Procambarus clarkii (red swamp crayfish): 123766259
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Entry
123766259 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger homeobox protein 3
KO
K09378
zinc finger homeobox protein 3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123766259
Transcription factors [BR:
pcla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
123766259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf-C2H2
zf-C2H2_ZFHX3
zf-C2H2_4
zf-met
zf-H2C2_5
MerR_1
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
123766259
NCBI-ProteinID:
XP_045611283
LinkDB
All DBs
Position
9:7831768..7898489
Genome browser
AA seq
3076 aa
AA seq
DB search
MPGEERGEPPLKGCPPAPPHPPADPLDTPNHPQEQQHVPPEMSPEDAPSTSPLAGEEGPG
PLPQQGPNATSSSSSAAPSASPPATFNLTCMTCHTHFTSAEQYTRHHCVASSAAQDAINE
SSSDVEKFDGKIVYNPDGSAYIIDSEMSDDEGVAGLELPRHEGSIVDSPRHPLSSTAAPT
IPTIANAIYVTKNPAFYTALYGQTFSSLIQENKVPEVPIVHNYRVFTVGDKDSETECKDS
DSKNSSSEKTKLPLLDYSQVPIKPILMCFVCKLSFGYVRSFIAHAMGDHSVVLLDEERDL
LAAKNASAIIQCAGREKEPRVSFLEPVTPPGAGSSSSSSSSNNCSSSTQHGGALATLLPS
GAPSGTSPSPQPSPARATHNNDAHHDFIDDERTNAVKREMPDFYELVRQQHQQQQQQQQQ
QQQHLHHHHQQQLQQQKQQRSDPFATPQHPAAARTPDLSRKSPISALGANGRASVSPVTS
MSPTSFSPLQSPVAQLTGTIIGACPEHMNGRPQGVNCEKCDLILQQSRQLGGQMAFMHSR
NSCKTLKCPKCNWHYKYQETLEIHMKEKHPENESTCIYCLTNQAHPRLARGETYTCGYKP
YRCEVCNYSTTTKGNLSIHMQSDKHLNNMQELQNGGMPTMDGSMGSQSLTSQQQSPSGSI
YSAPKTPTPSTTPAPTQQQQKPKPVWRCDVCNYETNVARNLRIHMTSEKHTHNMMVLQQN
VKHMQQLSALQGGGGGGGQLDPMALLQYAGNPAAAAMMASLGVGEKPHLPEAALADLAYN
QALLIQMMSGGQLPGGHMGPGGPPGHGGHLGPGGPPGHSDHPGPHFDLGLNPESLEPPPE
PVPPNPRHAFTCCVCSVFSTDSLEQLTLHLQLDRSKINENEVLLVVAGNYICKLCSYKTN
LKANFQLHCKTDKHLQKLQHVNHILEGGPRNEWKLKYLSNTNPMHVRCNLCEYYTNSVHK
LQLHAAHQRHEVLNVLFRHLCVAEHTIMDDRRLYTCTLCNFTTRAKLQMLHHIRSMRHLQ
MEQLHQIQRHAEGKGGTQQDIGDIFRVEEAEEEGGRHSPPEEPKEEAGRSPDHVHACPFC
HFTCESESTLQHHVDGDHGGEKKAGMRCPLCEEACPDMSALEKHAINIHSVNSDGLQRLL
LLVRLSAAAAGKGDDDDDHHPNQSEQHHRLQEHLQHRHPPKLDDNQSSGGAGKRGDERGV
GREQEECGVCGLACASIEDLVAHQATAGHTPITETPRGPGYLCWKKGCNQYFHAAQALHS
HFREVHGAVPRPSVAVSERHVYKYRCQQCSLAFKTVEKLHLHAQYHAIRDATKCLLCHRN
FRSLTALQKHVSSDHPELTALERHQFQASIVGAPVGAGAGPVLDPNTTALLRRESNKGDE
LEEVTRVVDEPQLPPQQQAIEDYLNSDTMALDNYSDPARRFKCHRCRVGFTRQSYLTAHQ
KTLLHRRGEKLTYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKKAMQDK
