Procambarus clarkii (red swamp crayfish): 123766715
Help
Entry
123766715 CDS
T07930
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 1 intermediate chain
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04145
Phagosome
pcla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123766715
09142 Cell motility
04814 Motor proteins
123766715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcla03036
]
123766715
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcla04812
]
123766715
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
123766715
Cytoskeleton proteins [BR:
pcla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
123766715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
123766715
NCBI-ProteinID:
XP_069163435
LinkDB
All DBs
Position
60:complement(19894997..19941598)
Genome browser
AA seq
601 aa
AA seq
DB search
MADRKAELERKKAKLMALREEKERRKREKEQKEAQEAAVRASNAPRDDQDLDKMLSSLGV
APVSDKAIAQDFAPCDECKGVFTSLVQQHSTIKTMHLDEVLSSMSSMSSEPGADHSGSPD
KSLEANATASPRTPSKKPPQLSVVSVQATNIPPRETVTYTKGVQTSGSGDGHGYYEDWWR
PRKAHAFDYYGDGILAQIRSKYHSMHEYNLNPALEWDDEFTAEEEDNSLTMLDTPPIYGG
GHNRHLPPGILPTGMPTVQDVKPALATEAEKKMEEEKPQPPRELSDEEKQMLMMTEEFHS
FFDRTTRVMERALAEDANLFVDYSHDYEEDGEANENGGIKLSLNRWFFDERWSRNRCITC
MDWSPQYPELLVASYNNNEDSPHDPDGVALVWNTKFKKDTPEYIFHCQSPVMSATFARFH
PNLIIGGTYSGQIVLWDNRSQKRTPVQRSPLSASAHTHPVYCMKVVGTQNAHNLISVSTD
GKMCSWSLDMLSQPQESMELQHKQSRAVAVTCMAFPHGDVNNFIVGSEEGAVFTACRHGS
KAGIVDAYEGHQGPVTGISTHSTPGPIDFSHLFLTSSIDWTVKLWSVKLMEINVYSNLTE
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggaaagcagaactagagcgtaaaaaggccaaattaatggctttacgggag
gagaaagagaggagaaaacgagagaaggaacaaaaggaggcgcaggaagcagcagtacgg
gccagcaatgcacctcgcgatgaccaagacttggacaagatgctctcctcccttggagtg
gcacctgtctcggataaagcaatagcacaagactttgcaccttgtgacgagtgtaaaggt
gttttcacatctctcgttcagcagcactccacaatcaaaactatgcatttagacgaggtg
ttgtccagtatgtcgagcatgtcctcggagccaggagctgatcacagtggctcgcctgac
aagagcttggaagccaatgctacagcttctccacggacacctagtaagaagccaccccag
ttgtcagtagtgagtgtgcaagccacgaacattcccccgcgtgaaacggttacctacacc
aagggagttcaaacttcaggatccggggatggccacggttactatgaggactggtggagg
ccccgcaaagcccatgccttcgactattacggagatggaatcttagctcaaattcgatct
aaataccacagtatgcacgaatataatctaaacccagcgctagaatgggatgatgaattc
acagctgaagaggaggacaattcactgaccatgctggatacaccgccaatatacggaggg
ggccataaccgtcacctgccgccagggatactccccactgggatgcctacggtgcaagat
gtaaagccagcattagcaacggaagcagagaagaaaatggaagaagagaagccacaacca
ccacgagaattgtcagacgaagagaaacagatgctgatgatgacggaagaatttcacagt
ttctttgatcgtaccacacgtgttatggaacgagccttggctgaagatgccaacctcttt
gtggattattcacatgactatgaagaggatggagaagcaaatgaaaatggcggaataaaa
ttgtctttgaatcggtggttcttcgatgagaggtggtctcgtaaccgttgcatcacgtgc
atggattggtcccctcagtacccagaactgttagtggcaagctacaacaataatgaggac
tctccacacgatcctgatggtgttgctctagtttggaacaccaagttcaagaaggacacg
ccagaatatatctttcactgccagtcccctgtaatgtctgctacttttgccaggtttcac
ccaaatcttatcattggaggtacttactcagggcagattgttttatgggataaccgcagt
cagaagcgaactccagttcaacggagccccctctccgcctctgctcacactcatccagtg
tactgcatgaaggttgttggcacacagaatgctcacaacctgatcagtgtgagcaccgat
ggtaagatgtgctcgtggtcccttgacatgctgtcacaaccacaggagtctatggaactg
caacacaaacaatcccgggctgttgctgtaacttgcatggcctttccacatggtgatgtc
aacaacttcatcgtaggatcagaagaaggagcagtctttactgcttgccgccacggaagt
aaagccggtatcgtggatgcctatgaggggcaccagggtcctgtgacgggcataagcacc
cattcaacccctggtcccatcgatttctctcatctcttcctcacttcttccattgactgg
acagtcaagttatggtcagtgaagttaatggaaataaatgtttattcaaatctaacagaa
ttctga
DBGET
integrated database retrieval system
