Procambarus clarkii (red swamp crayfish): 123765595
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Entry
123765595 CDS
T07930
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123765595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123765595
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123765595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
123765595
NCBI-ProteinID:
XP_069189959
LinkDB
All DBs
Position
30:9065732..9148759
Genome browser
AA seq
2544 aa
AA seq
DB search
MAAASEGQEFFELVSTEEKTHIPDNVAKKLQDVWAAKLKEVTSLKIENEKLKLNSEQEKF
QLEKELVGIRGQLEEETRLKEAAKKQNENLKNSLFILEDEVQQAKSKITSLTREVEQSQN
EKEDVSSQSAAMAGNLESRAKQIQDLQEQVQKLTEQLSETTRAKCEAVIQAEEANSRELQ
LKYREKRLEQENGMLTRQIALFQHQLEQRTEESVNQRQEHSSIILGLQTDLNHKIEELHV
VKEEKEQLQKQVEDKCQRIKDLLETLNSSRESEVKLEETFRQELAAQKKLTDIYQASTQN
EKERASELENAVEELRKLLQEASDHYGALERAKTKGDEESAEALRQSNLLVKDLKEELDK
VNMLLEANAKRDHGGYDELSPAASAASQLVSRGLSLTQLYSEYLSVSEKLMATEEENKRL
KRYVDQILQEIEERVPVLKKQRDDHQKSLETITTLHAQLDDALGELEKQRSEADEARRRT
NYLDRENKRLDSQMKDLSKQVTILVSQVEAARAGLPPPSIPKDSSRSPSVAGDVISQRLV
GFRDINELQEQNRSLRTSLRELSEQMEASEHSAVDEKTKELKEELDAAKSQLKELSAARE
RQETMMENLVHQRDMYRTLLTQQTPKAGGKPTSPTPEPSGISQDEVKKLQESLEKSKKEV
NTLKREHEDYRAEKSKNDKMMQDEYENLRVNMDKIRNENIKLVSQAEYNDERMKTLQSNT
EVLQRQIASLEKNNSTLQGIIGRHEGTIETLRSEYMTLQKKLSRAEVSLENLREERTLLK
ETEARLVAERESLSRGQTSQAMVLANLESIKINLERRDSDGKMRYENRVAELTEQVSRLK
AKLTSNSDLRASEVKVKELEGRNRAMQSEHATVTKQLVDVKAELANTKKKMNELQERARA
LPSPGARARGSSPVGSMQFRTAGPSPQVRDLEVQLAEEKAKTTALQSALDQSKRFEKELI
ELNKQHEKQLSESNEACKTANEEYTKLQKELHETEEQLAKLENQLKDAIEEGETAKILLK
SKLAKTEDELQAHQKQLSDVQEALEKAKADEESAKKEAQEQSKLAAEVQDKYEREVMLHG
ADLKALATLKERQAEYNTELQEATSARLKAEEAVRDTRLGFEERENVMRRENKDLMARCH
ELEEQNKSILDQFTQLSDKMAAIQSKLTSSVGESGTAPFTEDEARSSDQLREVIKYLRRE
RDVASGKCEVAQAENQRLEAQRNVLKTQLDQVTKSLSEEREKNQVSADTAGRYAELLRKV
HTLDALADSNRLMREEKESLQSSCAEYKAKFETLEKQIEPLQEKQRLNINKIEALMVEKK
TLENEKEMFKKRTQELVEKLNRAKPEDFVKLQQEIVDQQKTLQSKEAEINRLKNQLAQLS
KNQQMIVSQKNQFQQQLNGVREELRKANEEAKKNLIEKSRIQQQYGDENKKTSAERARLQ
QQLLQSQERVRGLESASQQAQASHQQEMGNMIEAQRHQLEVTKREAENLAENLKELEVKY
AEAVKKADNYEKQSLQLRKIATKYKKAAEGGAAAASSTGGEGTDGEASSGTTVAANSEKI
KELEETIAALRQKEETVQQETVKLQQEITALKQSLTNKEAENNMVKSQTQQKDGEMGKLR
LELEGKTRELQVAQNLATQLKQNVSKQIADITKRLEESQNKKQMYENHISQLEKERDQLS
REVESLNKKLQMQQRQLENLQKQAAGVSKPSTSGVSSEKSGFEPPPTANIRPMNAPVTPS
ASPRSQTATQVVPPSRAIPTASIRPMAPPSGGSAPTQGSTVMVVSPLETHSDGMVSSTVT
LPQATVTPTPAISAPTLLTTATTSPSATTTMTTTLTATVSPTPASASLATPVAAAVAIPN
ITASQSSSQSSTASQSSVASQSTTVVVESTPATQSTATAQSIPTTKASGLQTAPATSSTV
ASQSTLANQSTSAPQTSVASTSVVAPIVSVTASATVATAPPPSKAPTVSAPLTRQQEPQE
VSADALVSQAIALVSPLSSQEIAGPSGISSQKRKLDSVEAVTNTKDAKRCCVDEDPLQSA
EEAGPSSSHAEQENDDTSQTADNEEDVILLESDDEHDEYPDQGDEDEEEDEEDEEEDEQM
DEEDQDQSIHAIDTDDDEDEEEEEDEDDDEAMEQDETTRECSQGLDTEPGQNTREAEEDL
GNAEAEAEAASQVSGDAEDSRGESQEAPSESERPQPSAGPSQPSSSSRGVDGPAHPSPRT
