Procambarus clarkii (red swamp crayfish): 123764752
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Entry
123764752 CDS
T07930
Symbol
Atg17
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123764752 (Atg17)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcla01009
]
123764752 (Atg17)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123764752 (Atg17)
03029 Mitochondrial biogenesis [BR:
pcla03029
]
123764752 (Atg17)
Protein phosphatases and associated proteins [BR:
pcla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123764752 (Atg17)
Membrane trafficking [BR:
pcla04131
]
Autophagy
Autophagosome formation proteins
ULK complex
123764752 (Atg17)
Mitochondrial biogenesis [BR:
pcla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123764752 (Atg17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
TBK1_ULD
ubiquitin
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
123764752
NCBI-ProteinID:
XP_069193835
LinkDB
All DBs
Position
5:complement(397673..516035)
Genome browser
AA seq
1458 aa
AA seq
DB search
MIYVFLVDNGTMKTFDMNLALENVSVLKEEVHRTLKVPPEKQVLLISGGEALDPDQRVCQ
YSAGTDTNPIFLFSKTTIEKQNPPVPCVDYCTDTDLKDQVEGTLNMPASYNTVVARAQLA
QQFHEQSREEIRASQQLVHDQHLQQQGWAAVVANLEDIVADFRNRFENFYQSFKEYLTGR
EEKFQILNNFDNDLKLLSRIPVLPALLGTNDTSVAGKMEETEVNTNDDGEKVDLAVKPPM
SLLEWISAKDSQSNVEVIAKLCFRGLTQINEPMLIQLEAEVSAAIQEADRSQMKEIKGLG
ERLFGLEQLMHESNKIVQEQNIIAEALLQNQNRAGKVNDPSIFPDLCTSHRKNLSHMLKN
HLRVQEIRKRCSKAKDELSENLHVRLKWIMYIERKLYELDSKLTMHTENVRRLTGLLQVV
EQIHRAPQVYVEAITEVARRHTFSQSFVQWATILSKESWEVWQQELTTRQQFIQHFSSHF
LAILFPGMDDLPPDFATQPPNKFDDTLPKLTKENIDELRAILPELASMLVVKEVMAVPPL
LQSALQSQVTTIQTPRVSEMHLKEGSGDVYASAVTTTTSVTPRNTPDRDTIARGQQLQPP
SLTREHHESETDTEEFEKVVCSEGSDGAFSPMEVMPESSRGTMKTKHHFSSQVNESKHIK
LDGGHGPTSSPNITDPEELRQGSVASASPQEPLHSPESVLTSQEFVTAEFYIDESMPSSY
TESGGTANSSSRHPPSLVKTHHVITAELQQQLEERDAIITTLQSDLSEAKEEAERLRLRL
CALASLSCQDEVLSLKTELASLRGKVHDEGKSYLNYISELSSRILDLLLQIQVQTSADQS
AAVSEAVKLARADEERLQEQLRGTLDLQAHKLNDAQREIEVYQEQLHRQQENLQQTTVEF
EEAKRMLIEEKVEAVKRLTLEHELEMDSLKERWRGDDTSRQEEITSLTQKLHDLEEALED
AKQERSELEKSFQSRFEMHIQEEKDKIVQILEVSFTEREKKALETLREQLVQEHQLQVNR
LLKEKEEAIQAACEEVRTKLVVEWREVVEQQHKDLTEKHNTHLAQCQHQWEQDKQAELAT
KVAEIDSRWREERDSNVERVRQQYKMELEGLRSRFRMMTTASMDKSPSETSLEKFERGEF
LDLGAHEAALARLREELIKEKEAALEATQLSLQEQFAQAQEEAMQKHQEMRKEERRRIEA
EKQIVFNDAIKSVTQDKERVIEDLRLRVELLTDETEKLRRLMHHAATESSDQLITALARE
NEVYKERCEMLQKDIIRLEGEVLRAKRLSFVVATERPTDLSMSFTDAGATLTTPLGSLSA
