Procambarus clarkii (red swamp crayfish): 123766924
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Entry
123766924 CDS
T07930
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog B
KO
K13174
THO complex subunit 5
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03013
Nucleocytoplasmic transport
pcla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123766924 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
123766924 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123766924 (thoc5)
03041 Spliceosome [BR:
pcla03041
]
123766924 (thoc5)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123766924 (thoc5)
Spliceosome [BR:
pcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123766924 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DurN
Motif
Other DBs
NCBI-GeneID:
123766924
NCBI-ProteinID:
XP_069163548
LinkDB
All DBs
Position
60:8861317..8892277
Genome browser
AA seq
745 aa
AA seq
DB search
MGRGDEDGDTGTRESKRRRKAGPELTKKPGAAGEAENATPTPPTPARTLAKEKTVTITDS
YQASLDHECLEAQERTEEEDQKLVAAIMQQIRSLMKEILKLKLDRPDQWVNEVEERRIQV
LMLMLSFRRLSRVQKVRVRDSREKTAEARQSVDGVTLQLQNLLYEVAHLKKEVRRCLDFQ
SADQEIDLVPVEQFYVEAPEYISRPADTVEDPHEQRLARLQWELEQRRDQTQLFDKLTQE
KEAVAETINEQERKLASLAPRINSILEATRPLQDALDLPIDAKREQQRIVQLLPSPLYTL
WVQASSYGEAFDPSIKVEVFGDVDAAKKLIVKEEDSRTENLSESENDQDQQEENLSRKKR
NRKSQKMDAEDIDDGLKQILGLHPLFVKINVNTKEGNNVVIAFYYMQTLRIVTAKCSVHL
HEKTKSAMTDVISGDTLLNCLFPDDDGQTSPNPANFFQLNRLRINLSDHLTTTGRPYKWA
QTLAGLSFSNSKQSCVGGEESQEMAAGAGISGGDTEVVAWQDSAEQMPHTIQAIRRRLQA
RLALHAQLVNLETVNSTSSIAIPAELLRQHFPGKVCSELKSWRPVTWADYEAAPSTQSLR
EAQVVTQQHLLFLAIFERKHVRLEALVAVSPDHPSTVPVVALSLLWEGHHQTTNNPQLRH
MEKEVNVHWDELVSSRSDRLHLLPLILYRLAVCLDVYTEAYSAHADARGPDAQFHKEKIF
FRPARGPDRAFPFKYHPKLGVFSQR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaggggacgaagatggcgacacggggactcgagaatcaaaacgtcgacgcaaa
gccgggccagagttgaccaagaagcctggagcagccggagaggctgagaatgcgaccccg
acgcccccgacgccggcccgcaccctggccaaggagaagactgtcaccatcactgattct
taccaggcaagtttggaccatgaatgtctggaggctcaagagagaacagaggaagaagac
cagaagcttgtggctgccattatgcaacagatacgatctctgatgaaagaaattctcaaa
ctgaagcttgacaggccagaccagtgggtaaacgaggtagaagagcgacgcatccaagtg
ctgatgctgatgctatcatttcggcgtcttagtcgagtgcaaaaggttcgagtacgtgac
tcccgagaaaaaacagctgaagctcggcagagtgttgatggcgtgacattgcagttgcag
aaccttctctatgaagtggcccatctgaagaaggaagttagacgttgtcttgattttcag
tcggctgaccaggaaatagatcttgttcctgtggagcagttttatgttgaggctcccgag
tacatcagtcgaccagctgatactgtggaggatccacatgagcagcgcttggctcgtctt
cagtgggagctggagcagagacgtgaccaaacacagctgtttgacaaactcactcaggaa
aaggaggctgttgcagaaacaataaatgaacaagaacgtaagctagcatcactagctcca
aggattaactcaattttggaggctactcgtccacttcaagatgctttggacttgccaata
gatgccaagagggagcagcagaggatagtacaactactgccaagtcctctgtacactctt
tgggtgcaggcatcatcatatggggaagcatttgaccccagcattaaggttgaagtcttt
ggagatgttgatgctgccaagaagctcatcgtcaaagaggaagattccagaactgaaaat
ctgtctgagtctgaaaatgatcaggatcaacaggaggagaatctgtctcgaaagaagcgc
aatcggaagtcacagaaaatggatgccgaagacatagatgatggattgaagcagatacta
ggactacatccactctttgttaagatcaacgttaacacaaaggagggaaacaatgtggtt
attgcattttactatatgcaaaccttacgtatagtgactgcaaagtgctcagtgcacctt
cacgaaaaaaccaagtctgctatgacagatgtgatcagtggagatacactcttgaactgt
ctcttccctgatgatgatgggcagacatcaccaaatccggccaacttcttccagctgaac
cgtctgcggattaatctatctgatcatctcactacgactggtagaccatacaagtgggct
cagaccttggctggtttatcattttcaaattcaaaacagtcatgtgttggtggtgaagag
tctcaagaaatggctgcaggagcaggaatctctggtggtgacactgaggttgtagcatgg
caggacagtgctgagcagatgcctcacaccattcaggcaattcgtcgcagactgcaagct
agactggctctacatgcacagctagtcaacctggaaactgttaattcaactagttcgatt
gcaatacctgctgaacttctacgtcagcacttcccaggaaaggtgtgttctgagctgaag
tcgtggcgccctgtcacttgggccgactatgaagcggccccgtccactcagtcattacgt
gaggctcaagttgtcacgcagcagcatttattgttcttggctatatttgagcggaaacat
gtacgtctggaagcactggtagcagtgtctccagatcatccaagcacagttcctgtggtg
gcactgtctctcttatgggagggccaccaccaaacaactaacaacccacagctaaggcat
atggagaaggaggttaatgtacattgggatgaattagtatcatctcgcagtgatcgcctt
catctcctcccattgattttataccgactggcagtttgtttagacgtatacaccgaggca
tacagtgcccacgctgatgctaggggaccagatgcacagtttcataaggaaaaaatattt
ttcagacctgccagaggcccagacagagcattccctttcaagtaccatccaaaacttggg
gtcttctctcagcgttaa
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