Procambarus clarkii (red swamp crayfish): 123767074
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Entry
123767074 CDS
T07930
Name
(RefSeq) zinc finger protein ubi-d4 A isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123767074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123767074
03036 Chromosome and associated proteins [BR:
pcla03036
]
123767074
Spliceosome [BR:
pcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123767074
Chromosome and associated proteins [BR:
pcla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123767074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
TNP-like_RNaseH_C
Lar_restr_allev
zf_RING_Vps8
PHD_4
zf-C2H2_4
PHD_2
Motif
Other DBs
NCBI-GeneID:
123767074
NCBI-ProteinID:
XP_045612509
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All DBs
Position
53:22893727..23025987
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AA seq
540 aa
AA seq
DB search
MADTLVQTNLEKISSFLQDVQYRSLMINSANYNVRLMRERKTRLPFLDSQTGIAQNPCKL
YMSARHRMPGTVEGQLYVYPSQRWCCRKRSYMALAHQSIKEPEGDEHTIVTVENPAAVNT
EETSFVYETKEPFYFDDTGFLEEEEEEPDDDDDDTYSTRAAPTRKRKKAPKIPKPVKTPS
SRGRKKKDAQSKTPVEGDEETPGKPYECQLCGARYKTRQGLSYHLSHTHKGGRANSGGGR
SRGGGNNPPTPRADPASAGASYQPQAFQSDALAGLAEFQDSYLGYLSAGQDASPTGRSGS
SSTSNSSRRSSGGGGGMTSALSGNGSGSSNNRGTKGSNSAWSGLANVGSPSAMMPNSGTP
TSLNETMREASPASLAVPDIEQQSIMPYLDTSGPRSSEKLVAENLAIPTQIQPSKSPKSQ
GEKNRAQPSPYCDFCLGDASLNKKTGESEELVSCSDCGRSGHPTCLQFTAHMMISVRQYR
WQCIECKCCTLCGTSENDDQLLFCDDCDRGYHLYCLRPPLQEPPEGEWSCDLCLQQFHSK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgctggtgcagacaaacctggagaaaataagcagctttctccaagatgtg
cagtaccgctccttaatgatcaacagtgccaattataatgtccggctcatgcgtgaacgc
aaaactcgcctcccatttctcgattcacagacaggtattgcacagaacccatgcaagtta
tacatgagtgctcgtcatcgcatgccaggaacagttgagggccaactctatgtgtatccc
tctcaaaggtggtgttgcagaaaaagatcatacatggcactggctcatcagtccatcaaa
gaaccagaaggagatgaacatacaatagttacggtggaaaacccagcagctgtgaacaca
gaagagaccagttttgtgtacgagactaaggaaccattctactttgatgatactggattc
ttagaagaagaagaagaggaacccgatgatgacgacgatgacacgtactcaacgcgtgct
gcaccaaccagaaagaggaaaaaagctcctaagattccgaaacctgtgaaaactccaagc
agccgtggaagaaagaagaaggatgcccagtcaaaaacaccagttgaaggtgatgaagaa
actccgggaaaaccctacgagtgccaactgtgtggcgctcgctacaagaccagacagggt
ctctcctaccatctctcgcatacacacaaggggggcagggcaaactctgggggtggacgg
tccagagggggtggcaacaacccccccaccccgagggctgatcccgcctcagctggcgcg
agttaccagccgcaggccttccaatctgatgctctagctggtctggcagagtttcaggac
agttaccttggctacctatctgctggccaagacgcctcgcccacgggacgaagtggaagc
agtagcaccagcaacagcagtagaagatcgagtggtggaggtgggggcatgacttcggca
ttatcaggtaatggaagcggatcgtctaacaaccgtgggaccaaaggaagcaactcggcc
tggtccggacttgctaatgtcgggtcaccgtctgccatgatgcctaacagtgggactcct
acttctcttaatgaaacaatgagagaagccagtccagctagtcttgctgtacctgatatt
gaacagcagtcaataatgccgtatctggacacctcgggaccaagatcgtccgagaaactt
gtggccgaaaatctggccatccctactcaaattcaaccttccaaatctcccaagtctcaa
ggagaaaaaaatcgagctcaaccaagcccatactgtgatttctgcctgggcgatgcttca
ttgaataagaagactggcgagtcagaggaactagtttcatgttcggactgcggtagatct
ggtcatcctacttgtctgcagtttacggctcatatgatgatctcggtgaggcagtaccga
tggcagtgcattgagtgcaagtgttgcacactttgtggcacttcagaaaacgatgaccag
ctattgttttgtgatgactgtgaccgagggtatcacctgtattgtttgcgacctccactt
caagagccacccgagggcgagtggtcctgtgatctatgtctccagcagttccactctaaa
taa
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