Procambarus clarkii (red swamp crayfish): 123766537
Help
Entry
123766537 CDS
T07930
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123766537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcla02000
]
123766537
Transporters [BR:
pcla02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
123766537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
LD_SV2
Pentapeptide_4
MFS_1_like
Pentapeptide_3
MFS_3
DUF1129
Motif
Other DBs
NCBI-GeneID:
123766537
NCBI-ProteinID:
XP_045611722
LinkDB
All DBs
Position
62:complement(24864520..24926445)
Genome browser
AA seq
668 aa
AA seq
DB search
MSGGGDGLESASLVRHGSGGGRSYMSESGMLREGDGGHSGGGTGGGGGGGGRSKGNATEG
SLEGADELDFVESDAPLLSQFHEDAIQQAGTGPFQRLLLLVAGLSLAADTIELLVVAYVI
PSAEVELCMSGTQKGWLAAITFIGMMIGAMIWGSLSDNVGRRRALLSALFVNALFGIMTA
FMPTYGIFMTTRLCSGIGIGGGIPIVFAYYCEFVTQAERGRHLSWLLVFWAIGGVFTALM
AWIIIPRTGITVVLDEEHHFSSWRVFLVVCSLPSFGAVVGLYFMPESPRFLLEKGREVEA
MMVYKKIFKWNNAHNPGAEYQLTELELPSGTNRPPRHTPPQGVGKNFVSDISYGLEQFWG
LFFQLFLPPYLTTTLLLLIVWLTCSFGFYGLSVWFPEYIKLLKSEEYNSHANVTSDEVYE
HRSFNSTTLDNIQFVQTIFNNVTFSKTLINHVLFLNCSITDCLFSDVRSSKTFFKYSHIA
RNTFIDTDIYDYRFQDCEMINNKFHALAPGCTLDFDYNIHYKAVFQENLIGQLTMIPGTL
ITSLLMDKLGRVRIMSVSMALSSISAFFIWFLDSKIGVIVFEAVFNFIFISGWNALDIAS
TEAFPTHIRTTAYGFLSAASRIAGVLGSLCFGQFIYSSRAIPMLATSAVLMIGAIVSLKL
QETKDNLL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggaggggacgggttggagtcggcgtccctggtgcgtcacggcagtggtggc
gggcggagctacatgtctgaaagtggcatgctgagggagggtgacggaggtcacagtggt
ggtggaactggaggaggaggaggtggaggaggaagaagtaaaggtaatgctacagagggc
agtttagaaggagcagatgaactggactttgtcgagagtgatgcgccacttctttcccag
ttccacgaggatgccattcagcaggctggaacagggccattccagcgccttctcttgctg
gtcgcaggtctgagtcttgctgccgacaccattgagttgcttgtagtggcctacgttatc
ccttcagcagaggttgagctctgcatgtctggcacccaaaaaggctggctcgcggcaatt
acattcattggaatgatgattggtgcaatgatatggggaagtttaagtgacaacgtgggt
cgtcgtcgagctctactctctgctctcttcgtcaatgctctatttgggataatgacagcc
tttatgcccacctatggcatctttatgactacgagactttgctctgggattgggattggt
ggtgggatccccattgtgtttgcttactactgtgagtttgttactcaggcagaacgagga
cgtcatttgtcttggttgttggtgttctgggcaattggtggagtgttcactgcactgatg
gcctggataattataccgagaacaggtattacagttgttttggatgaagagcatcacttc
agctcctggcgtgtgtttcttgtcgtatgttccttgccatcatttggggcagtagttggt
ctgtatttcatgccagagtcccctcggttcttgctggagaaaggacgggaagtagaggct
atgatggtttacaagaaaatcttcaaatggaacaatgctcataatcctggagcagagtac
caactgacagagctggagttgccatctggtactaatcgccctcctcgacacactccaccc
cagggagttgggaagaactttgtgtctgatatttcctatggtctagagcagttttggggc
ctcttcttccagctgttcctaccaccttacttgacgaccactctcttgctgctgattgtg
tggttaacatgttcatttgggttctatggtctgtcagtttggttcccagaatacatcaag
ttgctgaagagtgaggaatacaacagccatgccaatgttacctcagatgaggtgtatgag
catcgttcattcaacagcactactctggacaatatccaatttgtgcagacaatcttcaac
aacgttacttttagtaaaactctcatcaatcacgttctttttctcaactgttcaataact
gactgcctcttctctgatgtcagaagcagcaagacattttttaagtattcccacatagct
cgcaacactttcatcgataccgacatatatgactatcgtttccaggactgtgaaatgata
aacaacaaattccatgcacttgcacctggctgtactttagattttgattataacatccat
tataaggcagtgtttcaagagaatttgatagggcaactgacaatgatccctggcacattg
atcacatccctcctcatggataagcttggcagagtcaggattatgagtgtgtccatggca
ttgtcatcaatatcagcattcttcatatggtttcttgacagtaaaattggtgtaattgtg
tttgaagctgtatttaattttatttttatatctggttggaatgcccttgatattgcgtca
actgaagcttttcccactcatatcaggactacagcatatggtttccttagcgctgcatca
cgaattgctggagttttggggtcactgtgttttggtcagtttatttactctagtcgggca
attcctatgctcgctacttccgcagtcctaatgattggggctattgtctcccttaaactc
caagagaccaaagataatcttttataa
DBGET
integrated database retrieval system
