Procambarus clarkii (red swamp crayfish): 123765883
Help
Entry
123765883 CDS
T07930
Symbol
RpL40
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03010
Ribosome
pcla04120
Ubiquitin mediated proteolysis
pcla04137
Mitophagy - animal
pcla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
123765883 (RpL40)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123765883 (RpL40)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123765883 (RpL40)
04137 Mitophagy - animal
123765883 (RpL40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pcla03011
]
123765883 (RpL40)
04121 Ubiquitin system [BR:
pcla04121
]
123765883 (RpL40)
Ribosome [BR:
pcla03011
]
Ribosomal proteins
Eukaryotes
Large subunit
123765883 (RpL40)
Archaea
123765883 (RpL40)
Ubiquitin system [BR:
pcla04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
123765883 (RpL40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
123765883
NCBI-ProteinID:
XP_045610685
LinkDB
All DBs
Position
37:26897202..26907428
Genome browser
AA seq
129 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGVIEPSLKLLAEKYNCNKMICRKCYARLHPRATNCRKKKCGHTSN
IRPKKKIKG
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttgtgaaaaccctaacgggtaaaaccatcaccctagaggtggaaccttca
gataccattgaaaatgtgaaggcaaagatccaagacaaggaaggtatccctcctgaccaa
cagcgactcatctttgctggaaagcaactggaagatggacgcactctgtcagattataac
attcaaaaagagtccacacttcacctggttctgcgtctacgtggtggtgtcattgaacct
tcattgaagcttctagcagagaagtacaactgcaacaagatgatctgccgtaaatgttat
gcacgtctccatccaagagccacgaactgtcgcaagaagaagtgtgggcacacctccaat
atccgacccaagaagaagatcaagggttaa
DBGET
integrated database retrieval system
