Procambarus clarkii (red swamp crayfish): 123764984
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Entry
123764984 CDS
T07930
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123764984
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcla01009
]
123764984
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123764984
03036 Chromosome and associated proteins [BR:
pcla03036
]
123764984
Protein phosphatases and associated proteins [BR:
pcla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123764984
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123764984
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123764984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
123764984
NCBI-ProteinID:
XP_045609243
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All DBs
Position
29:6778681..6844423
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AA seq
479 aa
AA seq
DB search
MSGMVARGMIRQSSLTRLGLMINTAVTGVVSNTTNNKRGNGDIQWCFSQVKGTLDDDVSE
ADIISCVEFNHDGDLLATGDKGGRVVIFQRDPSSKNCHPRRGEYNVYSTFQSHEPEFDYL
KSLEIEEKINKIRWLKRKNPAHFLLSTNDKTIKLWKVSERDKRAEGYNLRDESGQIRDPT
SLTSLRVPVLKPMELMVEASPRRIFANAHTYHINSISINSDQETYLSADDLRINLWHMEV
TDQSFNIVDIKPTNMEELTEVITAAEFHPHDCNVFVYSSSKGTIRLCDMRQAALCDSHSK
LFEEPEDPTNRSFFSEIISSISDVKFSNSGRYMISRDYLSVKVWDLHMETKPIETYPVHE
YLRSKLCSLYENDCIFDKFECCWSGNDSAIMTGSYNNFFRMFDRTSKRDVTLEASRETAK
PRYLLKPRKVCTAGKRKKDEISVDCLDFNKKILHTAWHPHENIIAVAATNNLYIFQDKF
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcatggtggccaggggcatgatccgccagtccagcctcaccaggctgggcctc
atgatcaacacggctgttactggcgtcgtcagcaacaccacaaacaacaagagaggcaat
ggagacatccaatggtgcttctctcaagtcaaagggaccctagacgatgacgttagtgaa
gcggacatcatctcctgtgtggagtttaaccacgatggagacctgcttgccactggagat
aaaggtggcagagttgtcatcttccagcgggatccctcgtctaaaaactgccatccccgg
cgtggcgagtacaacgtctacagcaccttccagagtcatgaaccagagtttgattatctt
aaatctttagaaattgaagagaaaatcaacaaaattagatggctcaagaggaaaaaccca
gcacactttttactctctactaatgataaaacaataaaattatggaaggtgtcagaacga
gataaacgagcagaaggttacaatttgcgtgacgagtccggccaaatcagggacccaact
tcactaacttctttaagggtgcctgtattaaaaccaatggaacttatggtagaagcctca
cctaggagaatttttgccaatgcacatacataccacatcaattctatttcaattaattca
gaccaggaaacatacttgtcagcagatgacctccgaatcaatctatggcacatggaagtc
acagatcagtccttcaacattgtggacatcaaaccaacaaacatggaagagctgacggaa
gtgattactgcagcagagttccacccccatgattgcaatgtgtttgtttactccagcagt
aagggaactattcggctgtgtgacatgcgccaagctgctctctgtgatagccactctaag
ttgtttgaagaacctgaagatcctacaaatcgtagctttttcagtgaaattatctcctcc
attagtgatgtaaagttttcaaatagtggtcgctacatgatttcacgggactatctctcg
gtcaaagtatgggatctacacatggaaaccaagccaatagaaacttatccagtacatgaa
tatcttcgctcgaagctgtgctcattatatgagaatgattgtatatttgataaatttgaa
tgctgctggagtgggaatgattctgctatcatgacgggctcgtacaataacttcttccgc
atgtttgatagaacatccaaacgagatgtcactctagaggcctcaagggaaacagctaaa
cctagatatttactaaaaccaagaaaggtgtgcactgcaggtaagagaaagaaggatgag
ataagtgtagactgccttgatttcaataagaagattctccacacggcctggcacccacat
gaaaatattatagctgttgctgcaactaacaacctttacatattccaagacaaattttaa
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