Procambarus clarkii (red swamp crayfish): 123766459
Help
Entry
123766459 CDS
T07930
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123766459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123766459
Enzymes [BR:
pcla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123766459
Spliceosome [BR:
pcla03041
]
Complex C
Other components
Step II factors
123766459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
GIPC1_GH2
DEAD
AAA_22
PWI
nSTAND3
AAA_19
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
123766459
NCBI-ProteinID:
XP_045611534
LinkDB
All DBs
Position
62:16989148..17005497
Genome browser
AA seq
1314 aa
AA seq
DB search
MEDLSKLERLSLVSKICVELENHLGINDKDVAEFIISLAEKSKRLDKFKKELEENGGDQF
ADSFVESLWRLIQHMMPSLTAISCNDNIKEEINKPSTEKDKKRALLPFLALPNDPKVIHM
LDNELKPEIKMKEEVPEVDTSKDKEKDWEKRKEKRKKRDKDCEKDREKPDKKVKREPERE
VDDLMAFLESHAPSKQNEVSRSRSRSRDKKRRSRSRDRKRNCSDSKEKEKCDREQKKSRS
QERHKNRRDRSHSRERERRHRSQSREKERRHRSQSRERERRNRSHSRDRDRKANDYERDN
NRERHYDRKDRERRERSRSRGRDKHSRHSRSKSREKDLNRNRMGNREVFINRPPDENPVV
GKVYEGKVTNILNFGCFVQLEGLRRRLEGLVHISQLRQEGRVTNVSDVVMRGQKVKVKVL
SFTGQKTSLSMKDVDQGTGEDLNPNVAPLGSNSQEEDAMRNPDRPMSLMELTKGTDEEDL
ATYKRVNRISSPERWELKQMMAASCISKSEMPDFDEEQGVMGGEDDDEEDVEIELVEEEP
AFLRGYGRVREELSPVRIMKNPDGSLAQAAMMQSALAKERREIKMAQRESEMDSQPSNLG
QNWNDPLPETQRNDPAMSRGLPTQQQEVPEWKRHITGGTRGSYGKKTNMSLLEQRQSLPI
YKLRDQLIKAIDDNQILIVVGETGSGKTTQMTQYLAEAGFTAKGKIGCTQPRRVAAMSVA
KRVSEEFGCRLGQEVGYTIRFEDCTSSETVIKYMTDGMLLRECLIDPDMSCYACIMLDEA
HERTIHTDVLFGLLKQAVDKRPELKLIVTSATLDAVKFSEYFNQAPIFTIPGRTFPVEIL
YTREPETDYLDAALITVMQIHLAEPPGDVLVFLTGQEEIDTACELLYERMKALGSDVPEL
IILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNP
KTGMDSLMVTPVSQAGAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTSVPEIQRTNLAA
TVLQLKAMGINDLLGFDFMDPPPTDAMVMALETLHSLSALDDEGLLTRLGRRMAEFPLDP
NLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKEKQALADQKKAKFNQAEGDHLTLLA
VYNSWKNNKFSNAWCYENFVQMRTLKRAQDVRKQLLGIMDRHKLDVVSCGKNVARAQKAI
CSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVVYHELVQTTKEYMREVTT
IDPKWLVEFAPSFFKQGDPTKLSKYKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggaagacctttctaaactcgaaagactctcgctggtttccaagatctgcgttgaatta
gaaaaccacttggggataaacgacaaggatgtggcggaattcatcatttctcttgctgag
aaaagtaaacgtcttgacaagttcaagaaggaactggaggagaatggaggtgaccagttt
gcggactcatttgttgaaagcctgtggcgactgatccagcacatgatgccttccctaaca
gcaatttcatgtaatgataatataaaagaagaaataaacaagccttcaactgagaaagac
aagaaaagagcactactgcctttcttagctttgccaaatgatccaaaggttattcatatg
ctggataatgaacttaaacctgaaataaaaatgaaagaagaggttcctgaagtagacaca
agcaaagataaagagaaggactgggagaaaaggaaggagaaaaggaagaaaagggacaaa
gattgtgaaaaagatagagaaaagccagacaaaaaagtgaaaagggaacctgaaagagag
gtagatgatctcatggcctttctagagtctcatgctccatcgaagcaaaatgaagtgtca
agaagcagaagtaggagcagagacaaaaagaggaggtcaaggtccagagacagaaagaga
aattgtagtgacagcaaagagaaagaaaaatgcgatagagaacaaaaaaaatcaagaagt
caagaaaggcataaaaatcgaagagatcgaagtcacagccgagaaagagagagaagacat
cgcagtcagagcagggagaaagagagaagacatcgcagtcagagtagggagagagagaga
agaaatcgtagtcatagtcgagatagggacagaaaagctaacgattatgaaagagacaat
aatcgagagaggcactatgacaggaaggatcgagagagaagagaacggagtaggtctcga
