Procambarus clarkii (red swamp crayfish): 123764551
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Entry
123764551 CDS
T07930
Symbol
Sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123764551 (Sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123764551 (Sf3b3)
03041 Spliceosome [BR:
pcla03041
]
123764551 (Sf3b3)
03036 Chromosome and associated proteins [BR:
pcla03036
]
123764551 (Sf3b3)
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123764551 (Sf3b3)
Spliceosome [BR:
pcla03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
123764551 (Sf3b3)
Complex B
123764551 (Sf3b3)
Complex C
U2 SnRNP specific factors
123764551 (Sf3b3)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
123764551 (Sf3b3)
TFTC complex
123764551 (Sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
123764551
NCBI-ProteinID:
XP_045608494
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All DBs
Position
5:1007908..1052592
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AA seq
1217 aa
AA seq
DB search
MHLYNLTLQRASGITHAVHGNFSGTRTQELVVSRGRSLELLRPDPNTGKVHTILTTDIFG
VIRSLMAFRLTGGNKDYVVVGSDSGRITILEYNQAKNQFERIHMETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLVYHTVGVDVGFENP
LFACLEIDYEEADTDPTGEAVHRTQQTLTFYELDLGLNHVVRKYHEPLEEHANFLISVPG
GNDGPSGVLVCSENYITYKNLGDQPDIRCPIPRRRNDLDDPERGMIFICAATHKTRSMFF
FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFYAPRQLQNLVLVDELDSLSPIMACQIADLANEDT
PQLYTVCGRGPRSSLRVLRHGLEVSEMAVSELPGNPTAVWTVRKRSEDQYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLACSQLGDDALVQVYPDGIRHIRADRRVNEWKAPG
KKTIVRCALNQRQVVIALTGGEIVYFEMDPTGQLNEYTERKEMKSDVICMGVGRVPVGEQ
RSRFLAVGLSDNTVRIISLDPNDCLTVRGMQALPALPESLSIIEMGGQEGADNEPRTLGA
LYLNIGLQNGVLLRTVLDSVTGDMSDTRTRYLGSRPVKLFRIIMQGNESVLAMSSRSWLS
YYYQNRFHLTPLSYESLEYAAGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSHALE
YTPRKFVIHPESGHLVLIETDHNAYTDDTKRQRKMQMAEELREAAGEEEAEVAERMAEAL
LSEDLPDAVFGAPKAGPGMWASVVRIIEPIQGNTLHMIRLDQNEAAFSIALVKFANQTDM
DQQYLLVGTVKDYQLSPRQVDCGYIYCYKVVMDCTSLELLHRTEVEDIPTAICSYNGRVL
IGVGRLLRIYDLGKKKLLRKCENKHIPNLIVDIKARGQRVFVSDVQESMFVLRYKRHENQ
LIIFVDDTNQRWVTTSCLLDFDTAAVADKFGNIAVVRLGSDINDDVDEDPTGNKALWDRG
LLNGASQKAEVIANFHVGETVNTLEKATLIPGGSESLVYTTLSGTVGVLVPFTSREDHEL
FQNLEMHMRSEHPPLCGRDHLSFRSYFFPVKNVIDGDLCEQFNMVDPGKQRSISEDLDKT
PNELSKRLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcatctctacaaccttaccttgcagcgtgcttcgggaatcactcatgccgtccatggc
aacttctccggcacacgcacccaggaactggtggtgtctcggggacgctcattggagctc
ctccgtcccgatcccaacactggcaaggttcataccattctgacgacggacatatttggg
gtgatccgctcgctgatggccttcagactgactggaggcaataaagactatgttgttgtt
ggctctgattctggacgaattaccatcttggagtacaatcaggccaagaaccagttcgag
agaatccacatggagaccttcggcaagagcgggtgtcgacgtatcgtccctggacagtac
ctggccattgaccctaagggaagagctgtcatgattggggccgtcgagaagcagaagctg
gtgtacatcctcaaccgagatgctgcagccagactcaccatctcgtcgcccctggaggcc
cacaagagcaacacgctcgtgtatcacaccgttggcgttgatgttggctttgaaaatcct
ctgtttgcgtgcttagagattgactatgaggaagctgacacagatccaacaggcgaggcg
gtgcacagaacgcagcaaacgcttacgttctatgagcttgatcttggactgaatcacgtt
gtgaggaagtaccatgagccactggaggaacacgcaaacttcctcatctccgttccaggt
