Procambarus clarkii (red swamp crayfish): 123767069
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Entry
123767069 CDS
T07930
Symbol
Tomosyn
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcla04131
]
123767069 (Tomosyn)
Membrane trafficking [BR:
pcla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123767069 (Tomosyn)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
123767069 (Tomosyn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
WD40_like
Lgl_C
PEP5_VPS11_N
Synaptobrevin
Beta-prop_LRRK2
Beta-prop_NOL10_N
WDR54
Motif
Other DBs
NCBI-GeneID:
123767069
NCBI-ProteinID:
XP_069195230
LinkDB
All DBs
Position
5:complement(7939856..8430319)
Genome browser
AA seq
1551 aa
AA seq
DB search
MKKFTLKHVFEGFRSTVQQPTAKPEQVSVVESLRQDNFQVAKTVRHGFPYQPTAVAFDPI
QKVLAVGTKHGSIRLIGRPGVDVHVKHESEAAVLHVLFLMNEGALVTATADDFIHLWNYR
QKRPEIVHSLKFQRERITCLHLPFQSKWLYVGTERGNIHIVNIEVFHLSGYIVNWNKAIE
LSRKTHPGPVVHLSDCPVDPGKLLIGYESGQLVFWDLKTRTAEVRFQCAEPLKSISWHHE
GKQFMCSHTDGSLTTWAIKQTGPKPSSVIFPHAKTNKEGKQETCKSIQKVEWKSSKTGES
FVIFSGGLANDRAGRTPSITVIHGKTTTVLEMEHNVVDFVTLCETPYASEFAEPYALVVL
LHNDLVVVDLHSPGYPCFENPYSMDLHESPVTCCTYLADCPADLIPAFYSVGARGQKRQG
FSEREWPICGGEWGSTSCSYAEMIITGHADGSIKFWDASSVSLQVLYKLKTAKVFEKPKT
RSIDGDEDPFAIQHIFLCPESRFLCVAGATSHVILFKYSKQETVAEISCLEIPIVYEVYE
SGDCSPEYEFPPRPTLQASVDYFVPIHVRGGSQKKASGYQAELVCVTPWVEGEPPGPITA
LAINSSYGLLSYGNESGLVIVDYVAKSCLLNMGTPDLYGAADPYQRVPRSPKRNESSKEE
ERCKSPSSDQDNKDLGSSTFYLRRDQSETDELIRKESKEDLKDSRKSVNRSDSKGDSEVL
KLLRKDSKGIEKTKDEKKNSNGKYGSDAKAEIMKLLGRKESKGKERDDRDSKGKEGERED
KFVDDFLLVKKNSASEGNDGAEEAAEQVNDDLWQWEEGEDDDDKAEGGYELRPDRPRSRS
ITPEHFPKTEMGDDKQNNHDAAKRHSRFRLKEQLTKLDAKFRKAFSSEHNSIEQNSDFYV
DDITVIGPDGERKEIENTSDHKGSTDIEDAEEAEEAKDDSEKGNEVNIESNNHEVKPGAF
SASPKLSPRETPKTSPRPTPKATPRPSPIDEAKFIEQDLAKKPNVQEGADRKSLALFDKD
GNPVPPPRRKVRLSEVKQKSSKSSFSSCDLGKESNVSHAQGAGNAGPLSISPVEESGGFS
DHHKFFQKCQGSDTTPVQTPSHTGATPPTAGASITSPNSKGAFKTFVSHITKRGSSHALQ
DKLDGSFSRSRSSSISSLENISSEAIQCLSFVDSYTRKNDTQMAPTLWVGTSLGSVIQVM
VSIPPPETRATTPATVSPSGTIFRLKGSVLAMSFLDCNGALIPYQYESWKDANRERKLER
TPTKSLVDNRMSPTNSGEQTWGDRQFVVIASEKVARVVALPSQNCVYKQIITELSFVVKA
EIIQIKDSVCLVCYVATGHLSVFSLPSLRQLIYVDFLPLVDLSFQTRKTGIVDPMLSIWG
QQMFVNEDTDQIARTFCFTNYGHGMYLCSPTEIQKFTLASDFCKDLQDLLGELFLPCDMP
EAPKQSFFKGLFGGGVSQLDREELFGESSGKGSRSVAKHVPGPTAQLEALNVRAGTVAGD
IAKTRNQLVERGQKLGDLEERTGKMMNEAESFSSVAHQLMLKYKDKKWYQL
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaccttgaaacatgtcttcgaaggatttcggtcgacggtacagcagccg
