Procambarus clarkii (red swamp crayfish): 123767449
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Entry
123767449 CDS
T07930
Symbol
su(f)
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123767449 (su(f))
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123767449 (su(f))
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123767449 (su(f))
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
PRP6_TPR
NRDE-2
RGS
Elongin_A
Motif
Other DBs
NCBI-GeneID:
123767449
NCBI-ProteinID:
XP_045613126
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Position
1:35284265..35313777
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AA seq
705 aa
AA seq
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MEEAPEFGTEKLRRAWATTESNPYDMEAWSLIIRDAQNRSIDTARPIFERLVTTFPTTGK
FWKMFIEQEMRSYNFEKVEKLFQRCLTKVLNIDLWRLYVTYVKETKSSLPTYREKLSQAY
EFAIDKIGMDYNSYTLWNDYANLLKNVEVVGSYAENQKIMAVRKVYQRGIVTPMANIEQL
WRDYLEFEKNINPIIAEKMNIERGRDYMNARRVGKELEAETRGLNRHLPSVPPSALPEET
KQVEIWKRYIRWEKDNPLRTDDQTLVTKRVRFAYEQCLLCLSHHPDIWYEGALFLQESSK
LLSEKGDVNASKIFSEEAAQIYERAISGPLRKNQLLFFAYADFEESRLRYQEVHKIYQRY
IEMEDVDPTLAYLQYMKFARRAEGIKSTREVFKKAREDVRTQFHVYVGAALMEYYCTKNK
DIAFRIFELGLKKFPDNADYIMAYVDYLSHLNEDNNTRVLFERVLTSGQLKNEDTVGLWN
RFLEFECNVGDLASIVKVEKRRAHVLQKLQEFEGKDTAQLVDRYKFMDLYPCTPAELKAI
GYRDISTHTMITNPNIPRGLSIHDAQEPTYARPDFSQMIPFKPKAKYIPGEHPVKGGAFP
PPPAVANLLSLLPPPSCFRGPFVKLEALVDLFMRLNLPEQGGQWSTSGSHDVRLFELSKS
VHWVVDPSGDRKRKVISGDDSDDEDGNKPVLTSDIYRARQQKKMK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgccggaatttgggactgaaaagctccgtcgggcatgggcaacgacagag
tccaatccgtatgacatggaagcatggagcttgattatccgtgatgctcagaatcgttcc
atagacactgcacgtcctatcttcgagcgacttgtgaccacttttcccacaacgggcaag
ttctggaagatgttcattgagcaagagatgaggtcttataattttgagaaagtggaaaag
ctttttcaacgatgtctgacgaaagttctcaacattgatctatggcgtctttatgtcaca
tacgttaaagagacgaagtccagtttgccgacttacagagagaagttgtcacaagcatat
gaatttgccatagacaagattggaatggattacaactcctatacactgtggaatgattat
gccaatcttttaaaaaatgtggaggttgttggttcttatgctgagaaccaaaagattatg
gcagtcagaaaggtataccagcgtggaattgttactccaatggcaaatattgagcagttg
tggagagactacctcgaatttgaaaaaaatatcaacccaattattgcagagaaaatgaac
atagagcgtggtagggattatatgaatgccaggagagttggcaaggagctggaggctgag
acacgtggcttgaaccgtcacctgccaagtgtaccaccgtcggctctcccagaggaaaca
aagcaggtagagatttggaaaagatacatcagatgggagaaggataaccctctacgtaca
gacgatcagacactagtcaccaagcgtgtgagatttgcatatgagcagtgcctcctgtgc
ctctcacaccacccggacatttggtatgaaggtgcgctcttccttcaggagtcctcgaag
ctcttgtcagagaaaggagatgtaaatgccagcaaaatattcagtgaggaagcagctcag
atctatgaaagagccatctctggcccactgagaaagaatcagctgctttttttcgcatat
gctgactttgaggagtctcgactacgctaccaggaagttcataaaatatatcaaagatac
atcgaaatggaagacgttgatcctacgctggcctatcttcaatacatgaaatttgcacga
cgtgcagagggcattaaatctacaagagaagtgttcaagaaggcgcgtgaagatgttcgt
acacagtttcatgtttatgttggtgcagcattaatggagtattattgtacaaaaaataag
gacattgccttcaggatatttgagcttggtctcaagaagtttccagataatgctgattat
attatggcatatgtggactacttgtcacatctcaatgaggataacaacaccagagtatta
tttgaacgtgttttaacctcgggacaattgaagaatgaagatacagttggactttggaat
cgttttctggagtttgagtgtaatgtaggagatctagcatctattgtcaaggttgagaaa
agaagagcacatgtattacaaaagctgcaagaatttgaagggaaggacacagctcagctt
gttgaccgctacaaatttatggacctttatccgtgtactccagctgaactaaaagctata
ggttatcgagatatctcaacacatacaatgataaccaatccaaacattccccgaggcttg
tctatccatgatgcacaagagccaacttatgcgagaccagacttttcacagatgatacca
ttcaagcccaaagccaaatatataccaggcgaacaccctgtcaaaggtggagcgtttcct
ccccctcctgccgtggccaacttgttatctctgctgccaccgccgagctgcttccgtggc
ccctttgtcaaacttgaggctctagtcgatctcttcatgaggcttaatcttcctgagcaa
ggtggtcagtggtcaactagtggtagtcatgatgttcggctctttgaactgtcaaagtcg
gtccattgggttgttgaccccagtggagaccgcaagagaaaagtgatttcaggagatgac
tcggatgatgaagatggtaacaagccagtacttaccagtgatatttacagagctagacaa
caaaagaaaatgaaataa
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