Procambarus clarkii (red swamp crayfish): 123765833
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Entry
123765833 CDS
T07930
Symbol
LSm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123765833 (LSm7)
09123 Folding, sorting and degradation
03018 RNA degradation
123765833 (LSm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123765833 (LSm7)
03041 Spliceosome [BR:
pcla03041
]
123765833 (LSm7)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123765833 (LSm7)
mRNA degradation factors
5'-3' decay
Lsm complex
123765833 (LSm7)
Spliceosome [BR:
pcla03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123765833 (LSm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123765833
NCBI-ProteinID:
XP_045610580
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All DBs
Position
37:complement(24455415..24458991)
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AA seq
122 aa
AA seq
DB search
MASQQAAGGERREGGGGGRDGEQKDKKRKESILDLSKYLDKAIRVKFSGGREASGILKGF
DQLLNLVLDNTIEYLRDPDDPYKLTEDTKERGLVVCRGTAVVLICPMDGCEAIANPFVQQ
ET
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcagcaagcagctggtggagagcgacgagaaggaggaggaggaggcagagat
ggggaacagaaagacaagaaacgaaaggaatctattcttgatttaagcaagtacttagac
aaggccataagagtcaagttttctggtgggcgtgaagcttctggaatattgaaaggcttt
gatcagctattaaatcttgtgcttgacaacaccattgaatatctccgagatccagatgat
ccatacaaactaacggaagatacgaaagagagaggcttggttgtgtgtcgtgggacagcc
gttgtgcttatttgtccaatggatggatgtgaagcaattgcaaatccctttgtacaacaa
gagacatag
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