Procambarus clarkii (red swamp crayfish): 123764747
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Entry
123764747 CDS
T07930
Symbol
CLIP-190
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
123764747 (CLIP-190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123764747 (CLIP-190)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcla04812
]
123764747 (CLIP-190)
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
123764747 (CLIP-190)
Cytoskeleton proteins [BR:
pcla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
123764747 (CLIP-190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
APG6_N
SlyX
Motif
Other DBs
NCBI-GeneID:
123764747
NCBI-ProteinID:
XP_045608785
LinkDB
All DBs
Position
48:8559408..8726403
Genome browser
AA seq
1761 aa
AA seq
DB search
MESPRASGLRVPVRVGRPGPTLCTQHSHELPSPQPSKASRVAPLSTPSPSAGANGERVDA
EVEKLRRLSQELARKEEFYLLNRTTSPKSWWPSPRHLSFSKDNTYIYNNNNDVLPSNNNL
LNHFNALKSVDHPVSLHYKRAKSPLRDNGTFPCEVHGRKAAPEQTFLANTLPDLPSYKMP
SQRRFSDEVNFRRPLATLHEDQVVARRRFSEDVRKKSLDTSGVLDDLHKQHRRLSEAGVR
RLSDASIVLTEDTDSFIIGDRVWVGGTKGGVISYIGDTQFAPGEWAGVTLDEPIGKNDGS
VAGIRYFQCEAKKGVFSRLTRLSRSHLTDQDIEILTSRSSSVGAESPKSNGTPATSVASG
PTTTTRKITPSSAPTSAKPSATAASVKSVSPAPASTPKKTSSSGPVSSSSDPKVGDRVVI
TSAVGSRHGTLRFIGKTDFADGIWAGVELEEPTGKNDGSVAGKKYFECKDKYGLFAPIAR
VGKCAGSAASPRRTSVVPQTPRPTIRRSNSRESLGGSSVASSTASSVRGTRVRLGVTSLT
PGQRPTRIATSSVPSTKALQEALAEKTQHVDQLMRERDVERAEVARMAAQADEATRAAHD
MRLQLDQLQEESEERLHDFGERIRNLEKEREDFIAKLEDKQRELDDLAFRLEEESITKAD
LESLALLESSQSTTDGEKMKGMEKELEEARRKLKERGTMEANKAFEMEELEINLRASVEE
LQARIMEMEGDKESLENVLSKQSEQLKVLETNAEALRNDINEREQKIKLLESSKEEDQAR
SKERSLEITEKDTRIRELQLELDKTSKEVNTASHQLEEMSNKFANEKSEKDSLLKEILGI
REQLNSGSSETSTLMGEISKLKEELREATRHHQQAAEKITLLECQKSKLEAELENANSVV
SSVDGKLTQAMSSLKLKEEQLQNLMERLQKTELCLKEEQETRVIEKQTAEKQHLQKEEEH
IQKIKIFEEKTKDLESRIAAKEAEINESNRQLTKVESKIAALEVERVQLKEQVAAYLSSS
SGSSEQLATLKNQLQEKDKQIENVQVSLQEKIAALSQEQAARAGDNDTARQQLQQVKEKY
EKELDEMKKNLLNLEKEIGAKVEEILNLKKQHIAEQEELVKKKDLELYELQEQVMLKDGE
LSELEDKIKCLESQVDAMTCASADKVGSMEKALGDVRVEKERLLREIEEVLKSKVELEQQ
LSALDKENRKLRTEQEENLLAVTQKDQKVAALKAEVEHLMTTFNAHREDVQKQLVDAQAD
KEAMAHIHKTFEKELVRLNCLQESLSASEEEKNTLQTHINQLQEELSRLKGIEEENMNLA
KEKDKLQVELQKIKVLETENLSLLNERNKLEDDHREMIEDLRKQKDELLEEKCKMEEEIR
SLRKCEEERSRLGGDVQRLEAELTKMMQIQESNTTLTSQLEKLKAEKAELVSSTKVKEEQ
LILKKQLEEDNIRLNSSIKSCTEEKNKLMIDIQRLEAETACRLKDIESEYNRVKDTVQVL
QEEKKMREEEKEILKEEIKKLRLVEEEKKDLESKNIVLTQGMEELKQSHEGRIGEFEVEK
FNLVEEVVSLQDQLSVLKTEMVETTRKMEEANAAAEAAGILRAKINLLETEKRRLESKIV
DLRVQVASTEISNNDSDSFIKQIKEEKDQFEGQVNFLNTVIVDMQRKNDELRTRIEIFEL
GNVSDDTKANMNGISHLVAPRMYCDICDCFDAHDTEDCPKQASSDSPPPSLHHGQRGTIR
PYCDTCEVFGHETGECSDETF
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccaagagcctcaggtctgcgcgtccctgtgcgcgttgggcgtccggggccg