PLALPRSVTRQERLGSVGRQTLAPFNQLPQYEEGGDDSIVPSTPTLFVPRRGDGFSEAVS
SPQVPSGGFVFGSNPELSNPPQTSGLAQMAEGGLIDDTRIDLGQLDEGNRSQPSTPLHRS
PTADLGAEGGVSTSEGDTVHRETPTIRLTGAEQSNEENSKDSEENFTEADSMAAEVGEEV
EDEEEEDAEGEADDDVIDLEEEDEGEEAEADQQAGEAEERVGDESSSQPVQDVSSVPSST
PSSLPSSSQQRRITPITWDDSPQRIHRGRGFHTSRGGRGFQRNTNLAGRGFNINPMMHAP
SLLRGGPQRARRSRPGAFPRGSPM
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgtctgaagggcaggagttttttgaactcgtttctaccgaagaaaagact
catataccggataatgtagccaaaaaacttcaagatgtatgggcggcaaagcttaaggaa
gtcacaagcttaaagattgaaaatgagaagctaaaactcaactccgaacaagaaaaattt
cagcttgaaaaggagttggtaggcattcgaggtcaactggaagaggaaactcgtctgaag
gaggcagccaagaagcaaaatgaaaacttaaaaaacagtttatttattttagaagatgag
gtacaacaagcaaagtctaagataacatctctgacacgtgaggtggaacagtcacaaaat
gagaaagaagatgtatcctcacagtcagcagccatggcaggaaaccttgaatcccgggcc
aaacaaatacaagatcttcaggagcaagtacaaaaactaacggaacaactgagtgaaact
acccgagcgaagtgtgaggctgttatccaggcagaggaagcaaatagtcgtgaattgcag
ctaaaatacagagaaaagagactggaacaagagaatggtatgctgacacgtcagatagct
ttgttccagcatcagcttgaacagagaacggaagaaagcgtcaatcaacggcaagaacat
tctagcattattcttggccttcaaactgatcttaaccataaaattgaagagttgcatgtt
gtgaaagaagagaaagagcaactgcaaaaacaggtggaggataaatgtcaaagaataaag
gatttgctggagacgttgaattcatctcgagaatcagaagtgaaactcgaagaaacattt
aggcaagaattagctgcacaaaagaagctcactgatatatatcaagcatctacacagaat
gagaaagaacgagccagtgaactagagaatgctgttgaggagcttcgtaaactattgcag
gaagctagtgatcactatggggctcttgagcgtgcaaaaaccaagggtgatgaggaaagt
gctgaagctctgcgtcagtctaatttattagtaaaggatctgaaggaagaattagacaaa
gttaatatgctactggaggctaatgccaagagagatcatggaggttatgatgaactatca
cccgcggcaagtgcggctagtcagctagtgagtcgtggcttgagcctcacacagctgtac
tcagagtacctttctgtttctgagaagcttatggctactgaggaagaaaacaagcgactc
aagcgctatgttgaccaaatcttacaggaaattgaagaacgagttccagtgttaaaaaag
cagcgtgatgaccatcagaaatcgctagaaacaatcaccacacttcatgctcagcttgat
gatgcacttggggaattagagaaacagagatcagaagctgatgaagcacggagaagaaca
aactatcttgatagagaaaataagcgacttgatagccagatgaaggatcttagcaaacaa
gtgaccattctagtttcccaagttgaagcagccagagctggtcttcctccacctagcatt
ccaaaggatagttccaggagcccatcagttgctggagatgtcatttcccaacgcttagta
ggcttcagagatattaatgaattgcaggagcaaaatagaagtttacgtacctcactaaga
gaattatcagagcagatggaggcgtctgaacattctgctgtagatgaaaaaacaaaagag
cttaaggaggaacttgatgctgccaaatcacagttaaaggaactttcagccgctcgagaa
cgacaggaaacaatgatggaaaatcttgtacatcaacgggatatgtaccgcacgcttttg
acacagcagacgccaaaagctggaggtaagcctacaagtccaactccagaaccatctgga
atatcacaagatgaagtgaagaagcttcaggaaagtttagaaaagtcaaagaaagaagta
aatacattgaaaagggagcatgaagattaccgggcagaaaagtccaagaatgataagatg
atgcaagatgaatatgaaaatcttagggtcaatatggataaaataaggaatgaaaatatc
aagttggtttcccaggctgaatataatgatgagaggatgaagacactacagagtaataca
gaggtattacagcggcaaattgcatctctggagaaaaataattctactttgcaaggcatc
ataggtcgccatgaaggtacaatagagacacttcgtagtgaatacatgactctgcaaaag
