Procambarus clarkii (red swamp crayfish): 123765542
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Entry
123765542 CDS
T07930
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04120
Ubiquitin mediated proteolysis
pcla04137
Mitophagy - animal
pcla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123765542
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
123765542
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123765542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123765542
Enzymes [BR:
pcla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123765542
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123765542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
CENP-B_N
HTH_23
Trm112p
DUF6115
HTH_28
HTH_7
Motif
Other DBs
NCBI-GeneID:
123765542
NCBI-ProteinID:
XP_045610151
LinkDB
All DBs
Position
30:complement(26044103..26076915)
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AA seq
372 aa
AA seq
DB search
MTVNKMPRSSSNQPEGGKKRQVTLSVKDKLKVIELCNLGRSAVSIAREFGIGASTVCDIR
RKKEQYMKYMATSDNVYPSEGDEENFLLGKETKLVTMSAFASKSGRAVHPQSAPSGAAPG
GNTELASLFECPVCFDYVLPPILQCQSGHLVCATCRPKLTCCPTCRGPLGNIRNLAMEKV
ASTVMFPCKYSSSGCSATLLHTDKTEHEDTCEFRPYMCPCPGASCKWQGSLEQVMPHLMS
AHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYDGHQQFFAIVQ
LIGSRKQAENFAYRLELNGPRRRLTWEATPRSIHEGVQSAIMNSDCLVFDTSIAQLFADN
GNLGINVTISMC
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgaacaagatgcctaggagcagcagtaatcaaccagaagggggtaagaagagg
caggttactctatcagttaaggacaagcttaaagtcattgaactgtgtaaccttggccgt
tctgctgtgagcatcgcgagagaatttggcataggggcaagtactgtttgtgatataagg
agaaaaaaagagcagtacatgaaatatatggctactagtgataatgtatacccatctgag
ggtgatgaagaaaattttctacttggtaaagagactaagctcgtgacaatgagtgcattt
gcaagtaaaagtgggagggcggtgcacccccagtcggctccgtcgggtgctgcaccagga
ggcaacacagaattagccagtttgtttgagtgtccagtatgttttgattatgtattgcca
ccaatcctacagtgccagagtggacatttagtatgtgccacttgtcgcccaaaactcaca
tgctgtccaacatgcagaggacctttaggaaatataagaaatttagcaatggagaaagtg
gcatccacagtcatgttcccttgcaaatattcctcctctggctgctcggcaaccctccta
cacacagacaaaacggaacatgaagacacatgcgagttccgtccatatatgtgtccatgt
ccaggtgcttcttgtaaatggcaaggatctttagaacaagttatgccacatctgatgagt
gcccacaagagtattaccacattacaaggtgaagacatagtgttcttggcaacagatata
aatttacctggagctgtagactgggtcatgatgcagagctgctttggtcaccattttatg
ctggtgttagaaaagcaggaaaagtatgatggccatcaacagttttttgccattgtacaa
ctgattggctcaagaaaacaggctgaaaactttgcgtacagattggagctgaatggaccc
cggcgaagactaacctgggaagccactccacgatcaatacatgaaggtgttcagtcagca
atcatgaactctgattgcctagtgtttgatacttccattgcccagttgtttgcagacaat
ggcaacctcggcattaatgtaacaatctccatgtgctga
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integrated database retrieval system