ETKGTPSNTQTQSELITIEGRSTPLGDGQAGPLRGSMLGAGEEEERNKPYRCHVCRVAYS
QQSTLDIHLRSVLHQTRASRLPEYSPAAHLDSLRPLVDHLPTPTTPQPSPAPHHDAHTPR
SPSNSQGTPPGLHHQGISPSGSIGSGGQGSCGRCGGVWNTAEQGAQHAVLCGLLPPHLAF
LPHAGSSLSPSATLDAAWASLCVASHLPPTQPHDRSLSPSECSIESLSTSRFTVPFRKSS
RLHKHLLESFGFDLVIHHVENQQISPSKDPEEGASEDAKDKSISNLPELSKSKCPQCYKQ
FSSVWVLKAHLEEIHESGVPFDYLKKFSDEYRKEYNTSRHCSSSDPSALTDEERGRDAEI
VQGGDKGTSDEREKEAESGSRSDAAATPTSRATPTPGITPTSTSACSISPAADHQGMNVP
PQMAEMAAALNALTAAQMQQMQFNPMMMAGLGLAAGIPLQLNPLAAMNLHPPLAPMLPPH
MFDHMALASMQQQGPPTSGPSGLQGDHSVFIKQQQQQLLQQQQQQQAAAAAAAAAAAAQQ
KRARTRITDEQLKILRGHFDINNSPTEDQINEMAKQSGLPPKVIKHWFRNTLFKERQRSK
DSPYNFSIPPSTTLNLEEYEKTGEAKVMPLNPEEAREIVAISNAREEERVAERIPKEQEE
PAPERAAAMSPLNKVPSLNQDNSRVQEKSGDGLGGSGGLNSQQQLQQHQSREQQHQQQLL
EQQQQQREQQSQPLLPPHHQQQVSSGPQLVSSASSSPLGLPATSSFTSLASPQSSMSLTS
LITSQLETNPMLAHKLPHTPPTVPSSGLIPPSSGVSPTPPHLSFPSTPLSAPHTPTSSCS
STGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLNLSPRVIVVWFQNARQKAR
KVYENQPPIDPNDEGAGRFTRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSA
QAQAAAAQAAALYNDENSNHSSVTDSSQQSGGLDCKSSEGTFQCDKCSLIFNRFEQWREH
QIVHLMNPALFLNKGADSPFTSIQQQQQQSQPPQQPQQAPTSIPQPQPSPLLPPASPLKR
KADESEDERESMIGASEAQRDKRLRTTILPEQLDYLYQKYQMEANPSRKMLETIAQEVGL
KKRVVQVWFQNTRARERKGQFRAHAQVINKKCPFCPAIFKVKSALESHLSTKHAEHYSKG
DVDIDALPDVEDSGVGNFGLSSTPSATQASQVMPSSLFSSEVPEDSIAMYHEEAIRRYLN
DVNLSSDGTRREGESPLDLSKPLDIVRPLGFDSSILDNTNEQLDDHSDEESYHLDMCEHD
EGDTGLNSHESNPTSPASSTTSSAKQSGFMHGAPNKRFRTQMSATQVKIMKSVFQDYKTP
TMAECELLGREIGLAKRVVQVWFQNARAKEKKAKLALQKVLGTEPEGPKPPEECKVCNFK
YSHKYSIQDHLFTRSHIENMKVFLEKVKEESDAASLNSSLSSMSVDVDRPPSSMTPAAGL
AHQLQMAQLMALGSPPSAAGATAGEEKKGGPGGSSNTDDLSRLQLLQQMYQQMGLGGLQG
APHPLLQHAMMAGAGE
NT seq
9231 nt
NT seq
+upstream
nt +downstream
nt
atgcccggagaggagcggggagagccgcctctgaagggatgccccccggcccccccacac
ccccctgctgaccctctcgacacccccaaccacccccaggaacagcaacacgtccccccg
gaaatgagtcccgaggacgctccctctacctcccccttggcgggcgaggagggcccaggg
cccctcccccagcaaggacccaatgccacctcgtcgtcgtcgtcggcggcaccatcagcg
tcgccgcccgcgacgttcaacctgacgtgcatgacgtgccacacccacttcacgtcggcg
gagcagtacacgcgccaccactgcgtggcctcctccgccgcccaggacgccattaacgag
tcgtccagcgacgtggagaagttcgacggcaagatcgtgtacaaccccgacgggtcggcc
tacatcatcgactcagagatgagcgacgacgagggcgtggcgggtctggagttgccgcgg
cacgaggggtccattgtggactccccgcgccacccgctctcctccaccgccgcccccacc
