Procambarus clarkii (red swamp crayfish): 123766566
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Entry
123766566 CDS
T07930
Symbol
cic
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcla03000
]
123766566 (cic)
Transcription factors [BR:
pcla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123766566 (cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
123766566
NCBI-ProteinID:
XP_045611775
LinkDB
All DBs
Position
62:complement(26362631..26452055)
Genome browser
AA seq
2802 aa
AA seq
DB search
MTGTMNRRGGNRAKRTAESKASGSSGRGARATARREGDSAVHQPPSGHTASGNNISHGKK
GEEDYGSVRAHKDAVSGGKGDDPGGSAEGIPTAGANDEAIVVSSQSSTGSSMPAATVSRP
RVGVANSSRGSAPAAGTGSLTSLTPVREEKQPVHDVCKLPKKRKFDPSELEDMNEGLQPA
TAMVTASTTVSSALVVSTSGQLRGPSVSTSVTSPMVSVAPMAVPDAIIRPIVVAEVDVNF
SEIKPQDLRVNTSGGGRVNENGSGIQSSNGKEGNGQDKIAPSEPPVESQPVNMKNTSHTV
VSHAIATHSVVTSQVLTVQRNSLSQPNTQLKLAPATQASSIPHTATVSTHIGLIPQHQTT
LVTIPQYQGSLNSSQQVQLHHHQQQQHQQRQKIQQQQQQQQQQHHQQRQQHIQHQQPHQQ
PHQQPHQQLHQQPHQQSHQQPHQQPHQQPHQQPHQQPHQQSHQQPHQQPHQQPHQQPHQQ
PHQQPHQQPHQQPHQQPHQQPHQQPHQQPHQQPHQQPHQQPHQQLHHHQQHLQQSHQTHH
QIHQQSHHQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQLQLQQQQQQMLQQHAVHIQQPHQQQHLTQPSQQSQLQHQVGSVGHHSVHIPHM
VPPQAHSQPAISQSATSCLSQSPSSKVEFPQPKQYAGFKSVVDAAAQATLSSHHVSGETR
EGGEVPRTPEMWSSQQGVARAPVDLSEWKGHRVLAKRGLVYYPAVIVSVKNACDLIVRID
ADANSDLLYSNVFTTGKFDVISDAVPSAKQLVEGARVVVRLDKEQLMFAEGVVYERQGSP
TSQYLVRISGETNNQGSGVANDHWLLRPHLRLLQPPWWEDLEPHVQSSLLAVSHHYNSQK
PSGYPPPGFQETSGSHLVPTAPSYSMVATTYGTITPPNHVTPPGSVPMTPLSGQSGSAGL
SSGSEELRRRPIDDYDSDDDLRREDITFPADGGHYSGNHRSMSLTPGALGSKYTGDPKRS
SMHSRGSTSSLIEQGSIGTTTPRSTPVTPRSGTATPLKYKKGEVVTTPNGIRKKFNGKQW
RRLCGKEGCSKESQRQGYCSRHLSMYGKRLRSSSITFSAGKDTPSVEGNWEEMSCDSDTS
PNFPLTAPRSQDETEAANMLMTLHNSSRSTTPAGCFSPTSISPRGIQSPVTVGPKGNVFM
PISQPAPITSPTGRAWMSHDNSNRHPVPSLPQRPIIRPELLRPVTKLPSTVSQVTGSTSV
IRASPSHTVPMGQSPGSSASLSINNPQVTLSPAGPSVHLHQAPESVIQDRREHLTLNPRV
TTINSQLINVSQQGHLSRSLGGPGVTITSGASQPTIAILEKVLTSSVPNTAKDDPNSQPE
DLSSRFRPIDQSGFCSDRSDLTDGKSDFDIKQRVSVSCGEQEGLLLRANNASVRDSGLHI
SEQSSHNLDTAKQEAPDNKENIINQVKTEVTSLSTTFVTGTSAGAVIITTQPRCHIAVSD
SDQVVVRPTVSREDAGEEVNWDEQHHDQPTYHWSQLVPLITTPNRNVSSQQQPKNETDIK
PTTNGDVLPNGRGHMGSTSDIGGVNKCEGGQNRRESCSQDVDFDLSADDDDVFVTDLESA
SSTNNKRRTQSLGSFSGKEEPKSPRKGKGEKEHIRRPMNAFMIFSKRHRPLVHQRYPNQD
NRTVSKILGEWWYALGPEEKQKYHSLASEIKEHHYRAHPDWKWCSKDRRKSSTSSNKGDG
QPYTPGGPGMDGLPLTPGGPNSGPLLTPGGPSSSGPPLTPGVISNTLDTPGTPVSIGPNT
RMIQVSAAGTHVTISHPSITNNNLVNKQFLVPSNGTQTGPRRDTVGSEVSDDDSKMIICE
