Procambarus clarkii (red swamp crayfish): 123765001
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Entry
123765001 CDS
T07930
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcla03021
]
123765001
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123765001
5.6.2.5 RNA 5'-3' helicase
123765001
Transcription machinery [BR:
pcla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123765001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
AAA_19
UvrD-helicase
AAA_30
Viral_helicase1
ResIII
Yop-YscD_cpl
UvrD_C_2
NAT10_TcmA_helicase
DEAD
AAA_22
AAA
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123765001
NCBI-ProteinID:
XP_045609268
LinkDB
All DBs
Position
29:7752238..7780168
Genome browser
AA seq
2346 aa
AA seq
DB search
MEFHLLRLGTNKRYILNPQQDRFLIGRNNSCDFIFTSPHISRQHCEIQRVPPNGTLIIKN
LKGTNSTYVDDLHLQDVTRYAELRKGCKIGLGVPLSHVEDGIANNNYVFLQLCQSQPTED
SINVKQEQARALSSGDHAEPSGSDASFINKSSGLQTGSQKHGPVSHTIDHTIQQPGSSRQ
SIQGVPLSRANVGHPLASKYNFTSENPSNLGLQNTDTRPLPLVSLPQTTRSTSTVTHLPP
CKPMRHLSMTQTQSRIQEPLSELHLQNNDHDSPQGLYVSNSLSSECKKGYPNQMAALPIT
YTTARSQSDIQSEDGIYEPQSEPRSAQGHQGMNKTHHEPREQIHHEQDNKNAFREVHKNS
SPIFHQKDESTSSLCNPKAAVRSSFHTGSEFLVPNSKQIRIQTRLEQDSHQTKPSARIAP
VQIQSSNNLLPISDLSHSSSNVLPLYQIPKDYRITPSLHNIPAASEDVLPRNQLPNDSRL
HQTSQRLTDRVLSENIQEGNLPVESKVYSDKALALSIDNEDSNLGINIGSSDTKSGSLVE
KSTPENRRNRQTHEPNVIVVDIDDIDDNDSSMSIDLTQSDTESLQTNRINNVDANISCDK
DNELIKGLQTEEQINVADETRGNLAPVKKTDVLGKRKRNITEKSIEEMNKSVENPNKYLK
KVHLSESSKLQSEREKSSNEQVMNTDSKANESKYSTVKPISLKETLRDWRYKSCSIAVER
LPSALLNKASEGKVIISDENKSITLQSPVSEVNKTPSPDGINVPVKNSLLMLDDDDDDDL
PDINMPLVSKKHTSHSPLLHSSESTESKMKINDHSRNAKVIKRRDSEGSFRTSKINAPGR
RHERQSSHDSLQSTDAAADQALPQGRDIMDKVEPSSTSGEKSRLLDQACYNNISSAIRKT
TDSVFNTSEASISRKKKCSKLDSSAERISTRKTSDTAFNISEASTAIKKNSNEYISPAER
ISTGQNCIDDASTSDVLINSGLPPNIKIKKEKIEELCLEKIKIKKEKVDNENSDIKVKIE
RDENSEHVLEKELEEDDVICIYSQVDETIWVSSDEEESTSQDISFGPMPSSPDLDIEDLF
REDEEQKQNQVSTNLSKNDIPEEEVANDDLWFPVLSQSFFDDDIERKGSKSTSDMNFQES
LPGPSGINTNKVNDNDDDDDDDDLSTSKWWPVLSQDFLHEINNDKVACASKDNQAPPDCS
RNLNAIIEKLGNKNKRTAQLTDPKMPPPRTKSNNLRKRSRSQEYYGVKSHRDSSDYLFDR
RSKDTRHERRNEEPVSKIKKSEEKFTRRRTMSTPPQRMKHRKSSHLRENLTTKFNLKPYK
ATMEHKPREKHHLVPKVKKEHQTAKDDDKRKAVNRKSHLVIDQPRAGENISIQKKNVQKE
CQPQEKPRTKVAAKVTRKTRSERLIDVDIFSSSIVPSHKNKKSSYKIPKNSEKDAIPKNS
EKDATKITKSNVIAPEVGLVLTKSSKNMSSNILPPVKEPQNKVVLPDSDQENTTLLFQTD
KENKIFNNNGEKPQGSTGILKLAFETHDTKKKKVHFPSNSEDLVSTLAISPRKDCNRIGI
PEVRAREVLPKELVMWKNPIPPNFMDHFIYHICRWNYDWLEVYKLDQQKREISGKGCSRP
PPVVTSTNYPTLILYNSFDDYKEIFSNLMYLEIWESIYQDWMKYKHSNIWLPTQVDGVRE
AFVETGRNPLKFWTLNMFTLIAQDQSNKGLHPRQGSLISLRIQEGVKKMHIFGHVEFFQK
KRKRMISRELEQACPYGEVCLMMVVRVAKEVIQKVRSGKIILISNVSYIRPSTRTWEGLC
KLPCSPLCQAILQPSKDVFKCEYEYGQYLVDGMSLNDVQVQAVREVSSKCVSSYHMPKMS