acggccaagccggagcaggtgtcggtggtggagtcccttcgtcaggacaacttccaggtg
gctaagactgtgcgtcatggcttcccctaccagcccacagctgtggccttcgatcccatc
cagaaggtgctggcggtcggcaccaaacacggatccatcaggctgatcggtcgtcctggt
gtagacgtgcacgtgaagcacgagtcggaggcggccgtgctgcacgtgctcttcctgatg
aacgagggcgccctcgtcaccgccaccgctgatgacttcatacacctgtggaactatcgc
cagaagcgaccagagatcgtccactccctcaagttccagcgggagaggatcacgtgcctc
cacctgccgttccagagcaagtggctgtacgtgggcacggaacgaggcaacatccacatc
gtcaacatagaagtgttccacctctctggatacatcgttaactggaacaaggccattgaa
ctgtctcgcaagactcacccaggccccgtggtgcatctcagcgactgtccggtcgaccct
ggcaagctgttgattggctacgagagtggccaactggtgttctgggacctcaagactcga
acagccgaagtccgcttccaatgtgccgaacctctcaagtccatcagttggcaccatgag
ggcaagcagttcatgtgctcacacacagatggctctcttaccacctgggccatcaagcaa
actggccctaaaccctcctcggtcatatttccacacgcaaaaacaaacaaggagggcaaa
caagagacttgtaaatccatacaaaaagtggagtggaaatccagcaaaacaggagagtct
tttgtcatattctccggagggctggcaaacgaccgagcagggcggacgccaagtatcacc
gtcatccatggcaagacaacgacggttctcgagatggagcacaatgttgttgacttcgtt
acactctgtgaaactccttatgctagtgagttcgcagagccatacgccctggtagtctta
cttcacaacgatctcgtggtggtggacttgcactctccaggctacccatgttttgaaaat
ccttattcgatggacctgcatgagtcgcccgtcacctgctgtacgtacctggccgactgc
cccgcagaccttatcccagccttctattccgtcggggcccggggtcagaagcggcagggt
ttcagcgagagagagtggcccatttgtggtggtgaatggggctcaacgtcgtgtagctac
gcagagatgattatcaccgggcacgctgatggcagtattaaattttgggatgcatcctcg
gtcagtctacaagtactctacaaactcaaaacggcaaaagtatttgagaaacccaaaaca
cgaagcattgatggggatgaggatccttttgcaatccagcatatcttcctctgtccggag
tctcggtttctgtgcgttgcgggggccacgtctcatgttatactcttcaaatactccaaa
caggaaaccgttgcagaaatttcatgtctggagatcccaatcgtgtacgaggtttatgag
tcgggcgactgttcgccggagtacgagttcccgcctcgccccaccctccaggcatcggtg
gactattttgtgccgatacacgtacgaggtgggtcacagaagaaagcatcgggttaccag
gccgagctggtgtgcgtgacgccctgggtggagggagaacctcctggacccattacggcc
cttgctatcaactcctcctatggactattgtcgtatggtaacgagagtgggttggtgatt
gttgactatgttgccaaatcgtgcctactgaacatgggcacgccagacctgtatggggcg
gccgacccataccagcgtgtccctcgctcaccgaagcgcaacgagtcttctaaagaggag
gagcgttgcaaatcaccctcgtctgatcaggataataaggacttgggatcatccacattt
tatctacgccgtgaccaaagtgaaactgatgagttgatcaggaaagagagcaaggaggac
ctgaaagactcgagaaagtcggtgaaccgcagtgatagcaagggggactcggaggtcctt
aaactattgaggaaggacagcaagggaatagaaaagactaaagacgagaagaagaattcc
aatggaaaatatgggtccgacgccaaggcggagatcatgaagcttctcggacgaaaggaa
agcaaaggaaaagagagagatgacagagatagcaaagggaaagaaggtgagagggaagac