EGTPEGQRDMTQNKIDTTNEIDLACKEHVGDSDSETQSDTEVNERLRRPYSPTSGGDIKY
KPKPIKGRPSLSTEEVVTLYGPTGSAQLGADQLHVAGKPSPIHLPSTPTLQMPITSTLQS
TGSAFRSMPPSPKVRNVSENNMMQQEGDKLTVSACNHGANIKIISNVSSPAGQKTVMKTN
QIKSFHNLTVTTQERKPVLVDTPISLRTNKNDNNKCSLGGIGSTSVTLPAGTQVIPNSSH
QTFHTGIITSTSGTTTTSVGTLPKAAILMSPGHYTLLNTGVKGGTLMAPSGTSPMHVTNV
VVKTTPATSVGSQPGINKAVSTGSGQPTHVQYLVPSVTPDGKLILPSNLLVSTDPSAKQL
TVTPVSSATSMRMVPSTVVTSTDPGGVIKPITMAGVTKTTVASQTQGMVLISSSRQGITS
VGPQIGVSQAVSLAQSPYQSLSAGRGCGGAAAVVTNSPAAGSLAAITLPLHQLSPSQQLH
QQQQHHQQQQQHQQQQQHQQQQQHQQQQHQQQQQHQQQQQHQHHHHQQHQQQQQQHQQAQ
QQQKVKAQVANIPLATGGASIGVGGVEEEELEDKPKFILAPTPAQLGKAPRQKRLNSTGI
HGYVRRKTHCFALASGQISAIGDTPPQLSPDVKMAPPQHGGGETKVSPAGCDPSDGDSSA
LAAAGANHHITSVPPSPNEKKSFFKKNIEDGMDKVLEEVNFEQKFGALPEFNPDEVQSPS
INANTVPSVPSSPRTFISSYRKKRKHSTGDESEAETPMSVTPHLTPSLTPSSTLQGSKFF
PPDFNPETFKVGEPRSDKSEVDSPAGARSPRTPKTPRDADKSHSSLRHILDQRRTLVMQL
FSEYGWFPSAQAVAAFQLRYSDIFPTKNCLILKIREVRQKVHQNTPNTPGVPSSPNPAAA
ASHASNNQSQQLTHNNHHSARSSLTAGVPTSSQASTTLPVTT
NT seq
8409 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaccatgaataggcgcgggggcaaccgagccaaacgcactgcagaatccaaa
gcttcaggcagttctggccgtggtgcaagagccaccgcccgcagggagggagattcggct
gtacatcagccaccctcgggacacacagcctcgggcaataacatatcccatggcaaaaag
ggagaggaagattatgggtcagtgagggctcataaggatgctgtgtcaggaggcaaaggt
gacgaccctggtggctctgctgagggaatacccacagcaggtgctaacgatgaagcgatt
gtggtgagcagtcagagcagcactggctccagcatgcctgctgctacggtgagccgaccc
cgagttggagttgcaaactccagcaggggctctgccccagcagcaggtactggaagtctg
acatccttaactccagtgagagaagaaaagcagcctgtacatgatgtatgcaagttaccc
aaaaagcgtaagtttgatccatctgaattggaggatatgaatgaaggactgcaaccagcg
actgcaatggtgacagctagtacaactgttagttctgctctggtagtctcaacatctggc
cagctgcgaggcccctccgttagcacatcggtaacaagtcctatggtgtctgtggcacct
atggctgttccagatgctattatcagaccaatagttgttgcagaggttgacgtaaatttt
tccgaaatcaagcctcaagaccttcgggtgaacacatccggtggtggtcgagttaatgaa
aacggaagtggtatccaaagtagcaatggtaaggaaggtaacggccaagataaaattgcg
cctagtgagcctccagttgagtcacagccagtcaacatgaagaacaccagtcatacggta
gtgtcacatgctatcgcaacacacagcgtagtcacctctcaggtgttaaccgttcagcgg
aactctctttctcaacctaacacgcaacttaagcttgcaccagccacgcaagcctcatcc
attcctcacactgccactgtctctacacacattggtctaattcctcagcatcagacaaca
cttgtaacaattcctcaatatcaaggatccctcaactcatcccaacaggtgcagcttcat
catcatcagcagcagcaacaccagcagagacaaaagattcagcagcaacaacaacagcag
caacagcagcaccaccaacaaaggcaacaacatatacagcaccaacaaccacaccagcaa
cctcaccaacaacctcaccaacaacttcaccaacaacctcaccagcaatcacatcaacaa
cctcatcagcaacctcatcagcaacctcatcagcaacctcatcagcaacctcaccaacaa