atccccaccatcgctaacgccatatacgtcactaagaaccccgccttctataccgctctt
tacggtcaaaccttcagctcgctaatccaggaaaacaaagttcctgaagtccccattgtt
cacaactacagggtctttaccgttggtgataaggacagtgaaactgagtgtaaagacagt
gatagcaaaaatagttccagtgagaaaacaaaacttccattattagactactcgcaagtt
ccaattaaacctatattgatgtgttttgtatgtaagttgtcttttggatatgttagatct
tttattgcccatgcgatgggcgaccatagtgtagtcttactggatgaggagagagacctc
ctggcggccaagaacgcctcggccatcatccagtgcgcgggtcgggagaaggagccgcga
gtgtcgttcctagagccagtgacgcccccaggtgccggcagcagcagcagcagcagtagc
agcaacaactgcagcagcagcacccagcacgggggcgcgctggccaccctgctgccctcc
ggggcccccagcggcacctcccccagcccgcaaccctcacccgcaagggccacgcataac
aacgacgcccaccacgactttatagatgatgaacgtaccaatgcagtcaaacgtgaaatg
cctgacttttacgaacttgtccgtcagcagcaccagcaacaacagcagcagcagcaacag
cagcagcagcatcttcatcaccaccaccagcagcagctccagcagcagaagcaacagcgg
tctgaccccttcgctacccctcagcacccagctgctgctcggacgccggacctgagccgc
aagtcgcccatctctgcgctcggagccaacggtcgggcttctgtttccccggtgacttcg
atgtcaccgacgagcttctcgccgttgcagtcccccgttgcgcagctgacgggtaccata
atcggcgcatgtcccgagcacatgaacggtcggcctcagggagttaattgcgagaagtgt
gacctcattctgcaacaatcacgccagctgggcgggcagatggctttcatgcattctcgc
aattcctgcaagacgctcaagtgtcccaagtgcaactggcactacaaataccaggagacg
ctcgagatccacatgaaggagaagcatccggagaacgagtctacttgtatctactgcctc
actaatcaggcgcacccgcgtctcgctcgaggagagacctacacctgcggctacaaaccc
taccgctgtgaggtgtgcaactactccactaccaccaaaggcaacctctcaattcacatg
cagagcgacaagcatctaaacaacatgcaggagctgcagaatggaggcatgcctaccatg
gacggctcgatgggctcgcagtcgttaacatctcaacaacagagcccatccggcagtatt
tactccgcgcccaaaacccccacgccgtccaccacgccggcacccacgcagcagcagcag
aagcccaaacctgtgtggcgctgcgatgtctgcaactatgagaccaatgttgcacgcaac
cttcgcatccacatgactagcgagaagcacacccacaacatgatggtgttgcagcagaat
gtaaagcacatgcaacagctgagtgctttgcaaggaggcggagggggcgggggccagttg
gaccccatggctctgttgcagtatgccggtaaccctgccgccgccgccatgatggcaagc
ttaggcgtgggagagaaacctcacctgccagaggcagctttagcagatctcgcctacaac
caagcgctgcttatccagatgatgtccggtggccagttacctggcggccatatgggtcct
gggggccctccgggacacggcgggcacttgggtcctgggggccctccaggacatagtgat
cacccgggcccacacttcgacttgggtcttaatcctgagtcactggagccgccgccagag
cctgtgccgcccaacccgcgtcacgccttcacctgctgcgtctgctctgtcttctccacc
gactccctggagcagctcactctccacttgcagctggaccgctccaagatcaacgaaaac
gaggtcttgctggtagtagcgggtaattacatctgcaagctgtgttcgtacaagaccaac