aaactgtcacgtgctgaagttagtttagaaaatcttcgagaggaaagaactttgctcaag
gaaacagaagcaaggcttgtagctgagcgggagtctcttagccgaggacaaacatctcag
gcgatggttcttgccaatctggaaagtattaagattaacctagaacgtagagactctgat
gggaagatgagatatgaaaaccgtgttgcggaattgactgagcaggttagccgcctcaag
gccaagttgacatcaaattctgatctaagagcatcagaagtgaaagtaaaagaattggag
ggacgcaatcgtgctatgcaaagtgaacatgcaaccgtcaccaagcagttggtggatgta
aaagcagagttagcaaacaccaaaaagaaaatgaatgagcttcaagagagggcaagagct
ttaccatctcctggagccagggctagaggtagcagccctgtgggatctatgcagttccgc
acggcaggcccttcaccacaagtgcgtgaccttgaggtacagcttgctgaggaaaaggcc
aagacaacagcacttcaatctgcccttgaccaatccaagcgttttgagaaggaattgata
gaacttaacaaacagcatgaaaagcaattatcagagtcaaatgaagcttgcaagacagct
aatgaagaatacacaaaattgcagaaggaacttcatgaaacagaagaacagctagcaaaa
ttggaaaaccaattgaaggatgcaatagaagagggtgaaactgccaagattcttttgaaa
tccaaactagccaaaacagaagatgaactgcaggcacatcagaaacaactaagtgatgtt
caagaagctcttgagaaagctaaagcagatgaagaaagtgccaagaaagaggctcaagaa
cagtccaaattggcagctgaagtacaggacaagtatgagagggaagtgatgcttcatggt
gctgatctcaaagctttagcaactttgaaagaaaggcaggcagagtacaacactgagctc
caagaggctacctcagccaggctaaaggcagaagaagctgttcgggatactcgcttaggc
tttgaagagcgggaaaatgtcatgcgtcgagaaaataaggatctcatggcaaggtgtcat
gaactggaggaacaaaataagtctatccttgatcaatttactcaactgtctgataaaatg
gctgcaattcaaagcaaacttacatcatctgtgggtgaaagtggcactgcacccttcact
gaggacgaagcccgttcctctgatcagcttcgagaagttatcaaatatcttcgacgggaa
cgggatgttgcttctggaaagtgtgaagtggcacaagctgagaatcagagattggaggct
cagagaaatgtcctcaagacccagttggaccaggtaaccaagagtctctctgaagaacgt
gaaaagaatcaggtttcagcagatactgcagggcgctatgcagaactccttcgcaaagtt
cacactctggatgctcttgctgatagtaaccgtcttatgcgtgaagaaaaggaaagcttg
caaagttcttgtgcagaatataaagccaaatttgaaacacttgaaaaacaaattgagcct
ctccaagaaaaacagaggttaaatatcaacaagattgaagctctcatggtggagaagaaa
acactggagaatgaaaaggagatgtttaagaagaggacgcaggagcttgtggagaaacta
aatcgggctaaaccagaagactttgttaagcttcagcaagagatagtagatcaacagaaa
accctacaaagcaaagaagcagaaatcaatagactgaaaaatcagctagcccagctgtcc
aagaaccagcaaatgattgtgagtcagaagaaccagttccagcagcaattgaatggagtt
agggaggaactccgtaaggctaatgaagaagccaagaagaacctaatagagaagagtcgt
atacaacaacaatatggagacgagaataaaaaaacttcagccgaaagagcccgtcttcaa
cagcaactgctacagtcccaggagcgtgttagggggttggagtcggcatcacagcaggcc
caggctagccaccaacaagagatgggcaatatgatagaagctcaaagacatcagttagaa
gtaacaaaaagagaagcagaaaatcttgcagaaaatttgaaggaattggaggttaaatat
gcagaggcagttaaaaaggctgacaactacgaaaagcagtcattgcagctccgcaagata
gccactaaatacaagaaggctgctgaaggtggtgctgcagctgcaagtagcactggaggt
gagggtactgatggcgaggccagcagtggcactacagttgctgcaaactcagaaaaaata
aaagaattagaggaaaccattgctgcacttcgtcaaaaggaagagacggttcaacaggaa
actgtcaagttgcagcaggagattaccgcattaaagcagtccctaacaaacaaggaagcg
gagaataatatggtaaagtcacagacccagcagaaggatggagaaatgggaaagcttcgt
cttgagcttgagggaaagacaagggagctacaggttgcacaaaacctagccacccagctg
aagcagaatgtttccaaacaaattgcagacatcaccaagagattagaggagagccagaat
