Procambarus clarkii (red swamp crayfish): 123766891
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Entry
123766891 CDS
T07930
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123766891 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123766891 (Vps35)
Membrane trafficking [BR:
pcla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
123766891 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
14-3-3
Motif
Other DBs
NCBI-GeneID:
123766891
NCBI-ProteinID:
XP_045612303
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All DBs
Position
60:complement(11036741..11069579)
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AA seq
804 aa
AA seq
DB search
MADQIDNMVSPMDDQDKLLDEAMGAVRGQAFQMKRCLDKGRLMDGLKHASNMLGELRTSL
LSPKTYYELYMCICDELRHLEMYLIDEFQKGQRVADLYELVQYAGNIVPRLYLLITVGLV
YIKTNETCKRDILKDLVEMCRGVQHPLRGLFLRNYLLQCSRNILPDVDDPPSGHNSEDFP
SGSISDSVDFILMNFAEMNKLWVRMQHQGHSRDKDKRERERQELRILVGTNLVRLSQLEF
VDVHRYKRMVLPGILEQAVSCRDPLSQEYLMECIIQVFPDEFHLQTLSAFLKACAELHAE
VNVKNIIISLIDRLANFAHREDGTGIPDDIKLFEIFSEQVSQVIKSRPDMPMEDTVSLQV
SLVNLAQKCYPDEIEYVDKVLQNTLEVFQKLNIDKIHSGAALGKELSRLLRLPADNYNNL
LTVLQLQYYTPLLGLLDYSGRKILSTYLVTNAVENETFIPTQEQVDAVLSMVASLICDQS
DQPLVEPDPEDLAEEQGLLARFLHFFQSPSSDQQYLMLTTARKHLGAGGNKRVLYTLPPL
VFQAYQLAFKYHAEREEDDKWSKKVHKIFQFCHQTITALVKAEYAELPLRLFLQGALAID
KIEFENHETVAYEFMSQAFSLYEDEISDSKAQLAAMTLIMGTFQQTTCFSEENHEPLRTQ
CALAASKLLKKPDQARGVTTCSHLFWSARSQYTNKEELRDEKRVLECLKKAVRIANQCMD
PSTQIQLFVELLNHYIYFYEKGNSQVTVAMLNQLTSKVKEDLANLETTEETDQISRHLTN
TLTHLRLRLQEPATDGPSYEGLQV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcagatagacaacatggtttctccaatggatgatcaagataaacttctcgat
gaagcgatgggagcagttcgaggccaggcattccaaatgaaacgatgtttagacaagggt
cgcctaatggatggactgaaacatgcatcaaatatgcttggagaactgagaacatcactt
ctttcccctaaaacctattatgaactctacatgtgcatttgtgatgaactacgtcacttg
gaaatgtacctcattgatgagtttcagaagggccagcgtgttgccgacttatatgaactg
gttcagtatgctgggaatattgtacctagactatatctgctgatcacagttggcttggtg
tacataaaaacaaacgaaacgtgcaagcgtgatatcttgaaggatctagtggagatgtgc
agaggagtacagcatccccttcgtggactattcttgaggaactacctccttcagtgcagt
cgtaatattttgccagatgttgatgaccctccttctggacacaactcggaagattttcca
tcaggttctatctcggatagtgtcgacttcattttaatgaactttgccgagatgaataag
ttgtgggtgaggatgcagcaccagggacattccagggacaaagacaagagagagcgtgag
aggcaagagttgcgtattttagtggggactaacctggtccgcttgtcacagttagagttc
gttgatgtgcacagatataagcggatggttcttccagggatcttggaacaagctgttagc
tgccgtgatccactctctcaagaatatttaatggaatgcatcatccaggtgtttccagac
gaatttcaccttcagacactaagtgcatttcttaaagcctgtgctgagctccatgccgaa
gtcaatgtcaagaatattatcatatctcttatagatcgtctggctaattttgctcatcgt
gaagatggaactggaatccctgatgatatcaaactatttgaaatcttctccgagcaagtc
tcccaagttatcaagtcccgaccagatatgcccatggaggacactgttagcttacaagtc
tcccttgtcaatttggcacagaaatgctatccagatgaaatagagtatgtggacaaagtg
ttgcagaatacactggaagtttttcagaaattgaatattgataaaattcactcgggtgca
gccttgggcaaggaattgagtcgcctacttcgtcttcctgccgacaactacaacaacctc
ctaacagtgctgcagctacagtactacactcctttgcttggtctcttagactatagtggg
cgcaagatcctcagcacttaccttgttactaatgctgttgaaaatgaaacattcatacca
acccaagaacaggttgatgcagtactgtccatggttgcatcactgatttgtgaccagtca
gatcaacctctggtggaaccagatcctgaagatttagctgaagaacaggggctactggca
aggttccttcactttttccagtccccaagtagtgatcaacagtatttaatgttgacaact
gctcgtaaacatctgggtgctggtggcaataagagagtgttgtacacgctgccaccactt
gtattccaagcttatcaactggcttttaaatatcacgcagagagagaagaggatgacaag
tggagcaagaaagttcacaagattttccagttttgccatcagacaattacagcactagtc
aaggcagagtatgctgaactaccattgagacttttcttacaaggagctcttgccattgac
aagattgaatttgaaaatcatgagaccgttgcctacgaatttatgtctcaggcattctcc
ctttatgaagacgagatcagcgatagcaaagctcagttggcagctatgacgcttataatg
ggtacattccagcagacaacatgtttcagcgaagagaatcatgaacctctaagaacgcag
tgcgctttagcagcttctaaactgctgaaaaaacctgatcaagcacggggagtcacaaca
tgctctcacctgttttggtctgcacgctcacaatacaccaacaaggaagagttgcgcgat
gagaagcgggttctagaatgcttgaagaaggccgtacgcattgctaaccagtgcatggat
ccttctacacagattcagcttttcgttgaactcttgaatcactacatatatttttatgag
aagggcaattcacaggtaactgtggcaatgcttaatcagctgactagcaaagtaaaggaa
gatctggcaaacttggagactactgaagaaactgatcaaatttcaaggcaccttactaac
acactgacacatcttcgactcagactacaagaaccagcaactgacggccctagttatgaa
ggtctccaagtttaa
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