ggtaatgatggtccatctggggtgttagtttgctcggaaaactacatcacgtacaagaac
ttgggcgaccagcctgatatccgttgtccaattcctcggagaaggaatgaccttgacgac
ccggaacgaggaatgatcttcatctgcgcagcgacccacaagacccgctccatgttcttt
ttcctggcccagaccgagcaaggagacattttcaagattaccttggaaactgacgaagac
gtcgtgacggagatcaagctcaaatattttgacaccgtgccgccagcaactgccatgtgt
gtcctcaagacgggtttcctctttgttgcatcagagtttggtaatcattatctataccag
attgctcatcttggtgacgacgacgacgagccagaattcagctcggccatgccacttgaa
gaaggggatacgttcttctacgctcccagacagttgcagaatcttgtactggtcgatgaa
cttgactccctctcccccatcatggcctgccagattgctgatttggccaatgaagatacg
ccccagctgtatacagtgtgtggaagaggcccacggtcatccttgcgggtgttgcgtcac
ggtctggaggtgagcgagatggccgtgtcggagctgcccggtaaccctactgctgtgtgg
accgtcaggaagcgaagtgaagatcagtatgattcgtacatcattgtgtccttcgttaat
gccacgctggtactgagtatcggagaaactgtagaggaagtgacggattctggcttcttg
ggcaccaccccgacattggcttgttcccagctcggtgatgatgcattggtacaggtttac
ccagatggcattcgtcacatccgtgctgatcggcgtgtcaatgagtggaaagctccgggc
aagaagactattgtacgatgtgccttgaaccaacgtcaggttgttattgcactgacggga
ggagaaattgtctactttgagatggacccgactggacaactaaacgaatatacagagagg
aaggagatgaagagtgatgttatctgtatgggtgtcggccgtgtgcctgtcggggagcag
cgctcgcggtttttggccgttggtctctcggataacacagtcaggatcatcagtctcgat
cctaatgactgtctgactgtacgaggaatgcaggcgctgccggctctgcccgagtctctg
agtataattgagatgggaggccaggaaggtgcagacaacgagcctcgcacactgggcgcg
ctctacctcaacatcggcttgcagaatggtgtgttgctgcgtacggttctggattctgtg
acgggcgacatgtcggacacccgcacacgttatttgggttcccggcctgtcaagctcttc
agaatcatcatgcaagggaatgaatcggtgctggccatgtcgtcgagatcgtggctgtcc
tactactaccagaacaggttccacctgacgccgttatcttacgagagcctggaatatgcg
gccgggttctcgtcagagcagtgtcctgagggtattgtggccatctccaccaacacactg
aggatcttggctctggagaagctcggagccgtcttcaaccaggtgtcccatgcactagag
tacacaccacgcaagtttgtcatccatcccgagagcggacacctggtgctgattgagacg
gaccacaatgcctacacggatgacaccaaacgtcagcgcaagatgcagatggcagaggaa
ctgcgagaggcagcaggggaggaggaagctgaggttgccgagaggatggcagaagcgtta
ctctccgaggacctcccagatgccgtgttcggagccccaaaggccggtcctggcatgtgg
gcctccgtggtgcgcatcattgagcccatccagggcaatacgttacacatgatcagattg
gaccaaaatgaggcagccttcagcattgcattggtgaaatttgccaaccagacggatatg
gaccagcagtacctcttggtgggcaccgtcaaggactaccagctgagtccccggcaggtg
gactgtggctacatatactgctacaaagtcgtcatggactgcaccagtctagaactcctt
catcgaacggaagttgaggacattcccacagccatatgctcgtataatggtagagttttg
attggggtcggccgcttattaagaatatatgacctaggcaaaaagaagctgcttcgaaag
tgtgaaaataagcacattccaaatctgatcgtggatatcaaagccagaggccagcgtgta
tttgtcagtgacgttcaagaaagcatgtttgttctgaggtacaaacgtcatgagaatcag
ctcattatatttgtggatgacacaaatcagcgctgggtgaccacgtcctgccttttggac
tttgacactgctgctgtcgccgacaagtttggcaacattgctgtggtacggctgggcagc
gacatcaacgacgacgttgatgaggaccccaccggcaacaaggcgctctgggaccgtggt
cttctgaacggagcttcgcagaaggcggaagtgatcgccaacttccacgtaggggagacc
gtcaatacgctagagaaagctacactgatccctggaggaagcgagtcgctggtgtacaca
acgttgagcgggacggtgggagtgttggtgcccttcacgtctcgggaagatcacgaacta
ttccagaacttggaaatgcacatgcgctcggagcacccaccgctctgtgggagagaccac
ctctccttcaggtcctatttcttccccgtcaagaatgttattgatggagacttgtgcgaa
cagtttaatatggtggatccaggcaaacaaagaagtatctcagaagatctggacaagact
cccaatgaattgtccaagagattagaagacataagaactcgttatgccttctaa
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