aaatttgtggacgattttcttctagtcaagaaaaactcggcaagtgaaggaaatgatggt
gctgaggaggctgcggaacaggttaatgatgatctctggcaatgggaagaaggggaagat
gatgatgacaaggctgaaggtggttatgagttgagacccgaccgtccaaggtcgaggtca
atcacacctgagcacttcccaaagaccgagatgggagatgataaacaaaacaatcacgat
gctgctaagagacattcaagattcagactaaaagaacagcttacaaaacttgatgcaaaa
ttcagaaaggcattctcttctgaacacaactccattgaacagaattcagacttttatgtg
gatgacattacagttattgggccagatggagagaggaaagaaatagagaatacatcagac
cataaaggaagtactgacattgaagatgcagaagaagctgaagaagcaaaagatgattct
gaaaagggaaatgaggtaaacattgagagcaacaaccatgaagtgaaacctggtgccttt
tcagctagtcccaaattaagtcccagagaaactcctaaaaccagtcccaggccaacccca
aaagccaccccaaggccaagccccattgatgaagccaaattcatagaacaagatcttgcc
aaaaagccaaacgttcaggaaggtgccgaccgaaaatctctagcgctctttgacaaggat
ggcaatcctgtaccccctccacgacgcaaggtacgactttcagaagtcaaacaaaagagc
agcaaaagttctttcagcagctgtgatcttggcaaggaatcgaacgtttcgcatgctcaa
ggtgccggtaatgctggaccgctttcaatttccccagtagaggaaagtgggggcttctct
gaccaccataaattctttcaaaagtgccagggttctgacacgactcctgttcagaccccc
tcccataccggggcaactccacctacagcaggagccagcataactagcccaaacagcaag
ggagcattcaagacttttgtcagccacatcaccaagagaggctcctcgcacgcactgcag
gacaagttagacggttcatttagccgctctcgttcgtcgagtatcagcagtctggagaat
attagcagtgaagcgatacagtgtttgtcctttgtggattcctataccagaaaaaatgat
acacaaatggccccaacgctgtgggtgggtacgagtctaggctctgtcatacaggtgatg
gtatccataccaccaccagagacgagagcgacgactcccgcaacggtgtcgccaagcgga
accatctttcggttgaaggggtctgtgcttgccatgtctttcttggactgcaacggggct
ctcatcccttaccagtacgagtcgtggaaggacgcaaacagagagaggaagctagagagg
acgcctacaaaatctctcgtagacaatagaatgtctccaacaaactcaggagaacaaacc
tggggagacagacagtttgttgtgatagcatcagagaaggtagcaagagtggttgcgtta
ccgtctcagaactgcgtgtacaaacaaatcatcacagagttgtctttcgttgttaaggct
gaaattattcaaataaaagacagcgtttgtttagtgtgttatgtcgccacgggacatctc
tccgtgtttagtttgccgagtttgcgtcagttaatttacgttgacttcctaccccttgtt
gacctcagttttcagacgaggaagactggcatagttgaccctatgctgtctatttggggt
cagcaaatgttcgtaaatgaagatactgaccaaattgcgaggactttctgctttacgaat
tatggccacggaatgtatctctgctctccgacggaaattcaaaagtttactttggcatct
gatttctgcaaggatctccaagacctattaggggaacttttccttccgtgtgacatgcct
gaagctcccaagcagagcttcttcaaggggctcttcggaggcggtgtatcacagttggat
cgggaagaactctttggtgagtcctcagggaagggatcacgcagtgtagccaagcatgtg
ccaggcccaacggctcagctggaggcactaaacgtgcgtgcaggaacggtcgctggcgat
attgccaagactcgaaaccagttagtagagcgcggacaaaagctgggtgacctagaagag
agaacgggcaaaatgatgaacgaagcggaatccttctcctcggtcgcacaccagctcatg
ctcaagtacaaggacaagaaatggtaccagctctga
DBGET
integrated database retrieval system