ggccgagataaacacagcaggcacagcaggagcaagagtcgggaaaaagatctaaatagg
aatcgaatgggcaatagggaggtgtttatcaatcgtcctcctgatgaaaatcctgtagtt
ggtaaggtatatgagggtaaagtaacaaacatcttgaactttggctgctttgtgcagcta
gaaggcctacggcgccggcttgagggtctcgtacatatttcacagctgcgacaggagggt
cgtgttactaacgtgtctgatgtcgttatgcggggacaaaaagtcaaggtcaaggtgttg
tcgtttaccggtcagaagacgtcactgtctatgaaggatgttgaccaggggacgggtgaa
gacctcaaccccaatgttgctcctcttggtagtaacagccaggaagaagatgctatgagg
aacccagatagacccatgtccctcatggaactgactaaaggtaccgatgaagaagatcta
gcgacatacaagcgagttaaccgaatttcttcacccgagagatgggaactgaaacagatg
atggctgccagctgcatcagtaaatcagaaatgccagactttgatgaggagcagggagtg
atgggtggtgaagatgatgatgaagaagatgtggagattgaacttgtagaagaagaacct
gcgttcttacggggttatggcagggtgagggaagaactgagtccagtacgaatcatgaag
aaccccgatggctcactagctcaagcagcaatgatgcaaagtgctcttgcgaaagagcgt
agagaaataaagatggctcagagagagagtgaaatggattctcagccatctaatcttggc
caaaattggaatgatcctctacctgaaactcagcgcaacgacccagccatgtcgcgtggg
ttgcccacccagcagcaggaagtgccagaatggaagagacacattacaggtggaactaga
ggctcatatggaaagaaaaccaatatgtcacttttagaacaacgacaaagtctacctatt
tataaactacgagaccagcttatcaaggccattgatgacaaccagatcctcattgttgtt
ggtgaaacaggctctggcaagacaacacagatgactcagtacctcgcagaggcaggtttt
actgctaaaggaaaaattggatgcacccagccaagaagagtggcagccatgtcagttgct
aagagagtctctgaagaatttgggtgtagactgggacaggaagttggttataccattcgt
tttgaggattgcacaagctcagagacagttatcaaatacatgactgatggtatgttacta
agagaatgccttattgacccagatatgtcatgctatgcttgcatcatgttggatgaagct
catgaaaggactattcatacagatgttttgtttggtcttttgaagcaagcggtggataaa
agacctgaacttaaacttatagtcacctcggccaccttagatgctgttaagttctcggag
tacttcaaccaagccccaatcttcacaattcctggtagaacattcccggtagaaatatta
tacacaagggaaccagaaacagattatcttgatgcagctcttataactgtaatgcagatt
catcttgctgaaccgccaggagatgtacttgtctttctcactggtcaagaggagattgac
actgcgtgtgaacttttgtacgaacgcatgaaagcccttggaagcgatgtaccagagctt
attattttacctgtatattcagcattgccctctgaaatgcaaacaagaatatttgaacca
gcaccaccaggatcacgaaaggttgtaattgccaccaacattgctgagacatctctcacg
attgatggcatctattatgtggtagatccaggttttgtaaaacaaaaagtatacaacccc
aagactggtatggactcactgatggtcacaccagtttcccaggctggagctaagcagcga
gcaggtcgtgctggacggacaggccctggaaaaacctatagactttacactgaacgtgct
tacagagatgaaatgttgccaacaagtgtaccagagattcagcggaccaatctagctgca
actgtactgcagttaaaagcaatggggatcaatgacctgctgggttttgactttatggat
cctccaccaacagatgccatggtcatggctctcgagactcttcactctcttagtgcattg
gatgacgagggtttgctaacccgactgggtagaagaatggctgaatttcctcttgatccc
aacctttcaaagatgctgattatgtcagtacacttacagtgttcagatgaaatcctcaca
attgtttccatgttatctgtgcaaaatgtattttatcgacctaaagaaaaacaagcttta
gctgaccagaagaaagccaaattcaaccaagctgagggagatcatcttacacttcttgca
gtgtacaactcttggaaaaacaacaaattctccaatgcttggtgctatgaaaactttgtt
cagatgcgtacactcaaaagagctcaagatgttagaaagcaattacttggtattatggac
agacataaactggatgttgtgtcatgtggcaagaacgtggctagagcccagaaagcaatt
tgctccgggttctttcgaaatgcagcaaagaaggatcctcaggagggctacagaacactt
gtagactcccaggtagtctatattcacccttcgtcagccctctttaatagacaaccagaa
tgggtagtgtatcatgaactggtgcagacaacgaaggagtacatgcgtgaggtaacaaca
atagatcccaagtggttggtagagtttgccccatccttctttaagcaaggcgatccaacc
aagctcagcaagtacaagaagaaccagagacttgagcccttgtataataagtatgaagaa
cccaatgcttggagaatatccagagttaggaggaggaggaactga
DBGET
integrated database retrieval system