ctcaaagctaacttccagctgcactgtaagacggacaaacatctccagaagctgcagcac
gtcaaccacatcctggaaggcgggccccgcaacgaatggaagctcaagtacctgtccaat
accaacccgatgcacgtgcggtgtaacctgtgcgagtactacaccaatagcgtccacaag
ctacagttgcacgccgcccaccagaggcacgaggtcctcaacgttctcttccgccacctg
tgtgtggcggagcacactattatggacgaccggcgcctctacacctgcaccctctgtaac
tttaccacccgcgccaagctacagatgctgcaccacatccgttccatgcgtcacctgcag
atggagcagcttcaccaaatccagcggcacgccgagggcaagggcggcacccagcaggac
atcggcgacatcttcagagttgaagaagctgaagaagaaggaggacgtcactctccgccc
gaggagcccaaagaggaagcgggtcggtccccggaccacgtgcacgcgtgccccttctgc
cacttcacctgcgagtcggagtcgacgttgcagcatcacgtggatggtgaccatggcggg
gagaagaaggcgggtatgaggtgtccgctgtgcgaggaggcgtgtcccgacatgtccgcg
ctggagaagcacgccatcaatatccactccgttaactctgacggcctccagcggctcttg
ctgcttgttagactcagtgctgctgctgctggtaaaggcgatgatgacgacgaccatcac
ccaaaccagagtgaacagcatcatcggttgcaggaacacctccagcatcggcacccgccg
aagctggatgataaccagtcatcaggtggtgcaggtaagcgaggtgatgagcggggcgtg
ggccgggagcaggaggagtgtggcgtatgtgggctggcctgtgcctccatcgaggacctg
gtggctcaccaggcaactgcgggccacacaccaatcactgagacccctcgtggcccgggc
tacctgtgctggaagaagggctgcaaccagtacttccatgcagcccaggcgctgcacagt
cacttccgggaggttcacggcgctgtccccagaccctcagtggccgtgtctgagcgccac
gtgtacaaataccgctgccagcagtgctcactggcatttaagactgttgagaagctgcac
ttgcatgctcagtaccatgctattcgagacgctaccaagtgtctgctgtgccaccggaat
ttccgttccctgactgcactgcagaagcatgtaagctcagatcaccccgagctgacggcc
ttggaacgtcaccagttccaagcgtccatcgtcggagcaccggtgggggctggggcgggg
cctgtcctcgaccccaacaccacagccctgctccgtcgggagtcgaacaagggggacgag
ttggaagaggtgacaagagtagtggatgagccacagctcccgccccaacaacaggccatt
gaggactacctcaactcagacacgatggctctggataactacagtgacccggccagacgc
ttcaagtgtcaccggtgccgagtaggcttcaccaggcagagttacctcaccgctcaccaa
aagactctgctccaccgtcggggtgagaagctaacttacccaatggaaaaatatctcgac
cccaacagaccctataaatgcgacgtctgtaaggagtcgtttacgcagaagaatattctg
cttgtacattataattcagtcagtcatttgcacaagcttaaaaaagctatgcaagataag
gagaccaaaggtactccaagtaatactcagacccagtctgaactgattaccattgagggc
agaagcactcctctgggggacggccaagccggtcccctgcggggtagcatgctcggggcg
ggggaggaggaggagcgtaacaagccctaccggtgtcacgtgtgccgggtagcgtactcc
cagcagtccactctagacatccacctccgctccgtactccaccagacacgagcctcccgc
ctcccggagtacagtccagccgcccaccttgactccttgcgcccactagtcgaccactta
cccacacccactaccccgcagccctccccagccccacatcacgacgcccacactcctcgc
tccccttctaactcccagggcacccctccagggttgcaccaccaaggcatctccccctcc