tcacatcaacaacctcaccaacaacctcaccagcaacctcaccagcaacctcaccagcaa
cctcaccagcaaccacaccagcaaccacaccagcaaccacaccagcaaccacaccagcaa
ccacaccagcaacctcaccagcaacctcaccagcaaccacatcaacaacctcaccaacaa
cctcaccagcaactacatcatcatcaacagcatcttcagcagtcacatcaaactcatcat
caaattcatcagcagtcacatcatcaacagcatcagcaacaacagcagcagcagcaacag
cagcaacagcagcaacagcagcaacagcagcagcagcagcagcagcaacagcaacagcag
cagcagcaacaacagcagcagcagcaacagcagcagcagcagcagcaacagcagcagcag
caacaacaacaacagcaacaattgcagcttcagcagcaacagcagcagatgctgcaacaa
cacgcagtccatatacagcagcctcaccaacaacagcatcttactcaaccctcacaacag
tcacaactacaacatcaagtggggagtgttgggcaccattcagtacacatccctcatatg
gtaccgcctcaagcccattcccaacctgctatctctcaaagtgccaccagctgtctctct
cagtcaccaagttcaaaagtagagtttcctcagccaaagcagtacgcaggcttcaagagt
gttgttgatgctgctgcgcaggctactctttcatctcatcatgtgtctggtgaaacgcgc
gaaggaggggaagtgcctcgaaccccagaaatgtggtcgtctcagcagggtgttgctaga
gcacccgttgacctcagcgagtggaagggtcatagagttttagccaagcgtggcttagtt
tactatccagcagtgattgtaagtgtaaaaaatgcttgtgatcttatagtgaggattgat
gccgatgcaaatagtgatctcttgtacagtaatgtttttacgactggtaaatttgatgtg
ataagtgatgctgttccatctgccaaacagctagtggaaggggcacgtgttgtagtgcgg
ttagataaggaacaactgatgtttgcggaaggggtagtgtatgaaagacagggctcacca
acttcgcaatatttggtgcgcattagtggcgagacaaacaatcaggggtctggtgtggca
aatgaccactggcttcttcggcctcatttacggttacttcaaccaccatggtgggaggat
ttggagccacacgtacaatcatcattgctagccgtttctcaccactataattctcaaaaa
ccaagtggctacccacctccgggcttccaggaaacatctggctctcacttagtgcccact
gccccctcctattcgatggtagcaaccacttacggcaccatcacaccaccgaaccatgta
acaccccctggcagtgtacccatgacacctcttagtggacagtcaggatcagctggcctc
agttctggttcagaagagctgcgcagacgaccaatagatgattacgatagtgatgatgac
cttagaagagaggacatcacatttcctgcagatgggggtcattatagtggtaatcaccgc
tccatgtccctgactccaggtgcactgggcagtaaatatacgggagacccaaagcgctca
tccatgcacagcagaggatccacctcaagcttaatagaacagggaagcataggcactacc
actcctcgatcaacgcctgtcactcccagatctggaactgccactccacttaagtacaag
aaaggtgaggttgtgactactcctaatgggattagaaaaaaattcaatgggaagcaatgg
cgtcggttatgtggtaaggaagggtgcagcaaagagagccagcgtcagggatattgctca
cgacacctttccatgtatggaaaaagactacgcagctcgtcgattacttttagtgctggg
aaagatactccaagtgtagagggtaactgggaagagatgtcgtgtgactcggatacttct
cccaacttccccctaacagccccgcggtctcaagacgaaacagaagctgcaaatatgctt
atgactctgcacaactcgtcaagatcgacaactcctgctggctgcttctctccgacatct
atttcaccaagaggcatccagagtccagtgacagtggggcctaagggaaacgtgttcatg
cctatatctcaacctgctcccatcacctctcctactgggcgagcatggatgtcacacgat
aatagtaaccgacatcctgtgccgtcacttccacaaagacctattataagacccgagtta
cttcgtccagtgactaagctgccatcaacagttagccaggtgacgggcagcacgagtgtg