NEDVRKLQQENQELRDKLTRSATSLVERGKISVHSCQAGEAVLLVWDEHHLHYRVLLEGN
PYLHFLHIDSYGPLSLSKELPHQKMYCTAEVVSKEFCQAKKVSPVHCSALAPAPLPLNVF
TTCLWRMKILALGPRLPN
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgatatacgtgtttcttgttgacaacggcaccatgaagaccttcgacatgaacctggca
ttggagaacgtgtcggtgctgaaggaggaggtgcaccgtacgttgaaggttccgccagaa
aaacaggtcctgctcatctctggtggtgaagcactcgaccccgaccagcgggtgtgccaa
tactcggctggcaccgacaccaaccccatcttcctcttctctaaaactaccatcgagaag
caaaacccacccgtgccctgcgtcgactactgcacagatactgacctaaaggaccaggtg
gagggaacgctgaacatgcccgctagctacaacaccgtcgtggcccgagcacagttggca
cagcagttccacgaacagtctcgggaagagatccgcgccagccagcagctggtgcacgac
cagcacctccagcagcagggatgggcggctgtcgtggcaaatcttgaggacattgttgcg
gatttcaggaacagatttgagaatttttatcagagtttcaaggagtacttgacaggaaga
gaagagaagtttcagatacttaacaattttgataacgatctcaaactactatcaagaata
cctgtgcttccggctcttctggggacaaacgatacttcggtggcaggaaaaatggaagaa
acggaagtaaacacaaatgatgacggagagaaagttgacctcgctgtgaagccaccaatg
agcctgcttgaatggatcagtgccaaagacagccaaagcaacgtagaagtgattgcgaag
ctctgttttcgaggcctcacgcagatcaatgaaccaatgttgattcagttggaagctgag
gtatcggcagctattcaggaagcagaccgctcacagatgaaggagattaagggcctcggc
gaacggctctttggcctcgaacagctgatgcacgagtccaacaagatcgtccaggaacaa
aacatcattgccgaggcactactacagaaccaaaatcgtgcagggaaagtgaatgacccg
tctatcttcccggacctgtgtacctctcaccgcaagaacctgagtcacatgctcaaaaat
cacctccgggttcaagagatcagaaaaagatgcagtaaagccaaggatgaactttccgaa
aatttgcacgtcaggttaaagtggatcatgtacatagagaggaagctgtatgaactggac
agcaagctgactatgcacactgagaacgttcgccgcctcacggggctgctgcaggtggtg
gagcagattcaccgagctcctcaggtttacgtcgaagccatcaccgaggtcgcacgtcga
cataccttctctcagtcttttgttcagtgggcgacaatattgagcaaggagagttgggaa
gtgtggcaacaggagttgacgaccaggcagcagttcatccagcacttctcgtcgcacttc
ctcgccattctcttccctggtatggacgacctcccgcccgacttcgccacccagccaccc
aacaaattcgatgacactctgcccaagctgacaaaagagaacattgacgagctacgagca
atactgccagagctcgcgtccatgctggtggtcaaagaagtcatggctgttccaccattg
ttgcagagtgcactacaatcccaggttacaaccattcaaactcccagggtgagcgagatg
cacttgaaggaaggaagtggggatgtgtacgcctcggctgtcactacaaccacttcggtc
actccccgcaacacacccgaccgagacaccattgctagaggccagcagttgcaaccgcct
tcactcacaagggagcaccacgagtctgaaacagacactgaagagtttgagaaggtggtc
tgcagcgaaggcagtgatggtgcgttctctcccatggaggtgatgcccgagagcagtaga
gggacgatgaagacgaaacatcacttctcctcgcaggtcaacgagtctaagcacataaag
ctggatggtggccacggtcccacttcttcccccaacattacagaccccgaggagctgagg
caggggagcgtagcctcggcgtccccccaagaacccctgcacagtcccgagtcagtgctc
