Procambarus clarkii (red swamp crayfish): 123765077
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Entry
123765077 CDS
T07930
Name
(RefSeq) transcription factor SOX-2
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123765077
Transcription factors [BR:
pcla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123765077
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123765077
NCBI-ProteinID:
XP_045609466
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All DBs
Position
29:13884202..13894806
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AA seq
456 aa
AA seq
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MYPTMMESMPVSYASTMGGMMGHYFGGGSAGMGVGAGVGQIPPAHHSNAHAQQQQPPQQP
PPQQEGSHPHQQAPLTSHAPALSPQETLTTSHAHLRQAALVTPVPTPSPADSTASGCSPS
GSAQKKENGKDDHVKRPMNAFMVWSRMQRRKIAQENPKMHNSEISKRLGAEWKTLTEAEK
RPFIDEAKRLRAQHMKDHPDYKYRPRRKPKTLKKDGYPYSIPYPAVSMDPLRGGFPSQLS
PYYSASAAAANYGSITAAHMAAAAAAAAAAQQQLTTQVSQASPVGYGYDASKYTSYMSGS
SGYPMSMYGSAVGATDHKYGDTSKAAAAAAAVGGYEAAKSYLDSSKYLSDKYGLEKPTSY
MDKLAQEPKDTEMKSTSPGISSPHPGAMGGYSSAALSNYYSQAASTSAFQPSAAALSQGV
PSTMAGLLQPSQVATYTNAQYPPVGADYRRPLSVIF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccacaatgatggagtccatgccggtgtcttacgccagcacaatgggtggtatg
atggggcactatttcggtggaggcagcgctggcatgggtgtgggcgcaggcgtgggtcag
ataccccctgcgcatcacagtaatgcccatgcccagcagcagcagccgcctcagcagccc
ccgccacagcaggagggcagccacccccaccagcaggcacccctcacttcccacgcgccg
gccctcagccctcaggagactctgactacgagtcacgcccacctccgccaggcagccctg
gtgacgcccgtgcccacgccctctcccgccgattccacagcgtctggctgctcccccagc
gggtcagcccagaagaaggagaacggtaaagatgaccacgtgaagcgtcccatgaacgcc
ttcatggtgtggtctcgcatgcagcgccgcaagatagcgcaggagaaccccaagatgcac
aactccgagatctccaaacgccttggagccgagtggaagacgctgacggaggctgagaag
cgtcctttcatcgacgaagccaagcggctccgggcccagcacatgaaggatcaccccgac
tacaagtaccgcccccgcaggaagcccaagaccctgaagaaggacggctacccctacagc
attccctaccccgccgtctccatggatcccctccgaggaggtttcccgtcgcagctgtct
ccatactactccgccagcgccgctgcggccaactacgggtccatcactgcggcacacatg
gccgccgcagctgctgccgccgccgccgctcaacagcagttgactacccaggtctctcag
gccagccccgtcggctacggctacgatgcctcgaagtacaccagctacatgagcggctct
tcaggctaccccatgagcatgtacggatccgccgtcggagccacggaccacaagtacggc
gataccagcaaggccgcagcggccgcagccgccgttgggggctacgaagccgccaaatcc
tacttggacagcagcaagtatctctccgacaagtacggcctggagaaacccacttcgtat
atggataaactggcccaagagcccaaggacaccgagatgaagagcacgtcccctggaatc
agcagcccgcacccaggcgccatgggtgggtatagctcggccgctctcagcaactactac
agtcaggctgccagcacgtcagccttccagccctcagcagcagctctgagccaaggggtg
ccctccaccatggccggcctcctgcagccctcacaggtggccacctacaccaacgcgcag
tacccgcctgtgggagccgattataggaggccgctgtcagtaatcttctaa
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