Procambarus clarkii (red swamp crayfish): 123766409
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Entry
123766409 CDS
T07930
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123766409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123766409
03009 Ribosome biogenesis [BR:
pcla03009
]
123766409
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123766409
Spliceosome [BR:
pcla03041
]
Complex A
U1 snRNP components
U1 related factors
123766409
Complex B
123766409
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
Pre-60S particles
Helicases
123766409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123766409
NCBI-ProteinID:
XP_045611438
LinkDB
All DBs
Position
62:complement(15814820..15841083)
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AA seq
641 aa
AA seq
DB search
MSSYRNRRSRSRSRSRSRDRDRRRGRDDWGSRGGWNAAGGGRQSLKGRQPGERLRKPKWD
LSRLTPFEKNFYQPTPTVLNRPPYEVEKYRNEKEITLRGKNIPNPIQYFSDYNFPDYVMA
EIKRQGYEQPTPIQGQGWPISLQGRDFVGIAKTGSGKTLGYILPAIVHINNQPYLERGDG
PIALILAPTRELAQQILTVAQDYGASSKIRSTCVFGGAPKGPQIRDLERGVEICIATPGR
LIDFLEAGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR
NLAEDFLKDYIQLNVGSLSLAANHNILQIVDVCQEMEKDTKLRQLLEEIMAEKESKIIVF
AETKRKVDDLTRRMRREGWPAMCIHGDKSQQERDWVLSEFRSGRAPILVATDVAARGLDV
DDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFLTADNGKQAKDLIEVLKEANQVV
NPRLYEIMDMGRGFGKGRNRWRGRDDDRRGFGRDRDRGRVGGGGGGGGGRNGYSNGNSYG
TSEGLGRFNQFRGGGNSSAVSNGVGTGQTRLNGPPPLMGPGSMKASTRQATTQNQFNGPQ
RPPVQKAGATTFNQPASGAGAVGGLGIMGAMPSALNWPRLP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatacagaaatcgcaggtctcgctcccgttctcgttctcgctcgcgtgaccgt
gatcgtcgacgtggtagggatgactggggttcacgtggtgggtggaatgcagctggtggt
ggacggcagtcactgaaaggaaggcagccaggcgagcgccttcggaagccaaagtgggac
ctgtccagactgactccctttgagaagaacttctatcaacctacaccgacagtactaaat
cgtccaccttatgaagttgaaaaatataggaatgagaaagaaattactcttcgtggtaag
aacatcccaaatcccatccagtactttagtgattataatttcccggactatgttatggca
gagatcaaaagacagggctatgaacaaccaacaccaattcaaggtcaaggatggcctatt
tcactgcagggaagggactttgttggtattgccaagactggttctggcaaaacgttagga
tacatcctgccagcaattgtgcatataaacaaccaaccatatttggagcgaggcgatggt
ccgattgcactcatcctagcccccaccagagaacttgcccagcagatactaacagttgca
caggactatggggcatcctcaaagatccggtccacatgtgtatttggaggtgcacccaag
ggaccacaaattcgtgatcttgaaagaggggttgagatttgtattgctacccctggacgt
cttattgacttccttgaagctggaaaaacaaatctgcggcgcacaacatatttagtatta
gatgaggctgaccgcatgctggacatgggtttcgagccacagataaggaaaattgtagac
cagattcggccggataggcaaacactcatgtggtcggcaacttggccaaaggaggtgagg
aatctagcggaggacttcttgaaagattacatacagctgaatgttggatcactttcccta
gctgccaaccataatatcctccaaattgttgatgtttgtcaagaaatggaaaaggatacc
aaactccggcaactacttgaagaaatcatggcagaaaaggaaagcaagatcatcgtgttt
gctgaaacaaaaagaaaagtcgacgatttgaccaggcgaatgagacgcgaagggtggcca
gcaatgtgtattcatggagataaatctcaacaggaaagagactgggttctaagtgaattt
cggtctggaagagctccaattttggtagccacagatgttgctgcacgagggctagatgtg
gatgatgtcaagttcgtgatcaactatgactacccgtcatgctctgaagattatgtccat
cgcattgggcgaactggcaggtcagacaagactggtactgcatacacgttcttaacagcg
gacaatggcaaacaggctaaagatctgatagaagtgctaaaggaggcaaatcaagtggta
aacccacggctttatgagatcatggacatgggacgtgggtttggcaaaggacgtaatcgt
tggaggggccgtgatgatgacagaagaggttttgggcgtgatcgtgatcgtggccgtgtg
ggtggtggtggtggtggtggaggaggaaggaacggctacagcaatggaaacagctatggt
acgtctgaagggcttggaagatttaaccagtttagaggcggaggcaatagcagtgctgtg
tccaatggggtgggtacaggccaaaccagactgaatggtcctcctccgctcatgggtcct
gggtctatgaaggcttcaacccgccaagcaactacacagaaccagtttaatggaccccaa
cgtccacctgtccagaaagccggagctaccacgttcaaccaacctgcctctggagctggt
gctgttggtggcctaggcataatgggggccatgcctagtgccctgaactggccgcggctg
ccctag
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