actctctgcactcagcactcccacgagctgccctcaccgcagccctctaaggcctccaga
gtcgcccctctctccacgccctcgccttctgcaggagccaacggtgaacgagtcgacgcc
gaagtggagaagctgcgtcgcttgagtcaagagctcgccaggaaggaagagttctaccta
ctcaaccgtaccaccagccccaaaagttggtggccgtcacccagacacctctcgttcagt
aaggacaacacgtacatttataataacaacaacgacgtcctccccagcaacaacaacctc
ctcaaccacttcaacgcattaaagagtgtcgaccatcccgtcagtctgcactacaagcgg
gccaagtcccctctgagagacaacggaaccttcccttgtgaggtccacggcaggaaggcg
gcaccagaacagacgttcctggccaacaccctccctgatcttccttcttacaagatgccg
tctcagagacgcttcagcgacgaggtcaacttccgtcgaccactggccacactccacgag
gaccaggtggtggccagacgtcgcttcagcgaggatgtccgcaagaagtctcttgatacc
agcggcgtcctcgacgatctccacaaacagcatcgtcgactctccgaggctggagttcgg
cgcctctctgatgcatctatcgtgctgacagaggacactgacagtttcatcattggtgac
agagtatgggtgggaggtaccaagggcggtgtcatttcatacattggagacacgcagttt
gcaccaggagagtgggctggggtcacccttgatgaacctattggtaaaaatgatggaagt
gttgcaggtatacgctactttcagtgtgaggctaaaaagggagtattttcacgactcact
cgactctctcgatctcatctcactgatcaagacatagagatcctgacctcacgatcttcc
tcagttggggcagagtctccaaaatccaatgggactcctgcaacaagtgtggcctcgggc
cccacaactaccacacgtaagatcacaccatccagtgctcccacgagcgccaaaccttct
gctactgctgcttctgttaagtcagtttctcctgcacctgcttccacacccaagaaaacc
tctagctctggtccagtttcatcttcatctgatccgaaggttggggatcgtgtggtcatc
accagtgctgttggttcccgacacggcacccttcgctttatagggaagacagactttgcc
gatggtatctgggcaggagtggaattggaagagcctactggcaaaaatgatggatcagtc
gctggcaaaaaatactttgaatgcaaagacaagtatggactctttgctcccattgctcgt
gtaggcaaatgtgccggcagcgcagcttcaccccgtcggacttctgtagtaccccagact
ccccgtcccacaattcggcgctccaacagtagggagtctctgggtggatcgtctgttgcc
tcgtccaccgcttcatccgtacggggtacccgggtaagacttggcgtcacatccctcaca
ccaggccagaggccaactaggattgccacatcatctgttccaagcaccaaggcactgcag
gaggctctagcagaaaagacgcaacatgtggaccagctcatgcgagaacgtgatgtggaa
agagccgaggttgctcgtatggcagcacaggcggacgaagcaactagggcagctcatgac
atgcggctacagcttgatcagctgcaagaggagtccgaagaacgcttgcacgactttggt
gaacggattcgtaatttggagaaggagagagaagatttcattgctaaacttgaagataag
cagagagaactcgatgatctagcattcaggctagaggaagaatccatcaccaaggcagat
ttggagagtttggcactgctggaatcaagtcaaagtacaacagatggagagaagatgaaa
ggaatggagaaggagctggaagaggcacgacggaagctgaaagaacgaggaacgatggaa
gcaaataaagcatttgaaatggaagaattggaaataaaccttcgagctagtgtggaagag
cttcaagcaagaataatggaaatggaaggagacaaggaatctctggaaaatgtgctatcc
aagcagtcggagcagctcaaggtgctggagaccaatgcagaggcactaaggaatgacatt
aatgaacgtgaacaaaagatcaagctattagaatctagtaaagaagaagaccaggctcgt
tctaaagaaagatctttagaaattactgagaaagatacacgaatacgagaactgcagctg
gaacttgataaaacgtcaaaggaagtgaatactgcatcacaccaacttgaagaaatgtca
aataaatttgcaaatgaaaaatctgaaaaagattctttactcaaagaaattctaggaatt
cgagagcagttgaattctgggtcgtctgaaacctcaactcttatgggagagatcagtaag
ctgaaggaagaactgagagaggcaactcgtcatcatcaacaagctgctgaaaagataaca
ttattagagtgccaaaaatccaagttggaagcggaacttgaaaatgctaactcagtggta
