Procambarus clarkii (red swamp crayfish): 123765882
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Entry
123765882 CDS
T07930
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcla04121
]
123765882
Enzymes [BR:
pcla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123765882
Ubiquitin system [BR:
pcla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123765882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Sina_RING
TRAF3_RING
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
123765882
NCBI-ProteinID:
XP_045610680
LinkDB
All DBs
Position
37:26936619..26961143
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AA seq
420 aa
AA seq
DB search
MVEKERVQCRKCRKVLLFKDEFCLLDAHSQEYHDTVGNMSGESGSCCPSVMEHNCLYLSE
ESFPAFILTAVNESSWTKGKINCPSCQARLGSFNFVSGSQCACGSHVLPQVHILRSKVDW
MKIGEALPRPVSFPDRAVALSSVTLPFEVNSSMCTYEDAASVEAVATRPSGENINSGCSP
AQQTALKTNFNDLSGKSSKPRNRTGKSETSRKSRQQIRHEQHVSEDEIEVRQSSNRVTAD
IVSKSISDEVNTEKEEKEESIPESLVCPVCLDVLYSPLVVQPCGHKFCEPCLRRLAQPNP
TYTHCPLCRQIIGECMPCPELATEVRENFSELYEQRRQFEKNHNSQHLPLPWDKNYRWRQ
IHHDGRSWVDRAGGWSTVIGMGSLYILGIGIWLYLVVSGKIMFDTFPHSVTKSMSRNFVM
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggttgagaaagaacgagtgcaatgcaggaagtgccgcaaagtgctcctctttaaggat
gaattttgtcttcttgatgcccatagccaggagtaccatgatactgtgggaaatatgagt
ggggagtctggaagctgttgcccatcagtgatggaacacaactgcctgtatttatcagag
gaatctttcccagccttcatattgacagctgtaaacgaaagttcttggactaaggggaaa
ataaactgcccaagttgtcaggctcgtcttggatcattcaactttgtgtctggcagtcag
tgtgcctgtggctctcatgttctcccacaggttcatatacttagatctaaggtcgattgg
atgaaaataggtgaagcattgcctcgtcctgtgtcatttcctgatcgtgctgttgctcta
tcttctgtcacattaccctttgaggtgaactcatccatgtgtacttacgaagatgctgcc
agtgttgaagctgttgctacccgtccttctggagaaaacatcaacagtggttgctctcca
gctcagcaaactgccttgaaaacaaactttaatgatttaagtggtaaatcttctaaacca
agaaacaggacaggtaaaagtgaaacatcaaggaaatcaagacagcaaataagacatgaa
caacatgtgtctgaagatgaaattgaagtaagacagtcgagtaacagagttacagccgat
atagtgtcaaagtctatatctgatgaagtaaatacagagaaggaagaaaaggaggagtca
attcctgaaagtcttgtgtgccctgtgtgtctggatgtgctgtacagtccactggttgta
caaccttgtgggcacaaattctgcgagccttgtctacgccgcttagctcaaccaaaccct
acatatacacactgtcctctttgcagacagataattggcgaatgtatgccttgtccagaa
ttggcaaccgaggtacgtgaaaatttctctgaattgtatgaacagcgacgtcagtttgag
aaaaatcacaacagccaacacctgccactgccttgggacaaaaattacaggtggaggcag
attcatcatgatggccgcagttgggttgacagagctggaggttggagtacagtaatagga
atgggttcattatatatcctgggtattggaatctggttataccttgttgtttctggaaaa
ataatgtttgatacatttcctcactcagtcactaaatcaatgagtcgcaattttgtaatg
tag
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