Procambarus clarkii (red swamp crayfish): 123765509
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Entry
123765509 CDS
T07930
Name
(RefSeq) Y-box factor homolog isoform X1
KO
K09276
Y-box-binding protein 1
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123765509
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123765509
03041 Spliceosome [BR:
pcla03041
]
123765509
Transcription factors [BR:
pcla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
123765509
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
123765509
mRNA cycle factors
Common to processing body (P body) and stress granule
123765509
Spliceosome [BR:
pcla03041
]
Common components
Common spliceosomal components
General mRNP proteins
123765509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
Motif
Other DBs
NCBI-GeneID:
123765509
NCBI-ProteinID:
XP_045610094
LinkDB
All DBs
Position
30:complement(16365338..16381213)
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AA seq
356 aa
AA seq
DB search
MADPETQTQPEEQPKAPVKEKEVLATKVTGTVKWFNVKSGYGFINRHDTKEDVFVHQSAI
IKNNPRKYVRSVGDGEEVEFDVVVGEKGNEAANVTGPGGEAVKGSPFAHDRDVPLQGSPY
AADRRRGYRRRYYRRALPGDEGEMEEEGGDFPPPMRGRGRGGFRGRGPRRFYRGRFFGRG
RGRGAGRGGFYQSYNDYEGGEVSEGEGMQIRGRGRGRGRGRGRGGRGPRGYFRRYYGSPR
PQYGEMMATPDDAPRRRFRRGGRGRGRGGRYSGTPETRTSETQTQVAAEGQKPEASAEEA
KEIAEAEGEQHDAQTEVVGEGQQSGQENQAPPAAPAPATTSQPQQPVENTTAESSA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccggagacacaaacacagcctgaagaacaacccaaggcacctgttaaggaa
aaggaagtccttgccaccaaggtaaccggcactgttaaatggttcaacgtgaagagtggc
tatggcttcatcaaccggcatgacaccaaggaggatgtgtttgtccaccagtcagccatc
ataaaaaacaatccaaggaaatacgtgcggtcagtaggagacggcgaagaagtggagttt
gatgtcgtagttggcgagaaaggcaatgaagctgccaatgtcactggtcctgggggagag
gcagttaaggggtcgccttttgctcatgaccgtgatgttcccctgcaggggtcgccctac
gctgcagatcgtcgccgtggctaccgccgccgatactaccgccgtgcactaccaggcgat
gagggagagatggaggaggaggggggagattttccaccaccgatgaggggtcgtggccga
ggtggattccgtggccgtggacctcgtaggttctaccgtggtcgcttctttgggcgtgga
cgtggccgcggggcaggacgtggtggtttttatcaaagctacaatgactatgagggaggg
gaagtatctgaaggtgagggcatgcagattaggggacgtggaagaggccgcggacgtggc
aggggtaggggtggacgtggtccacgtggctacttccgccgctactatggtagccctcga
cctcaatatggagaaatgatggcaaccccagatgacgctccacgtcgcagattccgccgt
ggaggtagaggacgcgggcgtggcggcagatacagtggcacccctgaaacaaggacgtcg
gaaacgcagacacaggtagcagctgagggacagaagcctgaagcgtcagcagaagaagca
aaagaaattgctgaagctgagggagagcagcatgacgctcaaactgaagtagtgggagaa
ggtcaacagtcaggacaagaaaaccaggctcctcctgctgctcctgctcctgctactaca
tcacaacctcagcagccagtagaaaacacaactgctgaaagttctgcgtaa
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