSNPLPEDRLRYWNGYMLVYDCTDERMA
TPKTPKTPKVGVMSRSFRASTSSARKSLPLGGGSSERRARTSLCELSQLLQQGERQGMFR
EHMPPRILSAITHENLTFFKNRDVFSLDYYSFVYQLCSANLENSQNSNNDALCVKAVYLG
LNFLLNTYLRTKDKEEFVINQWMHLLNTLVQQSREACSWAVNYFSSEDGGMHIAPLLLEC
PNKMIRGQFSNLLGSIFKAEYDHCNCVDSVQSIMKYLISLMVSDVPAAVKTSYQYFSLLY
CYCQQGSAQCRQILNLGGFSSLLSFLLGPSDLEKRRWSPVQAQDFGPLHSVIATLIIACD
MCPHQTTDSTSEQKSKIEPKKLVMPGEVVQVLYGGDQSRWLKEAVMAYKEITGNIPQLTL
TLKEAATMNSSFTSALLTAVMTEYAKPPSNMLKNLSQLLIEILNVSDSLQSSRTIAVLEG
FQSSDEENIMGLLDMIGTNKDYDSRRAYQCIKLVVTLSARCPLARDHLTRTQTRWQWAVE
WLRGKMDDHSATLSAVTGMSNEDSNTKNFQRTTSAQLTLEEATALLSELESTEMEIECDP
TELGDIKESVSEHDASPSHDLDAIDP
NT seq
7821 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagaagacgaaaacatctccctgttgctgaacatggggttcccggacgtacaa
gccatcaagcgggccctcaagttgagcaacggggacgtgaacgaggcggtgatcttcctg
acggagcagccgctgtcctcttacacgactgttgacgacctccgcgacgtggagatggct
gaccccgcccacagacccccttcctatgaccagcaggttgatggagaaaatggcaacagt
atggagtttcctgcaacgaacttgtatgaactagagagtagagtgtttacagatacttgg
tctataccttacaagagagaagagtcccttggaaagtgcttagttgctgcagcaagactg
gctgaagaaggtctgtgtgatgttgacgagtcttgccatcgtttcatggatcggtgcctt
ccagaatgttttcacaaactgttagcaaatggagcagttcgcagatggggtttagaaatc
caagagggtgtttttaatatgcttgacttgctcacaagccttgtaattgtaaggctaaag
catgggccagttccagaggccttactcaaggacgtatatgctcttgccatggattctaaa
tgtgaatggaatcaaaaaaacaaacaccgcccagctgaattcactggagatgtcatatat
gcagaatctacctcgcaatttgaatcatacggttggctaatggacctcattaacattttt
ggcaatcgtggaggcttagagctagtagctggtcacttttcctctgaagaacaacttgat
gcgggtcagatggctgcactactctttcctttagggcagtgtgccaagtttttggtaaag
gatacagtttgtccaatcatgttgccagcagtttctcaagctctccagtatgttgccaat
ctggaggaaaagcagctcaagggacaaaaaattggatcctgctatgacttgttagaagcg
gtacgacttttgtgcgtgtctctctggcctgaaaaagttcagcgtacaagtgatctgaga
ttggaaatgattattcgcatgttaaaaacgccacatttttctgcgcgtatgaatgcttta
aaggaacttgcaaggcttattgaagatagcgaaaggtgtcatggcaatattcttgatgca
gatatcattcaagaatggatgacaagtaaacgtgtgctatcccttgcattagaaggtaac
atcgaccaagtacagtatacagatcgcatgaaggagcttgtagagtttatggggccaaag
ttgcaagaggaggagctgacgcgtatctggcacatggcagaaaaggccagtcctcatgta
gttgacaatatccaccgtattatggcagctgctgcaacacgcttcaatcctcaccagttt
gatcaccttttgagcctcgtcagaaagagctgggatggtggaaatgatcgcttgcgtgaa
aaacttctcactttcattgggaagattggccaagattcacacttgggtcgaactgcagag
aagatgcttgatgccctgtgggctctagcccgtgttccagctttaccaccaaaactagtg
catcaagcaatgaatgaacacctgaccattcttaatgaatctgctacaagagaccagctt
cgtaaatcttatatagtgcgctgtgttgaagatattaaaagaagcccagctgtttacctg
ccacttaagcagcttcattatttggcacagtcaatcacaaagggaggagcatcttacttt
aaaactgaaaaggcaaccctatctgaacttaaccgcagccatgagattgtcaaacttata
accttgagtcttggtaaatgtcatgctctggcagtgtctacatgtggtaaccaacagcca
ccaccgagtactctaatcgatggcaaatatacacatgatcattatttaaaggttcatctc
gagtttctacagtttttgctaaaagaaggtgacatttatctagcctggccacgttgcaaa
gacatttgggacacactagtggctaaccctacagcatccagttatgataaggagacttgt
ttcagttggtttagtggatgtcttggtgacctggaaagcagtactcagcgtgacctcttt
tgtgagaagcttcttcgtcttgatcctgtcaccatgactcgccccgcattcacctgcttt
