Procambarus clarkii (red swamp crayfish): 123765063
Help
Entry
123765063 CDS
T07930
Symbol
vari
Name
(RefSeq) protein PALS2 isoform X1
KO
K28619
MAGUK p55 subfamily member 6
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123765063 (vari)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
123765063 (vari)
Domain-containing proteins not elsewhere classified [BR:
pcla04990
]
PDZ domain-containing proteins
MAGUK family proteins
123765063 (vari)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
PDZ
SH3_1
SH3_2
L27
PDZ_2
SH3_9
PDZ_Tricorn
PDZ_6
Motif
Other DBs
NCBI-GeneID:
123765063
NCBI-ProteinID:
XP_069189604
LinkDB
All DBs
Position
29:complement(11428732..>11453018)
Genome browser
AA seq
590 aa
AA seq
DB search
MLSVLLETDNVLYMIIQDPEEADLPPGQHEVQDTLEDGVGVVEPVSSGNGKLVSQIRLLC
EGSTSAPSQELADLLHRPHLLALLETHDTIADHRHTGDASTSRNGYNGVNGCHENATFMP
EENGYPVDAIRMVGLRKRPDEPLGLTVREDENGYLVIARIMAGGTIDRQGLLHVGDAICE
VNGVKIKNLQGLHEEVGKCRDSVTLKVIPALRDPPSSNQVTSSLHPDSTKTVCYMRALYS
YDPSEDSLLPTCPSQSPQDIGLKFEKGDILQIVDQSDPNWWQAQVVGTVNKRTGLIPSQE
LEERRKAFVRQEYDYVHKIGICGTRISKRKKKLMFSIKKSTDYDQAELIMYEEVARMPPF
MRKTLVLIGSHGVGRRTIKNQIIASDPSKFGTILPHTSRPMRELEEDGKAYHFTTREAME
ADIRHHRYLEYGELNGNLYGTKLDSILSIIRSGKMCVLDCSPASLKYLRNSSEMLPYVIF
LAAPGMDQIKSLYNIGSSMGSSNRNLTFDRSSSMRYSSRRARTLESLASLYEEDDFKRTM
EDSAKLQRAYDKYFDLIIVNNDLHETYGEIMDAIDRLATEPQWVPVTWVY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgtgttgctggagacggacaatgtgttgtatatgataatacaagacccggag
gaggcagacctcccgcctggccaacatgaggtacaagacacattagaagacggtgtggga
gtagtggaacctgtgtcctcgggcaacggaaagcttgtttctcagattcggctgctgtgt
gaaggatcaacgagcgctccctcacaagagcttgcagatctccttcatcggcctcacctg
ctggcacttttagaaacccatgatactatagctgatcatcgacatacaggagacgcaagt
acatcaagaaacggttataacggtgtaaacggttgccacgagaacgccacattcatgcca
gaggaaaatggctatccggtggatgccatcaggatggtgggccttcgaaaaagaccagat
gaaccccttgggctaacagtacgggaagatgaaaatggctacttggtcattgcaagaata
atggcaggtggtaccattgacagacaaggtctcttgcatgttggtgatgctatctgtgaa
gtcaatggagtaaagattaaaaatttacagggattgcacgaggaagtgggaaagtgtcga
gactcggtgacattgaaagtgataccagccctacgtgatccaccatccagtaaccaggta
accagcagcctccacccagattctacaaaaactgtttgttatatgagagcactctactcg
tatgatcccagtgaagactcgctccttccaacctgtccatcgcagtctccacaagacatt
ggccttaaatttgaaaaaggagatatattacagatagtagatcagtctgaccccaactgg
tggcaagcacaggttgtgggaacagttaacaagcggaccggcctcattccttcccaagaa
ttagaagaacggcgaaaggcttttgtcagacaagaatacgattatgtgcacaaaattggc
atttgtggtacaaggatatcaaaacgtaaaaagaaacttatgttttccataaagaaaagt
acagattatgatcaagcggagctgataatgtatgaagaagtggcccggatgccaccattc
atgcgcaagactcttgtgcttattggttctcatggcgttggcagaagaactattaaaaac
caaataattgcttcagatccatcaaaatttggaaccatattacctcatacttcaagacca
atgagagagttggaagaagatgggaaagcataccatttcactacccgggaagcaatggaa
gcagatatccgtcatcatcgctatttagaatatggcgagctcaatggcaacctttatggc
accaagctggattctattctttccataatcagatcgggaaagatgtgtgtactggattgt
tcacctgcttccttgaagtacctgcgtaattccagtgaaatgttaccatatgtaatattt
ctggcagcccctggtatggatcagatcaagagtttgtacaatattggtagttctatgggt
tcctcgaatcgtaaccttacctttgatcgcagcagctcgatgagatacagttcccgacgt
gccaggacattagagtctttggcttccctgtatgaggaagatgatttcaagcgcacaatg
gaggacagtgccaaactacagcgagcttatgataaatattttgacttaatcattgtgaat
aatgaccttcatgagacttacggtgaaatcatggatgccattgaccgccttgctactgag
ccccagtgggtgcctgtcacatgggtttattaa
DBGET
integrated database retrieval system