LIHGPPGTGKTRTITALIAQIVKLSSVRKLKFCRILVCAPSNAAVDELTLRLIKLREIGI
ALRVVRVGVKGSINHEIKNCTLDSFVEKQIKMELSSPKNVSAKQEWDRRSATVKEAADKL
QEARKANVNKAILTQMEIRLNQLVRSKCDFERSFRSQPTAQERYELQQKWQHQILINAQV
ITTTLGGCLSGAMSDVFGKIPDSFTCCIIDEAGQCKETETWLPLLFKIHKLVLVGDHRQL
PATVLSQLAQDKNLKQSLFERLYHRFMIELQLKEMIHTLNIQYRMHPEIAAWPSQHFYMD
MLTTHPNIADQRSCDLKPYIVFDLKTSQEQRDEKNELYNPAEASLIRLIIEVLEPQVGNQ
KIGVITPYQRQKFHLEERLGRYTGRLSLAINTVDAFQGQERDIVILSFVRANTAANIGFL
SQRQRLNVALTRARKVCYIVASLSSLSKNKDWQSLIQNAESRGLVSVITEKEELDKNYIK
SILQKQ
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atggaattccacctattgcggctcggcactaataagagatatatcttgaatccacagcaa
gatcgtttcctaatcgggcgaaacaattcatgtgattttatttttacgagtcctcacatc
tccagacaacactgcgaaatccagcgtgtacctcccaatggcacccttatcatcaaaaac
ctcaagggcaccaactccacctacgttgatgatcttcatctccaggatgtcactagatat
gcagaactccgaaaaggatgtaagatcgggttgggtgttcccctttcacatgtcgaggat
ggcatagcaaataataactatgtgtttttacaactctgtcaatcacagcctacggaggat
tcgataaatgtgaaacaagagcaggcaagagcattatcttcaggggaccatgctgaacct
tcaggaagtgatgctagtttcataaacaagtcttcaggtcttcagacaggatctcagaag
catggtcctgtcagccacactattgatcatacaattcagcaacctggatcatccaggcaa
agtatccaaggagtaccattatctcgggccaatgttggtcatcctttggcatctaaatac
aatttcacatctgaaaatccctcaaatcttgggcttcaaaatacagatacaagaccgctt
cctctcgtttccttaccacaaaccactcgcagcacttctacagtgacacacctgccaccg
tgcaagcccatgaggcatctgtcaatgacacaaacacaaagcaggattcaagaaccatta
tcagaattgcacctacaaaataatgaccatgacagtcctcaaggattatatgtttcaaat
agcttaagttctgaatgtaaaaaaggttacccaaatcagatggcagcattaccaataaca
tatacaacagctcgaagccagtcagatattcagagtgaagatggtatttatgaaccacag
agtgaaccccggtctgcacaaggacaccaagggatgaataaaacacatcatgagccacgc
gaacaaattcatcatgaacaagataataaaaatgcctttagagaagttcataaaaatagt
tctcctatatttcatcaaaaagatgaatcaacgtcaagcctctgtaacccaaaagctgct
gtccgcagtagttttcatactggatcagaattcctggtgcctaattctaaacagataaga
atacaaactcggttggagcaagacagtcatcagacgaagccttcggcaaggatagctcct
gttcagattcagtcttcaaataatcttttgccgatttctgacctttcacatagttcttcc
aatgttttacctttatatcaaattccaaaagattatagaattactccatctttgcataac
attccagcagcttctgaagacgtattgccacggaatcaacttcccaatgattcacggctg
catcaaacttcacagcgtttgactgatcgagtgctgagtgagaatattcaagaaggtaat
ttacctgtagagtcaaaggtttattctgataaagccttagccttgagcattgacaacgaa
gattcaaatttaggaataaatattggttccagtgacacaaaaagtggttcactggtggag
aaatctactccagaaaaccgaagaaacagacagacacacgaacctaacgtcattgttgtt
gacattgatgacattgatgacaatgattcatccatgagtattgatctcactcagtctgac
acagaatctttacaaacgaatagaataaacaatgtagatgcaaatataagctgtgacaaa
gataatgagctcataaaggggttacagacagaagagcaaattaatgttgctgatgaaact
agaggtaatttagctccagtcaaaaaaacagatgtgttaggcaagagaaagagaaatatt
actgagaaatcaattgaagaaatgaataaaagtgttgaaaatcctaacaaatatttgaag
