Procambarus clarkii (red swamp crayfish): 123764999
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Entry
123764999 CDS
T07930
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123764999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123764999
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
123764999
Membrane trafficking [BR:
pcla04131
]
Endocytosis
Macropinocytosis
Sorting nexins
123764999
Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
123764999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Motif
Other DBs
NCBI-GeneID:
123764999
NCBI-ProteinID:
XP_045609265
LinkDB
All DBs
Position
29:complement(7679465..7706814)
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AA seq
439 aa
AA seq
DB search
MFFYPSSSSYQRLTLDGQRLCHLLYFTAMMDGMEEVLHSETNGTKSGRSDTVDLNDSSLQ
VDISDALSEREKVKFTVHTKTTLPEYSKPEFSVVRQHEEFIWLHDRFDENEDYAGYIIPP
PPPRPDFDASREKLQKLGEGEGSMTKEEFSKMKQELEAEYLATFKKTVAMHEVFLTRLAQ
HPVFRTDHNFKVFLEYEQDLSVRTKNKKEKVEGLFKSFNKSTDEILLSATQKDVDDYFEK
EKGFLLEYHTAIKDATIKADKMTQTHKNVADSYIKLSTGLSQLGTIEGPRLEKFINKVAD
TFEKARKVEGRVASDEDLKLSDTLRYYVRDGSAAKDLLYRRLRCLANYEQANKNLDRARA
KNKDVHAPVDVADAELAQQNACERFEHMSSRAKEELGDFKSRRVAAFRKNLIELAELELK
HAKAQAQLLKNCLQALEEE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgttcttttacccgagctcctcctcctatcagcgtctgacacttgatgggcagcggtta
tgtcacttattgtatttcacagccatgatggacggaatggaagaggtgcttcacagcgaa
acaaatggaacgaagagtgggagatctgacacagtggatctcaatgacagctcactgcaa
gtggatatttctgatgccttgagtgaaagagaaaaagtcaagtttaccgtccatacaaaa
actacccttcctgagtacagcaagccagagttctcggtagttaggcaacatgaagagttc
atttggctacatgaccgttttgacgaaaatgaggactatgcaggttatattatccctcca
ccaccgcctcgtcccgacttcgatgcatcgcgggaaaaactccaaaaattgggagaggga
gaaggcagcatgactaaagaagagttcagcaagatgaaacaggagctggaggctgagtac
ctggcaaccttcaagaagacggtagccatgcatgaagtcttcctcaccagactagctcag
catcctgtctttaggactgatcacaacttcaaggtcttcctcgaatatgaacaagatttg
tcagtgagaacaaagaacaagaaagaaaaagttgaaggacttttcaagagtttcaacaag
tcaacagatgagatcctgttgtcagccacccagaaggatgtggatgattactttgagaag
gagaaaggtttcctccttgagtaccacacagccatcaaggatgcaaccataaaagctgac
aagatgacacagacacacaaaaatgtggctgactcgtacatcaaactctcaactggctta
tcacaacttggaactattgagggccctagactagaaaaatttattaacaaggttgctgat
acttttgaaaaggctaggaaagttgaaggcagagtagcatcagacgaagatttgaagctt
tcagatacccttcgatactatgttagagacgggagtgcagcgaaggacctcttatatcgt
cggcttcgatgtcttgcaaactatgaacaagcaaataaaaacttggatcgagcacgtgcc
aagaacaaggatgtccatgcacccgtggacgttgccgatgcggaactagcgcaacagaat
gcttgcgagaggtttgaacacatgtcatcaagagccaaggaggaactgggtgacttcaag
tcgcgtcgtgtggcagccttcaggaagaacttgattgaacttgctgaactagaactaaaa
catgcgaaggcacaagctcagcttctgaagaactgcttacaagcccttgaagaagagtga
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