acgtcccaggagtttgtcaccgccgaattctacattgacgagtcgatgccctccagctac
accgagagcggcggcacggcgaactccagctcgaggcatcccccttccctggtgaagacg
caccacgtcatcaccgccgagctgcagcagcagctggaggagagggatgcaatcatcacc
acactacagagcgatctgagcgaagccaaggaagaagcggagagactacgtctacggctc
tgtgcattggcatctctgagttgtcaggacgaagtgctgagcctcaagactgaactggca
tctctgcggggaaaggttcatgacgaagggaagtcgtacctcaactatatctccgaactc
tcgtctcgaatcttggacctcctgctacagattcaggtacaaacatcagccgatcaaagt
gctgcagtgagcgaggccgtgaagttggctcgcgcagatgaagagaggcttcaggaacag
ttgcggggaacactagacctgcaggcccacaagctgaacgatgcccagcgtgagattgag
gtgtaccaggagcagcttcatcgtcagcaagagaacttgcagcaaacgactgtggagttt
gaggaggcaaaaagaatgttgatagaggagaaagtggaggctgtgaagcggctgaccctg
gagcacgagctggaaatggattccctgaaggagcgttggagaggcgacgacacatctcgg
caggaggagatcacgtcacttactcagaaattacacgacctggaagaagctctggaggac
gccaagcaggagcgcagtgagctggagaagagcttccagagccgctttgagatgcacatc
caggaggagaaagataagatagtgcagatcttggaggtgagcttcaccgagagggagaag
aaggcactcgagacattgcgagaacagctggttcaggagcaccagcttcaggttaacaga
ctgctaaaggagaaagaggaggccatccaggcagcgtgcgaggaggtccgcaccaaactg
gtggtggagtggcgggaggtggtggagcagcagcacaaggacctcaccgagaagcacaac
acccatctcgctcaatgccaacaccagtgggagcaggacaagcaggcggaactggccacc
aaggtggccgagattgatagtcgttggagagaagaacgggactccaatgtggagcgtgtt
cgtcaacagtacaagatggagctggagggcctgcgctcacggttcaggatgatgacgaca
gccagcatggacaagtctccctcagaaacatcactagaaaagtttgagcgaggcgagttc
ttggacttgggggcccatgaggcggcactggccagactgcgggaggaactgataaaggag
aaggaggcggccttggaggctacgcagttgagtctccaggaacagtttgctcaagcacag
gaggaggcgatgcagaagcaccaggagatgaggaaggaggagagacggagaatagaagcc
gaaaagcagattgtgttcaatgatgccataaagtcggtgacccaagacaaggagagagtg
attgaagacttgcggttgagagtggagctcctcaccgatgaaaccgagaagttgcggaga
ttgatgcaccacgcagccaccgagtcttccgaccagcttataaccgccctggccagggag
aatgaagtgtacaaggagcgatgtgagatgctgcaaaaggacatcattcgtcttgaagga
gaggtcctgcgtgcaaaacgtctgagcttcgtggtagccacggaacggccgactgacctc
tccatgtctttcacggatgccggtgccaccttaacaacgccactgggttccctgagtgcg
aatgaggacgtgagaaagttgcaacaggagaaccaggaactcagagacaaactaacccga
agtgcgacatctctggtagaacgtggtaagatcagcgtgcactcgtgccaggcaggcgag
gcagtgttgctggtgtgggacgagcaccaccttcactacagagtccttctcgagggtaac
ccctacctccacttcctccacatcgactcctacggccctctcagtctctccaaggagttg
ccacaccagaagatgtactgcacggctgaggtggtgagcaaggagttctgtcaagccaag
aaggtaagtcctgtacattgttctgctctggctcctgcccctcttccactcaatgtgttt
actacttgtctctggagaatgaagatattagctcttggaccccgccttcctaactag
DBGET
integrated database retrieval system
