Procambarus clarkii (red swamp crayfish): 123764745
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Entry
123764745 CDS
T07930
Symbol
Polr2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03020
RNA polymerase
pcla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123764745 (Polr2B)
09124 Replication and repair
03420 Nucleotide excision repair
123764745 (Polr2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123764745 (Polr2B)
03400 DNA repair and recombination proteins [BR:
pcla03400
]
123764745 (Polr2B)
Enzymes [BR:
pcla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123764745 (Polr2B)
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123764745 (Polr2B)
DNA repair and recombination proteins [BR:
pcla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123764745 (Polr2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123764745
NCBI-ProteinID:
XP_045608784
LinkDB
All DBs
Position
48:8511578..8543755
Genome browser
AA seq
1181 aa
AA seq
DB search
MLAYADIDEDIAYGDEDGDEISPDIWQEACWLVISSYFDEKGLVRQQLDSFDEFITMTIQ
RIVEDSQAIDLQAEAQHTGGELETPPRHLLKFEQIYLSKPTNWEKDGYNYSMMPNEARLR
NLTYSSPLYVDIVKTVIREGEKPIEQKEEKIYIGKIPIMLRSTYCLLSGLTDRDLHEVNE
CPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKCEIRSCIEHSARPVSTLW
INMMARGGSSAKKSAIGQRIIGVLPYVKQEIPVMIVFRALGFVADRDILEHIIYDFDDPE
MMEMVKPSLDEAFVIQEQNVALNFIGGRGARPGVTKEKRIKYAREILQKEMLPHVGVSDF
CETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMALLFRGLFRNLMKEVR
MHAQKLLDKGQEYGLDAAVKPKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFA
STLSHLRRVNSPIGRDGKLAKPRQLHNSLWGMICPAETPEGAAVGLVKNLALMSYISVGS
QPAPILEFLEEWSMENLEEIAPSSIDDATKIFVNGCWVGIHRDPEQLMMTLRKLRRQMDI
IVSEVCMVRDIRDREIRIYTDAGRICRPLLVVENGKLLLKKRHIDLLKEREYNNFSWQDL
VASGVVEYIDCSEEETIMIAMSLEDLGVEEEKTYCNTYTHCEIHPAMVLGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLFYPQKPLVTTRSMEYLRFRELPAG
INSIVGIACYTGYNQEDSVIMNLSTVERGFFRSCFYRSYKDAETRRSGMQEEQMFEKPSR
DTCQGMRHAIYDKLDDDGIISPGMRVSGDDVIIGKTITLPENEDELEGQTRRFSKRDASV
FLRGSETGIVDQVMLTVNVDGDRFTKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRVEDM
PFTVEGITPDIIINPHAIPSRMTIGHLIEALQGKLGANKGEIGDATPFNDAVNVQKISNL
LQEYGYHLRGNEIMYCGHTGRKMNAQIFLTPTYYQRLKHMVDDKIHSRARGPVQILVRQP
MEGRAREGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYSVHVCNLCGLMAIANLRNNT
FECKGCRNKTQISQVRLPYACKLLFQELMSMNIAPRMMVMK
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgttggcctacgccgacattgacgaggatatagcctatggtgatgaagatggagatgaa
atctctccagacatctggcaggaagcctgttggcttgttatttcctcatactttgatgag
aaaggtcttgttcgacagcaacttgactcttttgatgagttcattaccatgactatccag
aggattgttgaagactctcaagctatagatctacaagctgaggctcagcatacaggcggt
gaactcgagactccacctcgtcacttgctgaaatttgaacagatttacctgagcaagccc
acaaactgggagaaagatggatacaactatagcatgatgcccaatgaagcacgattaagg
aacctcacctactcgtctccgctctatgttgacatagtaaagacagtcatcagggaaggg
gagaagcccatagagcaaaaagaagaaaagatttatattggtaagatccccattatgttg
cggtctacatactgcttgttgagtggcctgactgaccgtgaccttcacgaggttaacgaa
tgtcctcttgatcctggtggctattttattatcaacggctcagagaaagtgctgattgcc
caggagaagatggcgacaaacaccgtgtacgtgttcagcatgaaggatggcaaatatgct