ggtagtattggtagcggcggccagggaagctgcggacggtgcggcggcgtgtggaacaca
gcagagcaaggggcgcagcacgcagtgctgtgtggtcttctaccacctcacctcgcattc
cttcctcacgccggcagcagtttgagtccgtcagccaccctggacgccgcatgggcctcc
ctctgcgtcgcctcccacctgcccccgactcagccccacgaccgctctctctctccatct
gaatgttccatagaatctctctctacctctagattcactgtacctttcagaaagtcttca
cgccttcacaagcacctattagaaagctttggctttgatctagttatacatcatgttgaa
aatcaacaaattagtccttcaaaagaccctgaggaaggggcttctgaggacgctaaagac
aaatccatttctaatttgcctgaactaagtaaatctaaatgtcctcaatgttataaacaa
ttttctagtgtatgggttttaaaagcccacttagaagaaattcatgagtcaggtgtacct
tttgattaccttaagaaattctcagatgagtaccgtaaagagtacaatactagtcggcac
tgctctagcagcgatccctctgctcttacagatgaggagcgaggccgggacgcggagatc
gtccaggggggagacaaggggacttcagatgagagagagaaagaggcagagtcaggcagc
aggagcgacgccgcggccacgcccacctctcgtgccacgcctactcccggcatcacgccc
acctccacctccgcctgctccatctcccccgcagccgatcaccagggtatgaatgtgccg
ccgcagatggcagagatggcagctgcacttaatgccctgactgcagcccagatgcaacag
atgcagttcaatcccatgatgatggcaggattgggtttggcggcaggtataccactgcaa
ctcaaccctttggctgccatgaacctccacccacctttggcgcccatgctgcctccacac
atgtttgatcacatggccctagccagtatgcagcagcagggaccacctacttcagggcct
tcaggcctccaaggtgatcattcagtattcatcaagcaacagcagcagcagcttcttcag
cagcagcaacaacaacaagctgcagctgcagcagcggccgctgccgcagctgctcagcaa
aaaagagctcgaacacgaatcactgatgaacaacttaaaatccttagaggtcatttcgac
attaacaactctcccaccgaggaccagatcaacgagatggccaagcagagtgggctgcct
cctaaagtgattaagcattggtttcgcaacacgctgtttaaagaacgacaacgtagcaaa
gattcgccgtataactttagcatcccgccgtccaccacacttaacctagaggagtatgaa
aagacaggtgaggccaaggtgatgccgctcaacccagaggaggcgcgcgagattgtggcg
atcagcaacgcccgggaggaagagagagttgcagaacgcatcccaaaggagcaggaagag
ccagcccctgaacgcgccgccgccatgtctccgctcaacaaagttcctagtcttaaccaa
gacaatagccgagtacaagaaaagagcggggacggcttaggtggatcaggtggcctgaat
agtcagcaacaactccagcaacatcagtcacgggaacaacaacatcaacaacaactgttg
gaacaacaacaacaacaacgggagcagcagtcacaaccattgcttcctccacatcaccaa
caacaagtaagcagtggtccccaactggtgtcgtcagcgtcgtcgtcccctctggggctg
ccggcaacctcatcgttcacctccctggcctcacctcagtcatcaatgtcactcacctca
ctcattacctcccagcttgagaccaaccccatgctggctcacaagctgcctcacacacca
cccacagttcctagttctggccttattcctccaagctcaggtgtgagtcccacgccgccc
catttgtccttcccatcaactccactctctgcccctcacacccctacctcttcctgctcc
agcacgggcaagcgagccaaccgcacccgcttcactgactaccagattaaggtgctacaa