aaagttcatctaagtgagtcgtccaagttacagagtgagagagaaaaatcttcaaatgag
caagttatgaatactgattctaaagcaaatgaaagtaaatattcaacagtaaaaccaatt
tccctaaaagaaactttaagagactggagatataaaagttgttcaatagctgttgaaaga
ttaccctcagctttattaaataaagctagtgagggtaaagtaatcatatcggatgaaaat
aagagcataacactgcaatctccagtgtctgaagtcaataagacaccatctccagatggt
ataaatgttccagttaagaatagtttgcttatgctggatgatgatgatgatgacgattta
ccagatataaacatgcctctggtcagtaagaagcatacttctcattctcctttgttgcat
agttcagagtccactgaatcaaaaatgaaaataaatgaccattctagaaatgcaaaagta
attaagagaagagacagcgagggcagctttagaacaagtaagataaatgcgcctggaagg
agacacgagcgtcaaagctcacacgattctcttcagagtactgatgcagcagcagatcag
gctttgcctcagggaagagatattatggacaaggttgaaccatcatctacaagcggtgag
aagagcaggcttcttgatcaggcttgttataataacatatcaagtgccataaggaaaact
actgattcagttttcaatacatcagaagcttcaatatctagaaagaaaaagtgcagtaaa
ttggactcttcagcagaaagaataagtacaagaaaaacatctgatacagcttttaatata
tcagaagcttctacagctataaagaaaaacagcaatgaatacatctcgccagcagaaaga
ataagtactggacaaaattgcattgatgatgcaagcacttctgatgtccttataaattct
ggccttcctccaaatattaaaataaaaaaggaaaaaattgaagagctttgtttggaaaag
attaaaataaagaaagagaaagtggacaacgagaatagtgatattaaggttaagattgaa
cgtgatgaaaattctgaacatgtactcgaaaaagaattggaggaggacgatgttatttgc
atatattcccaagtggatgaaactatatgggtttcgagtgacgaagaggagtcaacatca
caagatatctcctttggtcctatgccctcaagtccagacttggatattgaggacctgttt
agagaagacgaagaacaaaaacagaaccaggttagcacaaacctctcaaagaatgatata
ccagaggaagaagttgcaaatgatgacctttggttcccagttctgtctcaatcctttttt
gatgatgacattgagagaaagggatctaaatctacttctgatatgaattttcaagaatct
ttgcctggtccaagtggaataaatacaaataaagttaatgataatgatgatgatgatgat
gatgatgatttaagtaccagtaaatggtggccagtcctttcacaagactttttacatgaa
ataaataatgataaggtagcttgtgcatctaaagataatcaagcacctccagactgctct
agaaatcttaatgctattattgaaaaattaggaaataaaaacaaacgaaccgctcagctg
acagatcccaaaatgccaccgccacgaacaaaaagtaataaccttaggaaaagaagcaga
tcgcaagagtattatggagtaaaatcacatcgtgatagttctgattatttgtttgatagg
aggagtaaagatactcgacatgagaggaggaatgaggaaccagtttcaaagattaagaaa
tctgaggagaagtttaccaggcgaagaactatgtctactccaccacaaagaatgaaacac
agaaaaagttcgcacttgagggaaaatttaaccactaaatttaatcttaaaccatataaa
gcaacaatggaacacaaacctagggagaaacatcatcttgttccaaaagtaaaaaaggaa
caccaaacagccaaagatgatgacaaaagaaaagctgttaacagaaaatcacacctagta
attgatcaaccacgtgctggtgaaaacatttctattcaaaaaaagaatgtacaaaaggag
tgtcagcctcaagagaaacctcgaactaaagtagcagccaaagtcacaagaaaaacacgc
tctgagagattgattgatgtcgatattttttcatcttctatagtaccctcccacaaaaat
aaaaaatcaagttataagattcccaaaaattctgaaaaggatgccatccccaaaaactct
gaaaaggatgccaccaagataacgaaatcgaacgttattgctcctgaagttggccttgtc
ttaacaaaatctagtaaaaacatgtcaagtaatatattaccccctgtgaaggaaccacag
aataaagttgttctaccagatagtgaccaagaaaatacaaccttgctctttcagaccgat
aaagaaaacaaaatctttaacaataatggagaaaaacctcaaggaagtacagggatatta