atccgcgcctccccaagccatactgtgcctatgggtcagtctccagggtcatcagcaagt
ttaagcataaacaacccacaagtgaccctctctccagcagggcctagtgtacatcttcac
caagccccagagtcagtaatacaggatagaagagagcatttgactctgaatccccgtgta
actactatcaacagccaattgataaatgtgtcacaacaaggtcatctctctagaagcctg
ggtggccctggggttacaattacctcaggtgccagtcaaccaactattgcaattctggaa
aaagttcttacctcatcagtacctaacactgccaaagatgatcccaattcacagcctgaa
gatctttctagtagatttcgccccatagatcagtcggggttttgtagtgatcgatctgat
ttgactgatggaaaatcggattttgatattaaacagagagtttcagtcagttgtggagag
caagagggcctacttttgcgtgccaataatgcttccgtaagagatagcggattacacata
tctgaacagtcgtcgcataatcttgataccgcaaaacaagaagctccagataataaagag
aatataataaatcaagtgaaaacagaagtgacatcactatccacaacatttgtgactgga
acttctgctggtgctgttattataactacacaaccaaggtgtcatattgcagtatccgat
tctgatcaagttgtggttcgtccaacagtatctagggaggatgcgggtgaggaagtcaac
tgggatgaacagcatcatgaccagccaacttatcactggagtcaactggttcctcttatt
acaacgccaaatagaaacgtgtcgagtcaacagcagccaaaaaacgagacggacattaag
ccaacaacaaatggtgatgtgttgccaaatggtagaggacatatgggaagcacaagtgat
attggtggagttaacaagtgcgaagggggccaaaatcgtcgagaatcttgtagtcaagat
gtagattttgacttgtcggctgatgatgacgatgtgtttgttactgaccttgagagtgct
tcaagtacaaacaataagagaagaactcagtctctgggatccttctcgggcaaggaggaa
ccaaagagccccagaaagggaaaaggagaaaaggagcacataagacgaccaatgaacgcc
ttcatgatctttagcaaacgacatcgaccgttagtgcaccagcgatatcccaatcaagac
aatagaacagtttccaaaatcttgggtgaatggtggtatgctctgggtcctgaagaaaag
caaaaatatcatagcctcgcctctgagataaaagagcatcactatagggctcatccagac
tggaagtggtgtagtaaggatcgtcgcaagtcatccacaagttctaacaaaggtgatggt
caaccatacactccagggggaccaggcatggatggtcttcctttgacacctggtggaccc
aacagtggaccattgctgactcctggaggaccaagtagttctggacctccgttaacccca
ggtgttatcagtaacacactcgacactcccggcacaccggtatctattggcccaaatacc
aggatgatccaagtatcagcagctggaactcatgtgactatatcacatcctagcattaca
aataataatttggtaaacaaacagttcctggtgcctagtaatggaacacaaactggacca
agaagggacacagtaggctccgaggtgtccgatgatgactctaaaatgatcatttgtgaa
gagggaacaccagagggacagagggatatgactcaaaacaagatagacacgaccaatgag
atagatctagcatgcaaagagcatgttggagattccgattccgaaacgcagagtgacaca
gaagtcaatgaacgcctacgaagaccttattctcccacaagtgggggagacataaagtac
aagcccaaacccatcaagggaagaccatcattgtcaacagaggaggtagtaacactctac
ggcccaacaggctcggcccagcttggggctgaccagttacatgtagctggaaaaccgtct
cctattcatctgccttccacaccaacactccagatgcccatcacatccacactacagtcc
acaggcagtgcatttagatcgatgcctccttctcccaaggttcggaatgttagtgaaaat
aacatgatgcaacaagagggagacaagttgacagtgtctgcttgcaaccacggagcaaat
atcaaaatcatcagtaatgtctcctccccagctggccaaaaaacagtcatgaagacaaac
