Procambarus clarkii (red swamp crayfish): 123767058
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Entry
123767058 CDS
T07930
Name
(RefSeq) glutamate receptor ionotropic, kainate glr-3 isoform X1
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcla04040
]
123767058
Ion channels [BR:
pcla04040
]
Ligand-gated channels
Glutamate (ionotropic)
123767058
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
BACOVA_N
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
123767058
NCBI-ProteinID:
XP_045612481
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Position
53:24512534..24536138
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AA seq
711 aa
AA seq
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MKVWRVLWLTVLVTSLVAAEVVQAEVGQAEVVQAEVVQAEVGQAEAGVDLVGRVVRQVME
QHLAHCHVVLLEETQHNSVLPKIVRDVASGVVVVEAQRVMGETEAAKDQLLQGLWGDPAR
NCRALLVFLDHSAHHAANNTPVFRFLEWCGLWQRPDVRVVVVGTGTHDRAVLLHHSLRNT
LHALYLALLQRHKTPRSSSPSARLRNGSSRGAGDQVCAGAGDQVCAGVGDQVWVYRRCLY
CEEGDAGVQLLQQADATAVPRRWREDGFFNDPVLDMNGHKSRIAIRPYFPFIDFEVPSDP
SKPVSPLDSLDVRMLNAIAAHLNFTYEMREPLDKQWGIPGSGGNWTGVMGELQQQRADHT
TMLMLTPGRSRVVQFSKLYTNDPIVLVSLKPQPLPRHLSIIRPFPDSVWQLLLASMVGWS
VALWVMLKVGSTLLGGRSFKLSYSFNFGWAILMGNPQDHIPSSLMARILVGCWLIVSLVL
SSAYRSALMANLAVQEYSRPINSFQDLVKRPGFTWGSIVEVRLSAFREFFTENGPLMRRI
YDKMEIREFYQGLARVLKGRHAFIIWKNLVKPVIARQYTDSRGQNPFALSTTEYPYLLGY
SWGFRRGAPFRLRFATLQQRLIESGLVNYWLEDVLARNMTKSNTQTSQYQEGSGGDQVVL
GLDHLQGAFYILLLGSCFALVVLLAEHLTHLIHTRRQTLQDDLDGFKTSWT
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctggcgagttctgtggcttaccgtcctggtcacctcgctggtggcggccgag
gtggtccaggccgaggtgggccaggccgaggtggtccaggccgaggtggtccaggccgag
gtgggccaggccgaggcaggtgttgacctggtgggccgagtggtgaggcaggtgatggag
caacatctggcccactgccacgtagtgctgctggaagagactcaacacaactctgtctta
cccaagatcgtcagggatgtggctagcggtgtggtggtggtggaggcccagcgagtgatg
ggcgagacagaagcagccaaggaccagctcctacaaggactgtggggagatcctgcccgc
aactgtagagcgctccttgtcttcctggaccactctgcccaccacgccgccaacaacacc
ccggtgttcaggttcctggagtggtgcgggttgtggcagcggccggacgtccgggtggtg
gtggtgggcaccgggacccacgaccgggcggtgctcctccaccacagtctccgcaacacc
ctccacgccctctacctcgctctccttcagcgtcacaaaactccccggagttcctcaccg
agcgctcggctcaggaatggttccagtagaggagcgggagaccaggtgtgtgcaggagcg
ggagaccaggtgtgtgcaggtgtaggagaccaggtgtgggtgtaccgacggtgtctgtac
tgtgaggagggcgacgccggcgtccagctgctccagcaggcggacgccaccgccgtcccc
cggcggtggcgggaagacggcttcttcaatgacccggtgttggacatgaatgggcacaag
tcacggatagcgatcaggccttatttccccttcatcgactttgaggtgccgtctgacccc
tccaagccggtcagccctttagactctctcgacgtccgtatgctgaacgcaatcgctgct
catctaaacttcacgtacgagatgagggaaccgctggacaagcagtgggggatacccggg
agcgggggcaactggacgggtgtgatgggggagcttcagcagcagcgagctgatcacacc
accatgctcatgctcacccctggcaggagccgcgtcgtccagttctctaagctttacacc
aatgaccccatagtcctcgtctccctcaagccacagcctctgcctcgtcacctttcaatc
atcagaccatttccagattcagtgtggcagttgttgctggcgagcatggtggggtggagc
gtggcgctctgggtgatgctgaaggtgggctccacgctcctgggtggcaggagcttcaag
ctgagttactcctttaactttggctgggccatcctcatggggaaccctcaagaccatatt
ccttccagcctcatggctcggattttggttggctgctggctaattgtgtccctggtgctg
tcgtcagcgtacaggtcggcactaatggccaacctcgccgtccaggagtactcccgccct
atcaacagcttccaggacttggtgaaacgtccaggtttcacctggggttccatagtggaa
gtgcgtttgagcgccttccgagaattcttcacggagaacggacctctcatgcgccgcatt
tatgacaaaatggagatcagggagttttatcagggtctggcccgggtgctgaagggacgc
cacgcgttcatcatatggaagaacctggtgaagccggtgatagcgaggcagtacacagac
agtcgtggccagaaccccttcgccctcagcaccacagagtacccctacctgctgggctat
agctggggcttcaggagaggggcgccattccgtctacgcttcgccacacttcagcagcga
ctgatcgagtctggtctggtgaactactggctggaggatgtcctggccaggaatatgacg
aagtctaatacacagacgagtcagtaccaggagggttccggaggagaccaggtggtgctc
ggcctcgaccacctacagggtgccttttacatactactactggggtcctgcttcgccctc
gtggtcctgctcgccgagcacctcacccacttgatacatactcgtcgccaaacactccag
gatgaccttgacggcttcaagacctcctggacgtag
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