Procambarus clarkii (red swamp crayfish): 123764548
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Entry
123764548 CDS
T07930
Name
(RefSeq) uncharacterized protein
KO
K08535
liver X receptor beta
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123764548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123764548
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pcla03310
]
123764548
Transcription factors [BR:
pcla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123764548
Nuclear receptors [BR:
pcla03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
123764548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Motif
Other DBs
NCBI-GeneID:
123764548
NCBI-ProteinID:
XP_045608524
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Position
1:34226547..34303479
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AA seq
754 aa
AA seq
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MSKDGYYHFGESGSKAVEGLNLPSLPTTSYWYNAHSTVGSSLYPDHETSGTPPYKGLQQI
DVKLAENNRDHLEWWTDDMCLETQPRAFDSQYWEGHPTERGYVQSSDHSVAGSDFEPSDQ
PLVLLSCRTRDHQDDYNSPELLNSVDIVKHDVDESSFCSESVSSQEYSPTSNNNNTPSNK
KYTPETITPIDEHQRNQKRYKKEPKEKAKEDKRCGVCGDAARSMHFGGMACDSCKAFFRR
SVQSGAYKSFQCPENKICPISKQNRKVCQYCRFKKSQENGMEINWVMSETDRMVLWKNRL
AKQRHVQEEKIKDKVYGDLPRSLDPKEADVLRNLAALQESTFRSIPYPEDCYGDNIEALA
NLFVFICKKLGLFFQSVEDYQEVCKTDQNLLMKNGIGTSIYLHGAYMYDYENEMWPAECN
KEALKIPPISMATLQKFTVLPEAFDAIMKYYNKYAKELKDEIILALICLISFFQPDDPQF
LNSQQIQDIQLKYLELLRRYLIAKDGDVVAKITFPKLLVGLADIKEILEFHSKVDIKPTI
NHQHISPQSTVENQMSAVNELLQKASQGQLPEFSSILTASDKRQPLWQQSNAVRKKRSNS
NLIIRGDQFYHPQTSQIFGVTPRTDMIITNPMERIDNFTRKQNLPRAQINEVLDYEDDYR
GEGDRQTSVLGRESVKAKNTSAVYHPGRQLQAASVGNNGECDQSGPIDKKRAVEVLCDTL
QHISCADDEQFIQSLKQNLSPHLLVNLAEKLSPS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagacgggtactatcatttcggggagtcgggcagcaaagctgtggagggcttg
aaccttccctccttgccaactacatcgtattggtacaatgcgcactctacagtgggaagc
tccctctacccagatcacgagacttcaggaactcctccatacaagggacttcagcaaata
gatgtcaaattagcagaaaacaatagagaccatttggagtggtggactgatgacatgtgc
ttggaaactcaaccaagagcttttgattcccagtattgggaaggccatcctactgagcga
ggatatgtgcaatcaagcgatcattcagttgcagggtcagattttgagccatctgatcag
ccattagtgctactgagttgtcgtactcgggaccaccaagatgactacaacagtccagag
ttgttgaattctgtggatattgttaaacacgatgttgatgaaagctctttttgttcagaa
tctgtcagcagccaagaatattccccaaccagtaacaacaacaatacgccatccaataag
aaatatactccagaaaccataacacctatagatgaacaccaacggaaccaaaagagatac
aaaaaggaaccaaaagagaaagctaaggaagataaaaggtgcggagtgtgtggggacgca
gcgaggagcatgcattttggagggatggcttgcgattcatgtaaagccttttttcgacgt
tcagtgcagagtggtgcctacaaaagtttccagtgtcctgagaacaagatatgtccaatc
tcaaaacaaaacagaaaagtttgtcagtattgcagatttaagaaaagtcaagagaatggc
atggagattaactgggtgatgtcggaaactgaccgcatggtgctatggaagaacagactt
gctaaacaacgtcatgtccaagaagaaaagattaaagacaaagtatatggagacttgcca
agatcactagaccccaaagaggctgatgtgttaaggaatcttgctgctcttcaagagtct
acatttaggtccattccttatccagaggattgttatggtgataacatagaagcattagct
aatctttttgtttttatatgtaagaagctaggactgttcttccagagtgttgaagattat
caggaggtttgtaaaacagaccaaaatcttttaatgaagaatgggattggcacgtcaata
tatcttcacggtgcatatatgtacgattatgaaaatgaaatgtggcctgctgaatgcaat
aaagaagctttaaaaattcccccaatttccatggctactcttcaaaaatttacagtttta
ccagaagcttttgatgccattatgaaatactataataaatatgctaaagagctcaaagat
gaaattattttggcattgatctgcttgatttccttttttcagccagatgatcctcaattt
ctgaattcacaacagattcaggatattcagctcaagtacctagaacttcttcggcgatac
ttaatagctaaagatggtgatgttgttgcaaagataacttttcccaaacttcttgttgga
cttgcagatattaaagagattttagaatttcatagtaaagttgatatcaaaccaacaata
aaccaccagcatatttcaccacagtcaacagtagaaaatcagatgtcagcagtgaatgaa
ttgttacaaaaggcttctcaaggacagctgccagagttttcttcaattttaacagcttca
gataaaaggcaaccactatggcagcaaagtaatgcagttagaaaaaaaagatcaaattca
aacctcattatacgtggagatcagttctatcatccccaaactagccaaatatttggtgtg
actccaagaactgatatgatcatcacaaatccaatggagaggatagataattttacaaga
aaacaaaatttaccccgagcacaaataaacgaggtcttggattacgaagatgactataga
ggggaaggagacaggcaaacaagtgtgttaggtagagagtctgtaaaggctaagaacact
tctgctgtgtatcatcctggaagacagttgcaggcggcgtcagttggcaataatggagag
tgcgatcagtctggtccaatagacaagaagagggcagttgaagttctttgtgatacattg
caacatatctcttgtgctgatgatgaacaattcattcagtcactgaaacagaatttgtct
ccacaccttttggttaatctagctgaaaagttgtcaccatcttaa
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