aagaagcaaatgtatgagaatcatattagtcagcttgagaaggagcgtgaccaattgtct
cgagaagtggagtctcttaacaagaagctacaaatgcagcaaagacagctggaaaatctt
caaaagcaggcagctggggtatccaagccatctacaagtggtgtgtcatctgaaaagagt
ggttttgagcctccacccactgcaaatattaggcctatgaatgcaccagtgactccttca
gcttcacctcgatcacagacagctacacaagttgttcctccatctcgagctatcccaact
gctagtattcgccctatggctcctccatctggaggctctgcaccaactcagggttctact
gtaatggtagtatctccattggagactcacagtgatggcatggtgtcctcaactgtgact
cttccacaggctacagtgacacccacacctgccatatctgctccaacacttctgactact
gccaccacatcaccctcagctacaaccacaatgaccactaccctaactgcaactgtttct
cctacaccagcttcagcttcccttgctacacctgtggcagcagcagttgctattccaaat
attacagcttcacagtcatcctcacaatcttctactgcaagtcaatcatcagttgcttca
caatctacaacagtggtagttgagtctacccctgctactcagtctacagcaactgcacag
tctattccaacaacaaaagcatccggcttgcagactgccccagctacttcctctactgtg
gcgtctcagtccactctggccaatcagtcaacctcagcaccacaaacatcagtagctagt
acatctgttgttgcaccaattgtttcagtaactgctagtgcaactgtagccactgcacca
cctccatctaaagcaccgacagtttcagcacctcttacaagacaacaagagccacaagaa
gtatcagctgatgctttggtatctcaagctattgctcttgtaagtccacttagttctcaa
gaaattgctgggccttctggtataagttcacaaaaaagaaagcttgactctgtagaagct
gttactaatactaaagatgcaaaacgttgttgtgtggatgaagatcctcttcagtctgct
gaagaagctggaccatcatcatctcatgcagagcaagaaaatgacgatacaagccaaaca
gctgataatgaagaagatgtcatccttttagaatcggatgatgaacatgatgagtatcct
gaccagggtgatgaagatgaagaggaggatgaggaagatgaagaggaggatgagcaaatg
gatgaggaggatcaagatcaaagtattcatgctattgatacagatgatgatgaggatgag
gaagaggaagaggatgaagatgatgacgaagccatggagcaagatgaaacaaccagagaa
tgcagtcaaggtcttgacacagaaccaggccagaatacaagagaagccgaagaagattta
gggaatgctgaagcagaagctgaagctgcatctcaagtgtcaggggatgctgaagattcc
cgtggggaatcacaagaagctccaagtgaaagtgagcgaccccagccatctgcaggacca
agtcaaccatcttcatctagtcggggggttgatggtcctgctcatcccagtccacgtacg
cctcttgctctcccacgttctgttacccgacaagagcgattgggttcagtgggccgccaa
actttagcacccttcaatcaattaccgcaatatgaagaaggtggtgatgacagtatagtg
ccatcaacacctactttgtttgttccaaggcgtggagatggattctcagaagctgttagc
tccccacaagttccctctggtggatttgtgtttgggtccaaccctgaattatccaatcca
ccgcagacaagtggtttagcgcaaatggcagagggtggccttattgatgatactcgtata
gaccttggacagttggatgaaggcaacagatcacagcctagcacacctcttcaccgatcc
ccaacagctgacttaggtgcagaggggggtgtgagcactagtgaaggggacacggtacac
cgtgaaaccccaacaataaggttgacaggagccgagcagtccaacgaagagaactccaag
gactcggaggaaaactttactgaggctgactccatggctgcagaggttggagaagaagta
gaagatgaagaggaagaggatgctgagggagaagctgatgatgatgtgattgatttggag
gaagaggatgaaggagaagaagcagaagctgaccaacaagcaggtgaagcagaggaaaga
gttggtgatgaaagtagcagccaaccagttcaagatgtttccagtgtaccttcttccaca
ccaagttctttaccatcctcatcacagcagcgtagaattacacccattacttgggatgat
tcacctcagagaattcaccggggtcgtggctttcatacgagccgtggaggaaggggattt
cagcgaaacacaaacctagctggaagagggtttaatattaatcctatgatgcatgcacca
tctctactgcgtggaggtccccaacgtgctagaaggtcccgcccaggagcttttccgcgg
ggctctcccatgtaa
DBGET
integrated database retrieval system