gttgattactttcatgcagtgaatctgaatgatcacaagcttatacggagtggaaatgta
attattgtagataaacttgatcccctcggaatggagttcatatggcagcttgtactggag
tgccaggaggagcaacttgcagaagatgccatgaaactcttgcttgacatgtcatacatg
tctctctctgttcgcctcaaacgcgaccctccgcagcatcattccaaatttatctcagag
tgttataaaaaactagagaagtccatgttacgtgtaaatgaaactgcagttggggctgcc
gtctctacagctacaaagacattgacagctatggcagtatcagatttaggaggacttcct
tctacatctagaaataactgcctccagcacatacgtcgagtcttattgttagccgagcgc
tatgttagttgcattgaggagcagcatccaggtccacggtccctccctcctcatggtgcc
tcgtttacaggcacaccggtgatacttcatgttatatgtgattcaagcaagatggaaatt
aacattgagtgccacagtaacgagcatattggtgcagtgcgaggaaaaattgccaattat
gcccgagttcccttagaccaggttcagacactctcatttggagaaagttgtggaggcatg
ctagtaaatggtggagagcaggacaatcgtcttctgcatcacttgggtatcacgtcaaac
atggcagtcatagcaaagattaatatggcaagcactgcccaactcaaagaggttggtgat
aattgggatgaattgccaggtactgccagttattgtgatacagttgaggaaggcagctcc
aatggtgccggagcttctggaacggcaagtggagcagttgctgggccctcaagattaggt
gccagagctttctcggcagctgttggtgatggccatggaagtagatacaatttggaccta
gaaaagcaactgccaggagttgttatggccagtcaaggccgtgatgtctttacaatgctt
tatcagctctcccaactagatgaacctaggattgtggaggctgttcgacgcgtactatat
cttgtgcctacggacccaagcattgctgacaagtttgactcgatatgcagtgctggaatt
actgcctctgatactagcccaaggactactccttatggctctcctgccaagagagataag
actcgagataaggagaaagacagagaaactggacgagaagttttacgttctttgcttgat
ttatcagcagctgatatgacaccatttagacttttgtataacattgaggtcctttcagga
aaaatcatgccaatttcagcagaaggccatataaacaataatgctcatttctgtgaagaa
ttccttatgtgtggaggactgagccttattacagcattgctacagaaagactccctgcct
caggaagttgactatgagattcgccagaatgtttatttaataacattgcaaatattaagg
tatttactttgtgggtcaacacctaaaggacaagaactacctgtaattgggcaacaacca
catccgggcccaccaaaacgttcagcccttgattcatcagctcaaactagtcctcctccc
attgcgttttcttcgtttacgcccattattgccagcagggtcatattgggattcagtgta
gaagaatggagcgagatggtgtcaagcttgatgagagtatcatgggctggtgctgcagga
aagctctacctctcatcagcaacactcaatatgcatgacccagttctttcaccacctgaa
aactgcaaatcctccaggcagagtagcacaggtagtgcccatagctcaagcagtgagagt
gaaggtgtgttgcagtgtggcgtttgtgtgcagcatgggatagtgcggcccactgattcc
cttatagcctcgcaagctcttcacctccttgtagcctgccttagattccgtcctcagcta
attgataggtggtatgaaatggtgaatgtaaaggactttattgtggacgttttagttgga
tgtagcggtgaaggagtaagagaagtggcttaccaacagttcaccagtcttatcaacatg
tccacaccagctgatgttcatcccaagcaattcctttctcaggtgctcatgaaagctcct
cttcctctatgggtaccctccactagtgctcgtggtgcaacgctcaaacttctatcacag
tgtacccagtacttcagtctcaggtctaagctattatctgggctcagtgctcatgatcaa
gaagtgcttggaatcaatgttcatcagatgctagaagatgaaatagggtggctcacaaat
tttaacgccactagagaagctgctcgggaaagaccggagtctggcataccgactttgcgc
agtgctgataatgttttgctggcaggccatctgactcttattactgctttgttgtcatgt
gaaggaattaacaaggaagaaaccggtgctaccctcattcctatccttgtttttgagtat
ctgttccccgcatccaagctggttatggagggaggatcagagcaggactcactaagtgcc
agtagaaattattgggccaagtgcactggcaaggagtcccgactagcagctcatcaactc
cttgttcatttagtgattcattctgaactgaacatgagaacacttactggacatcttgtg
tccttgcaccatacactcaatccagactcactaaaggagtttgagtatgcaccagctgta
gatggcagatgtgctagtggctatgtaggtctaaagaatggaggtgcaacatgctatatg
aactcagtccttcagcatctcttcttggttccaggagtacctgaggacattcttgctgtc
