Procambarus clarkii (red swamp crayfish): 123764992
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Entry
123764992 CDS
T07930
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcla03009
]
123764992
04121 Ubiquitin system [BR:
pcla04121
]
123764992
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
90S particles
Other 90S particles
123764992
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123764992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Sof1
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
NBCH_WD40
PROPPIN
Beta-prop_DCAF4
WDR54
Motif
Other DBs
NCBI-GeneID:
123764992
NCBI-ProteinID:
XP_045609259
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All DBs
Position
29:6946809..6954020
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AA seq
470 aa
AA seq
DB search
MSIKSIKVLSRNPDHHLRETKNDIHKVQRNYDPDLHPFEAVREYKLALNAVKLERVFAKP
FIGSLVHSEGVSAICRHPSRLSCVFTGTVEGELKLWDITHKKCEWTIQAHNGQLWAITAA
PDGASFFSVGNDKTIKRWSLQRAQEENEDLPIDTWLCDSIITGITHHRYKNEFITCGERV
LLWDASTKAPKFSYDWSTSGDRNDASVVSVKFNPVETDLFASSDHANNIVLYDTRAKEVK
KLKMTMRVNALAWNPMEAFILTAASEDYNVYSFDIRNMNKQNRVINIHEGHTSAVIDLDY
APTGREFCTGSYDKSIRIFKTDEGRSHDVYHTKRMFKVNCVLWSGDNKYILSGSSDHNVR
VWKAKSNEKMGIMRARERSAINYAEELKRKYGHFPEMRRILRHRHLPKHIYHAKQEHRIM
KDSRARKEANLRRHSKPGAVPYVPARQKAVVGLQDDEADMPSTSHADSDE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataaaaagcatcaaagttctatctagaaacccggatcaccatcttagggagact
aagaatgatatccataaagtgcagagaaactacgatccagatctccatccttttgaggca
gtacgagaatacaagttggccttaaatgctgtcaaactagagagggtgtttgccaagcct
tttattggaagtctcgtgcattctgaaggagtgtctgccatatgccgtcacccaagtaga
ctgtcctgtgtgttcacaggaacagttgaaggggagttgaagttatgggacattacccac
aaaaaatgtgaatggaccattcaggctcacaatggtcagttatgggcaattacagcagct
cctgatggggcttcattcttttctgttgggaatgacaagaccataaagcggtggtccctg
caacgggctcaggaagagaatgaagatctaccgatagatacttggctgtgtgattcaatc
atcacaggcatcacccaccacagatacaaaaatgagttcatcacatgtggtgagcgggtg
ttgttatgggatgctagcaccaaagcccctaagttctcctatgactggagtaccagtggg
gatcgcaatgatgccagtgtcgtatctgtcaagttcaaccctgttgaaactgacctcttt
gcttccagtgaccatgcaaataacattgttttgtacgacacccgagctaaagaggtgaag
aaattaaagatgactatgcgtgtcaatgccttggcttggaaccccatggaggcattcata
ttgacagcagccagtgaagattataatgtctactcattcgatatcagaaacatgaataaa
cagaacagagttatcaatattcatgagggtcatacgtctgctgtcattgatcttgactat
gccccaactggccgagaattctgtacaggaagctacgacaaatccatcagaatttttaag
acagatgaaggaagaagtcatgatgtttaccatacaaagagaatgtttaaagtgaactgt
gttctctggtcaggagataacaaatacattctctctggctcctctgatcacaatgttcgt
gtgtggaaagctaaatcaaatgagaagatgggtattatgagagccagagaacgttctgcc
atcaattatgcagaagagctcaagagaaagtatggtcacttcccagaaatgcgtagaata
ttacggcatagacatttgcccaaacacatctaccatgccaaacaggaacatcgtattatg
aaggacagccgagccaggaaggaggctaatcttcgaagacactcaaagcctggcgcagtt
ccttatgtacccgcaagacagaaggctgtggtgggtttgcaggatgatgaagctgacatg
ccaagcacttctcatgccgacagtgatgaataa
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