caaataaagtctttccacaacctcactgtaaccacgcaagaaagaaagcctgttttagtg
gacacgcctatcagcctgcgcacaaacaaaaatgacaacaataagtgtagtttgggtggc
attggcagcacgtctgtcactcttccagctggaacgcaagtgatacctaatagcagccat
cagaccttccataccggaatcatcacatcaacttctggcactaccacaacatctgtggga
acacttccaaaggctgctattcttatgtcccctggacattatactttattgaacacggga
gttaaaggtggtactctaatggcccccagtggcacctcccccatgcatgttacgaatgtg
gtagtcaaaaccactccagccacttctgtaggctctcaaccaggaataaacaaagcggtc
tcgacaggatcgggtcagccgactcacgtgcagtaccttgtaccatctgttacaccagat
ggtaaactgatactgccgagcaacttgctggtgtcgacagacccatctgctaaacagctc
actgtaactcctgtttcatcagcaactagtatgagaatggttccgtccactgttgtgaca
tcgactgatccagggggtgtaatcaagccaatcacaatggcaggtgttaccaagacaaca
gtcgcttcacagactcaagggatggtgttgatctcaagctcccgacaaggaattacatct
gttgggcctcagataggtgttagccaagcagtctcccttgctcaatcaccgtaccaaagc
ctttctgctggtagagggtgtggaggagcagcagcagtagtgacaaactcacctgctgct
ggctccttggctgccataacacttccactacaccagctgtcaccatcacagcagttacac
caacagcagcagcatcaccagcagcagcaacaacatcagcagcagcagcaacatcagcag
cagcagcaacatcagcagcagcagcatcaacagcagcagcagcatcagcaacagcagcag
catcaacatcatcaccaccagcagcatcagcagcagcagcagcaacaccaacaagcacag
cagcaacagaaagttaaagcacaggtagccaatattcctcttgctactggaggtgcaagc
attggtgtagggggtgttgaggaggaagaattggaggacaagcccaagtttatccttgcc
ccaacgccagcacagcttggcaaggctccacgtcagaagagacttaactctacaggcatt
catggttatgtgagacgcaaaactcattgctttgccctcgcttcagggcaaatatcggca
ataggagacaccccaccacagttatctccagatgtgaagatggctcccccacagcacgga
ggcggagaaactaaagtatcccccgcaggctgcgacccttctgatggagactcctcagcg
cttgcagctgcaggagctaatcatcacatcacctcagtccctccttcaccaaacgaaaag
aaaagtttttttaagaaaaacattgaagatggaatggataaggttttagaagaagtaaat
tttgagcaaaaatttggggcattacccgaattcaatcctgatgaagttcaatctccgagc
atcaatgccaacaccgtcccatcagtaccgtcgtcccctcgcacatttatcagctcctac
agaaagaaaagaaagcattccacaggtgatgagtcggaagcggaaaccccaatgagtgtt
acgcctcacctcacgccctcactcacaccatcatccacattgcagggctccaagttcttc
ccaccagattttaatccagaaacttttaaggttggagaaccacgatcagataagtcagag
gtggactcgccagctggtgctcgatccccccgaacgccaaagaccccacgtgacgcagac
aaaagtcattcctcccttcgccacatcctggaccaacgccgcactcttgtcatgcaactt
ttctcagaatatggctggtttccatctgctcaagcagtggcagcattccaattgcgatac
tctgatattttccccaccaagaattgcttgatcttaaagattagggaagtacgtcagaag
gttcaccaaaacacccccaacaccccaggagtgcccagcagtcctaaccctgcagcagct
gcatcacatgcgtccaataaccaatcacaacaactcactcacaacaaccaccatagtgca
agatcatccctcactgccggtgtgccaacgtctagccaagcctccacaacgctccctgtc
accacataa
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integrated database retrieval system