gagttctttgagaacaacgcctaccctaaggacgatgatctggagtatttatccaagctg
ctcaacctatcaccacgtgtcattgtggtgtggtttcagaacgcccgacaaaaggcacgc
aaagtgtacgagaaccagccacccattgacccaaacgacgaaggcgcgggcaggttcacg
cggacgccgggcctcaattaccagtgtaagaagtgcttgcttgtcttccagcggtactat
gagctcatccgacaccagaagacacattgctttaaggaagaagatgccaagcgctcagct
caagcgcaagcagctgcagcccaagcagcagctctgtacaatgacgagaactccaaccac
tccagtgtcactgattcgtcacagcagtctggaggactagactgcaagtccagtgagggt
acttttcagtgtgataagtgcagtctgatatttaataggtttgaacagtggcgggaacac
caaattgttcaccttatgaaccctgcactctttttaaacaagggtgctgattctcccttt
accagcatacagcagcagcaacagcagtctcaacctccacagcagccacaacaggcgccc
acatccatacctcagccccagcccagccccctcttgccccctgcctcgcctctgaagcgt
aaagctgacgagagtgaggatgagagagagagcatgatcggggccagtgaggcccagagg
gacaaacggctccgcaccaccatccttccggagcagctggactacctataccagaagtac
cagatggaggccaacccgtcgcggaagatgctcgagaccattgctcaggaagtgggtctc
aagaagagggtcgtccaagtctggttccagaatacacgagcgcgagaacggaaaggtcag
tttagagctcatgcacaagtgattaacaaaaaatgtcccttctgtcctgctatctttaaa
gtcaagtctgctcttgagtcgcacctttccactaagcacgcggagcattactctaaggga
gatgtggacattgatgcactacctgatgtagaagactctggtgttgggaacttcggcctg
tcttcaactccttctgcaactcaagcttctcaagtgatgccctcttctctcttctcctca
gaagttccggaagactcgatagccatgtaccacgaggaggcaatccggcggtacctgaac
gatgtcaacttgtcatcagatggtacccgacgagaaggtgagagtccccttgatctcagt
aaacccttagacattgtgcggccgttggggtttgactcatctatactggacaacaccaac
gagcagctggacgaccactctgacgaggagagctaccacctggacatgtgcgagcacgac
gagggcgacaccggcttgaactctcacgagagcaacccgacctcgcccgcctcctccacc
accagctccgccaaacagtccgggttcatgcatggggctcccaacaaacggttccgcacc
caaatgtcggcaacgcaggtcaaaatcatgaaaagtgtgtttcaggattataagacgcct
acaatggcggagtgtgagttgctggggagggagatagggctagccaagcgtgtggtgcag
gtgtggttccaaaacgcgcgggcaaaggaaaaaaaggcgaaattggctctgcaaaaagtg
cttggtactgagccagagggtcctaaaccacctgaggagtgcaaagtgtgtaactttaag
tacagtcataagtactctattcaggaccacttgtttacgcgctcacatatcgaaaacatg
aaagtattcctggaaaaggtgaaggaagagagtgatgcggcaagcctaaattctagcctg
agctcgatgtctgtggacgtcgatcggccgccctcctcgatgacgcccgcggccggcctg
gcgcatcagttgcaaatggcgcagctgatggcgcttgggtcaccaccatctgccgccggt
gccaccgctggtgaagaaaagaagggtggccctggtgggagcagcaacaccgacgacctg
agtcgcctgcagctcctgcagcagatgtatcagcagatgggtctcggggggctgcagggg
gcgccgcacccactccttcagcacgccatgatggccggcgccggtgagtag
DBGET
integrated database retrieval system