tctagtgtcgacggaaagctcacgcaagctatgtcaagccttaaattaaaagaggagcag
ctacaaaacctcatggaaagactacagaaaactgagctgtgccttaaggaagaacaagag
accagagtcatcgagaagcagacagctgaaaaacaacatttacaaaaggaggaagaacac
attcaaaaaataaagatatttgaggaaaagacaaaagatctggaaagccgtattgcagct
aaagaagcagagatcaatgaatctaatcggcagctgacaaaggtggaatccaaaattgct
gcgctggaagtggagcgagtacagctaaaggaacaggtggcagcttatctctcctcatct
tcgggttcttctgaacaacttgcgaccctgaagaatcaattgcaagaaaaagacaagcaa
attgaaaatgtccaagtgtcgctgcaagagaaaattgctgcattatcacaagaacaggcc
gccagagcaggtgataacgacacggccaggcaacagttacagcaggtgaaggaaaaatat
gaaaaggaattagatgaaatgaaaaaaaatcttctcaacctggaaaaggaaattggtgca
aaggtggaagaaattctcaaccttaagaagcagcatattgcagaacaagaggaactcgta
aagaaaaaggatcttgaactttatgagctgcaagagcaggtcatgctgaaggatggagaa
ttatctgagttagaggacaaaataaaatgcctagagagtcaagtagatgccatgacgtgt
gcgtctgccgataaagtgggaagcatggagaaggctcttggggatgtgcgtgtggagaag
gaacgactgctcagagagatagaagaggtattgaaaagtaaggtagaattagagcaacaa
ctgtcagccctggacaaagaaaaccgtaaactacgcaccgagcaggaagagaacctcttg
gcggttactcaaaaggatcagaaggtggcagccttgaaagctgaagtggaacatttgatg
acaacgtttaatgctcatcgtgaggacgtgcagaaacagttggtggatgcacaggctgac
aaggaggctatggcccacattcacaagacctttgaaaaggaactagtgcggttgaactgc
ctgcaggagagtctgtcagcatcagaggaagagaaaaacaccctgcagacacacataaat
caattacaagaagaactctcacgattaaagggcattgaggaagaaaatatgaatcttgca
aaagaaaaagataaattacaagttgaattacagaaaattaaagttcttgaaactgaaaac
ttatctcttttgaacgaaagaaataaactcgaggacgatcatagggaaatgattgaggac
ttaagaaaacagaaagatgagctgcttgaagagaagtgcaagatggaagaagagatcaga
agcctgaggaagtgtgaagaggagaggtctagactgggcggagatgttcagagactggag
gcagaactaactaaaatgatgcaaatacaagaaagtaacaccacattaacatcacagctg
gaaaaactgaaagcagaaaaggcagaacttgtgtccagtacaaaagttaaagaggaacag
ttgatactaaaaaaacaacttgaggaggacaatattcgattaaactcaagtataaaaagt
tgcacagaagaaaaaaataagctcatgattgacatacagaggctagaggctgaaactgcc
tgtagactgaaagatattgagagtgaatataatagagttaaggacacagtgcaggtgctt
caggaggagaagaagatgagggaggaagagaaggagatactaaaggaggaaataaagaaa
cttagattagtggaggaagagaagaaggatttagaatcaaaaaatatagttcttacccag
ggtatggaggagcttaaacagagccacgagggacgtattggtgaatttgaagtagagaaa
tttaatctagtcgaagaagtggtgagtctacaagatcagctgtctgtcctcaagacagag
atggttgaaacaactagaaaaatggaggaggctaacgctgctgcagaagctgcaggcatt
cttcgggcaaaaatcaatctccttgaaacagagaaacgtagacttgaaagcaaaatagtc
gatttgcgggttcaagtagcatcaacagagatcagcaataatgattcagatagcttcata
aagcaaataaaggaagaaaaggatcagtttgagggacaagttaatttcctgaacactgta
attgtagatatgcagaggaaaaacgatgaacttagaacccgcattgagatttttgagctc
ggaaatgtatctgacgacaccaaggctaatatgaatggaattagtcatttagtagcaccg
aggatgtactgtgatatatgtgactgttttgatgcccatgacacggaagactgccccaaa
caggcttcctcggattctcctcctccttcccttcaccacggccagagaggcaccattaga
ccctactgtgatacatgtgaagtgtttggacacgaaactggcgaatgcagtgacgagact
ttttag
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