Entry |
|
Name |
(RefSeq) m7GpppN-mRNA hydrolase
|
KO |
|
Organism |
pcla Procambarus clarkii (red swamp crayfish)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pcla00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123766750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pcla03019]
123766750
Enzymes [BR:pcla01000]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
123766750
Messenger RNA biogenesis [BR:pcla03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123766750
mRNA degradation factors
5'-3' decay
Decapping complex
123766750
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
60:complement(17193154..17223613)
|
AA seq |
427 aa
MMAPPPGIKSTFIIPTDLLDDIASRFLLDAPDSELGNPISLCFLTELAYWFYLDEYAEED
DSLNNLKFDPFAQQLLNRVGFKPQTGTIEDMLQGFRDFKHRVPTYGGLLLNQDLSQVLLV
QGFWHRASWGFPKGKINVDEEPHNCAIREVLEETGYDISPLIDPSGYLETSIGEQFVRLY
IIPGVSTTTEFVPRTKGEIKQLKWFPISQLPSHKNDRNFNKVNGSTNMFYMVMPFVKPLR
EWLANRQRAAVNGTGNGAGREGRRRHRSSTTAADHNQSYSQTRHSHSPATTSDTAKRPQP
TPDTSRKQQSTAFSSYIQEEAAGFERLRINTDSSPRRREASTKAKSRKSLFGEQEENPKF
TFKSRGKGRSNKTNRENQPASNGNSSNAITWETKPNFRSYSWQSFHINKKEVMDAVERVW
SSSTLGL |
NT seq |
1284 nt +upstreamnt +downstreamnt
atgatggcacctccaccagggatcaaaagtaccttcataatcccaactgatctgcttgat
gacattgcaagtcgatttctgcttgatgctccagattctgaactggggaatcccatatcc
ctgtgctttctgacagagttggcttactggttctatctggacgagtacgcagaggaggat
gactcgctcaacaacctcaagtttgatccatttgctcagcagcttttaaatagagttggc
ttcaaacctcagactggaaccatagaggatatgctgcaggggttccgtgactttaaacat
cgggtgccaacatatggcggcctcttgctcaaccaggacctcagccaggtcctactggtg
cagggtttctggcaccgtgcttcatggggttttccaaagggcaagatcaatgttgatgag
gaacctcataactgcgccatcagagaagtacttgaagaaactggctatgacatatctcca
ctgattgacccaagtgggtacttggaaacatctattggggagcagtttgtgcggctttac
atcattccaggcgtctccactactacagaatttgtaccacgcaccaaaggagagatcaag
caactcaaatggtttcccatcagccagctgccatcacataagaatgaccgcaactttaat
aaggtcaatggctcgactaacatgttttacatggtgatgccctttgtcaaaccgctcaga
gaatggctggccaaccgtcagagggcagctgtgaatggaactggtaatggtgcagggagg
gaagggcgaaggcgtcaccgcagttccacaactgcagctgaccacaaccagagttacagc
cagacaagacatagccattcacctgccacaacttccgacactgccaaacgaccacagcct
actccagacaccagcagaaagcaacaaagtacagccttttcttcatacatacaggaggaa
gcagcaggttttgagagattgcgcatcaacactgacagctcacctcgcagaagagaggct
tccaccaaggcaaaatcacgcaaatctttatttggagaacaagaagaaaacccaaagttt
accttcaagagtagagggaagggccgcagcaacaaaaccaacagagagaatcagccagca
agtaatggaaacagcagtaacgcaatcacatgggaaacaaagccgaacttccgctcatat
tcttggcagagttttcacattaacaaaaaggaagttatggatgcagtcgaaagagtatgg
agtagttcaacactgggcttgtaa |