Procambarus clarkii (red swamp crayfish): 123766410
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Entry
123766410 CDS
T07930
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123766410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123766410
03009 Ribosome biogenesis [BR:
pcla03009
]
123766410
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123766410
Spliceosome [BR:
pcla03041
]
Complex A
U1 snRNP components
U1 related factors
123766410
Complex B
123766410
Ribosome biogenesis [BR:
pcla03009
]
Eukaryotic type
Pre-60S particles
Helicases
123766410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123766410
NCBI-ProteinID:
XP_045611443
LinkDB
All DBs
Position
62:complement(15739022..15773308)
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AA seq
654 aa
AA seq
DB search
MSSYRNRRSVLVFSQYLRNGLNRSLQTWSRSRSRSRSCDRRRDRDDWGSRGGWSSAGGGR
PSLKGRQPGERLRKPRWDLSRLTPFEKNFYHPTPTVLNRPAYEVEKYRNEKEITLRGKNI
PNPIQYFSDYNFPDYVMAEIRRLGYEQPTPVQGQGWPIALQGRDFVGIAQTGSGKTLGYI
LPAIVHINNQPYLERGDGPISLILAPTRELAQQILTVAQDYGASSKIRSTCVFGGAPKGP
QIRDLERGVEICIATPGRLIDFLEANKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI
RPDRQTLMWSATWPKEVRNLAEDFLKDYIQLNVGSLSLAANHNILQIVDVCQEMEKDTKL
QQLLEEIMAEKESKIIVFADTKRKVDDLTRRMRREGWPAMCIHGDKSQQERDWVLSEFRS
GRAPILVATDVAARGLDVDDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFFTADN
CKQAKDLIEVLKEANQVVNPRLYEIMDMARGGGGKGRNRWRGRDDDRRGFGRDRDRDRVS
GGGRNGYSNGNGYGTSEGLGRLNQFRGGGNSSAVPNGVGAGRTHLNGPPPLMGSGSVKPS
MSQAANQNQFNGPQRPPVQNVGTNMSVGMFNQAATAGGLGIMGAMPSAMNWPRQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatacagaaatcgcaggagcgtgttggttttctctcagtatctaagaaatggt
cttaacagatctcttcaaacttggtctcgctcccgttctcgttctcgctcgtgtgatcgt
cgacgtgacagggatgactggggttcacgtggaggatggagttctgctggtggtggacga
ccatcgttgaaaggaaggcagccaggtgagcgtcttcggaaaccgagatgggacctttcc
agactgactccctttgagaaaaacttctatcaccctacacctacagtactcaatcgccca
gcttatgaagttgaaaaatataggaatgagaaggaaattacactacgtggcaagaacatc
ccaaaccccatccagtactttagcgattataattttccggactatgttatggcagaaatc
agaagactaggctatgaacaaccaacaccagttcaaggtcaagggtggcctattgcactt
cagggaagggactttgttggtattgcccagactggttctggcaaaacgttaggatacatc
ctgccagcaattgtgcatataaacaaccaaccatatttggagcgaggcgatggtccaatt
tcactcatcctagcccccaccagagaacttgcccagcagatactaacagttgcacaggac
tatggggcatcctcaaagatccggtccacatgtgtatttggaggtgcacccaagggacca
caaattcgtgatcttgaaagaggggttgagatttgtattgcaacaccagggcgtcttatt
gacttccttgaagcaaacaagacaaacctacggcgtacaacatacttggtactagacgag
gctgaccgcatgctggacatgggttttgagccgcagatcagaaaaatagtagatcagatt
cgaccggataggcaaacactcatgtggtcggcaacttggccaaaggaggtgaggaatcta
gcggaggacttcttgaaagattacatacagctgaatgttggatcactttccctagctgcc
aaccataatatcctccaaattgttgatgtttgtcaagaaatggaaaaggataccaaactc
cagcaactacttgaagaaatcatggcagaaaaggaaagcaagatcatcgtgtttgctgat
acaaaaagaaaagtcgacgatttgaccaggcgaatgagacgcgaagggtggccagcaatg
tgtatccatggagataaatctcaacaggaaagggactgggttttaagtgaatttcggtct
ggaagagctccaattttggtagccacagatgttgctgcacgagggctagatgtggatgat
gtcaagttcgtgatcaactatgactacccgtcatgctctgaagattatgtccatcgcatt
ggtcgaactggcaggtcagacaagactggtactgcatacactttcttcacagcagacaac
tgcaagcaggctaaagatctaatagaagtgctgaaagaggcaaatcaagtagtaaaccca
cgtctttatgaaatcatggatatggcaagaggtggtggtggcaaaggacgtaatcgttgg
aggggccgtgatgatgacaggagaggttttggacgcgaccgtgatcgcgatcgagttagt
ggtggtggaaggaacggctacagcaatggaaatggctatggtacgtctgaagggcttgga
agacttaaccagtttagaggtggaggcaatagcagtgctgtgcccaatggggtgggtgca
ggccgaacgcatctgaatggtcctcctccactaatgggttctggttctgtgaagccttca
atgagccaagcggctaaccagaaccagtttaatggcccccaacgtccacccgtccagaat
gtgggaaccaacatgtccgtgggcatgtttaaccaggctgccactgctggtggcttaggc
attatgggggccatgcctagtgcaatgaactggccacgtcagtga
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