tacaaatgcgaaatccgctcctgtattgagcactctgcacgaccagtatccactctttgg
atcaacatgatggctaggggtggaagtagtgctaaaaaatctgctattggtcagcgaatc
attggtgtcctgccgtatgtgaagcaggaaatcccagtgatgatagtgtttcgtgcttta
ggctttgtagcagatcgagatattcttgaacatatcatctatgattttgatgatccagag
atgatggaaatggtaaagccatctctggacgaagcctttgtgattcaggagcagaatgtt
gcattgaacttcattggtggacgcggtgctcgacctggtgtaacaaaagagaagcgcata
aaatatgcccgtgagattttgcagaaagaaatgttacctcacgttggtgtatcagatttt
tgtgagacaaagaaggcatactttctcgggtacatggttcacaggcttttgcttgcagct
ttaggtcgacgagagctagatgatcgtgatcactatggaaacaagaggctagatttggcc
ggtcctctcatggccctacttttccgagggttgttccggaatttgatgaaagaagttcgt
atgcatgctcagaaactcttggataaaggtcaagagtatgggttggatgctgcagttaag
cccaagctcattactgatgggctgcgatattctctggccacgggcaactggggagatcag
aagaaggctcatcaggccagagctggtgtctcacaggtgttgaaccgactgacttttgca
tcgacgttgtctcatcttcggcgtgtcaattctccaattggtcgagatggtaaattggca
aaacctcgacagctgcacaactctctgtggggaatgatatgtcctgcagaaacaccggag
ggagctgctgtcggcttggtgaagaatttggctctcatgtcttacatctctgtaggatcc
caaccagccccaatcctcgagttcttggaggagtggtctatggaaaacttggaggaaata
gcaccttcttcaattgatgatgcaaccaaaatttttgtgaatggttgttgggttggtatt
catcgtgacccagaacaactgatgatgacgctacgcaagttgagacgtcagatggatatc
attgtatctgaggtgtgtatggtaagagatatcagggacagggagattcgtatatataca
gatgctggtcgtatttgccgccctcttctggttgtagaaaatggtaaactgctactcaaa
aagagacacattgacttgcttaaggaaagagaatataacaacttcagctggcaggatctt
gtagcaagtggtgtggtggagtacattgactgctctgaagaagagacaattatgattgcc
atgtcccttgaggacttgggtgtggaagaagagaaaacttactgtaatacgtacactcac
tgcgagatccaccctgctatggtgctgggtgtgtgcgcctccatcatccccttccctgat
cacaaccagtcccctcgtaacacttaccagagtgctatgggtaagcaggcaatgggtgtg
tatatcaccaattttcatgtgcggatggacaccctggcacatgtgctgttctatcctcag
aagccacttgttactacacgttctatggaatacttgcgtttccgagaattgcctgcaggc
atcaactctattgtcggcattgcatgctatactggttataaccaagaggactctgtcatt
atgaacctctctacagtagagcgtggattcttccgatcctgcttttaccgttcgtacaaa
gatgcagagaccagacgctcaggcatgcaagaagagcagatgtttgagaaaccctcgaga
gatacctgtcaaggtatgcgacatgctatttatgacaagctggatgacgatggaattatc
tcgcctggtatgcgtgtgtctggtgatgatgtcatcattggcaaaaccatcactctgcca
gaaaatgaggatgaattagaaggtcaaacaagacggttcagcaagagagatgccagtgta
tttttgaggggctcagaaactggtattgtggaccaggtcatgttgactgtgaacgtagat
ggtgatcgttttaccaagattcgtgtaaggtctgtacgcattccccagattggtgataaa
tttgcctcccgtcatggacaaaagggtacctgtggtattcagtacagggtggaggatatg
ccttttacagtagaaggtataactcctgacatcattattaatcctcatgccattccctct
cgaatgacaattggccatttaattgaagctttacaaggaaagcttggtgccaacaagggt
gaaattggtgatgctacgcccttcaatgatgccgtgaatgtacagaaaatctccaatttg
ttacaagagtatggctaccacttaagaggcaatgagattatgtattgtggtcacactgga
cggaagatgaatgctcagattttcctgacgcctacatattatcagcgtttgaagcatatg
gtagacgataaaatccattcccgtgcaagagggcctgtgcagatcttagtaaggcagcct
atggaaggtcgtgcaagggaaggtggcttgcgattcggtgagatggaacgagattgccag
attgctcatggcgccgcacagtttctccgtgaacgtttgtttgaagtcagcgacccatat
tctgttcatgtgtgcaacttgtgtggtcttatggctattgctaatttacgcaacaatacc
tttgaatgtaagggatgccgcaataaaactcagatatcccaagtgcgtcttccctatgct
tgtaaattacttttccaagaattgatgtcaatgaacattgctcccaggatgatggtgatg
aagtga
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integrated database retrieval system