aaattggcttttgaaacacacgacaccaaaaagaaaaaagtacattttccatctaattct
gaggatcttgtcagtactttggctatatcacctcgcaaagactgcaataggatcggaata
ccagaagtgagagcacgagaggttctgcccaaagaacttgtaatgtggaagaatcccatt
cctccaaatttcatggatcacttcatctatcatatatgccggtggaattatgactggcta
gaggtttacaaacttgatcagcagaaacgtgaaataagtggtaaaggttgttcacgccca
ccaccagtagtcaccagtaccaattacccaactctaatactatacaattcctttgatgat
tataaagaaatattcagcaatctcatgtacttagagatttgggagagcatttatcaagat
tggatgaagtacaaacatagtaacatatggctgcccacacaagtagatggggtgagagaa
gcttttgttgaaactggtagaaatccacttaaattttggactctgaatatgtttacatta
attgcacaagatcaaagcaacaaagggctacatcctaggcaagggtcacttatctctctc
agaattcaagagggtgttaaaaagatgcacatctttggccatgtggaatttttccaaaaa
aagcgtaagcgtatgatatcaagagaattggaacaagcgtgtccctatggtgaagtatgc
cttatgatggttgtgcgagtagccaaagaagttattcagaaagttagaagtggcaaaatt
attctgatcagtaatgtgtcatatattcgaccaagcactcgcacatgggagggattatgt
aaactaccttgctctcctctttgtcaggcaatcctgcaaccaagcaaagatgtctttaaa
tgtgaatatgagtatggccaatatttagttgatgggatgtccctcaatgatgtacaagta
caggcagttagagaggtcagtagtaagtgtgtgtctagttatcacatgccaaaaatgagt
ctgatccatggtccacctggcacaggcaaaactcgcacgatcacagctctcatagctcag
attgtgaagttgtcttctgttagaaagttaaaattttgccgtattttggtgtgtgcccca
tctaatgctgcagttgatgagctgacattacgactcatcaagcttcgggaaattggcata
gctttacgtgttgtgcgagttggtgtcaaaggaagtatcaaccatgaaatcaagaactgc
actctagattcatttgttgaaaaacaaattaaaatggaactttcatcacctaaaaatgtt
tccgccaagcaggagtgggatcgaaggagtgccaccgtgaaagaggctgcagacaaactg
caagaggccagaaaggcaaatgtaaataaggcgatcttaacccaaatggaaattcgtctg
aatcaactagttcgatcaaaatgtgactttgagagaagttttcgttcacagccaacggca
caagaaagatatgagctacaacaaaagtggcagcatcaaattcttatcaatgcacaagtc
ataacaacaaccctcggaggatgcttgtctggagccatgtcagacgtatttggtaaaatc
cctgatagttttacctgctgcattattgatgaagcaggtcagtgtaaggaaacagaaaca
tggctgccacttctgtttaaaatccataaactggtactagttggagatcatcggcaactc
ccagcaactgtactctcccagctggcacaagacaaaaacctaaagcagtcattgtttgag
cgactgtatcatcgttttatgatagaactacagttaaaagagatgatacatactctgaat
attcaatatcgaatgcatccagagattgcagcatggccttctcagcatttctacatggac
atgttaaccacccatcctaatattgctgatcagcggagctgtgacctcaagccatacata
gtgtttgatctaaagacttctcaagaacaaagggacgaaaaaaatgagttgtacaatccc
gccgaagcatcgctgatccgtcttattattgaggtcttggagccacaagttggaaatcaa
aaaattggagtcataacaccataccagcgacaaaaatttcatcttgaagaaagacttgga
aggtacactggtcggttgagtcttgctataaatacagttgatgcttttcaggggcaagag
cgagacatcgtcattctctccttcgtgcgtgctaacacagctgccaacattggatttctc
tcacagcgtcagaggttgaatgtggctcttaccagagcaaggaaagtctgctatattgtg
gcaagtctttcttcactctcaaagaacaaggactggcagtcactcatccaaaatgcagaa
agtcgtggtcttgttagtgtcataacagaaaaggaagaactggataaaaattatataaag
tctattttgcaaaagcagtga
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integrated database retrieval system