tgtagtgatgatgaaaatgaagaaagtttgttctatcagctgcagatggtgtttggccac
ctcatggagtctcagctacagtattatgtgccagataaattttggaaatgctttaggatg
gatggacaaccagtcaacgtcagggaacagcaagatgcatttgaattttatacaagattg
acagagcagatagatgattatttgaagagtcagcaaagagaaagcgtgtttgctcagcga
ttcgaaggagtctactccattcagagattatgtcagaactgtcctcacagatatgaaaga
gaagaaccgtttttagccctgaaccttactgtcacaaagtgccatgatcttcaggactct
ttggaccagtttgttaagggagaactccttgaaggtgacaatgcttattactgtgagaaa
tgcaatcaaaagagaactgccattattcgaacatgtgtgaagtctctaccacctgtcttg
gttattcagttgaagagatttggttatgactgggaagcttcccgagctctgaagtttgat
gattattttaagtttccttggattttggatatgagtccgtacactgcagaaggcttagct
gaacaagaggaagatccaggtggtggtgagagtagaactgttccatctccagatcttacg
gattctctgctatcttcaaaagttaatacatctacacacacaccaggaaagtctagaaca
ttaaaggcatcttcacatacacctcggataaatacaagagtgcatcacaaaggaggagtc
tatgaacttgtaggtgtaattgtacatagtggacaggccagtgcaggacactactactca
tatattaaagactgcagaggagacccattgacaaatcccaacaaaggtcgatggttcaag
tttaacgacaccagtgttgagcaagttgaaatgaatgatacactcctggaacaagaatgc
ttcggtggtacatacaaagcaaaagtctcttatgattcttcaaatccacttccagaagat
cgactaaggtattggaatggttacatgctcgtttatgattgcacggatgaaagaatggca
acccctaagacaccaaaaactccaaaggtgggggttatgtcccgatctttcagggcctcg
accagcagtgcaagaaagagtttgccacttggaggcgggagtagtgagagaagagctcgc
actagtctgtgcgagttaagccaacttcttcaacagggggagagacaaggaatgttccgt
gagcacatgcctccacgtattctgtcagccatcacacatgaaaacctcactttttttaag
aaccgtgatgttttctctctggattattactcatttgtgtatcaactctgctctgctaat
ttggaaaatagccagaacagtaacaatgatgctctgtgtgtaaaagctgtatatttggga
ctgaactttttactgaacacatacctgcgaacaaaagataaggaagaatttgtgatcaat
caatggatgcacttgctcaacactctagtacagcagtctcgagaagcttgcagctgggct
gtcaattacttttcaagtgaagacggaggaatgcacattgcgccacttttgctcgagtgc
cctaacaaaatgatccgaggacagttcagcaacctattaggttctatcttcaaggcagag
tatgatcattgtaattgtgttgatagtgtgcagagtataatgaaatacctcatctctctg
atggtttctgatgtgcctgcagctgtcaaaacttcctaccaatatttttcattattgtac
tgctattgccagcagggaagtgctcagtgcaggcagattcttaacttgggtggtttctca
agtctcctcagttttctcttgggaccgtctgacttggagaagcgacggtggtctccagtg
caggctcaagacttcggtcctctacattctgtaatagcaacgttgattatagcttgtgat
atgtgtcctcatcaaactacagattcaacaagtgaacagaaaagcaaaattgaacccaag
aagttagtgatgcctggagaagtggttcaggtcttgtacggtggagatcagtctcgctgg
ttgaaggaggctgtcatggcttacaaagaaataacaggcaacatacctcagctgacattg
acattaaaagaagctgcaacaatgaattcttcattcaccagtgctcttttgacagcagtg
atgactgaatatgcaaagcctccttcaaatatgttgaaaaatttatctcagctcctcata
gaaatattgaatgtgagtgactccctacagtctagtcgcaccattgctgtcctggaagga
tttcagagctcagatgaagaaaacattatgggccttttagacatgattggaaccaacaaa
gattatgacagtagacgagcttaccagtgcatcaagttggtggtaacgctctctgcccgt
tgcccactagcccgggatcatcttactcgtacccagactcgctggcagtgggctgtcgag
tggctacgaggaaaaatggatgaccattcagcaactctttcagcagttactgggatgagc
aatgaagattccaacactaaaaatttccaacgtacaactagtgcacagttaacattggag
gaggctacagctctgctcagcgagttagaatcaacggagatggaaattgaatgtgatcct
actgaactaggagatattaaagaaagtgtttctgaacatgatgcatcaccatcccatgat
ttagatgcaattgatccctaa
DBGET
integrated database retrieval system
