Procambarus clarkii (red swamp crayfish): 123767548
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Entry
123767548 CDS
T07930
Symbol
Ge-1
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123767548 (Ge-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123767548 (Ge-1)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123767548 (Ge-1)
mRNA degradation factors
5'-3' decay
Decapping complex
123767548 (Ge-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
SusD-like_3
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
123767548
NCBI-ProteinID:
XP_045613217
LinkDB
All DBs
Position
67:complement(15039071..15366186)
Genome browser
AA seq
1420 aa
AA seq
DB search
MESLAKAMAAMAHRMEGAGYKEDSMLQALMKTTEQGQSISFLGNEEQCSSALFSSEVKVE
VGMTKHTSGSSAITTRNITNYPWDHHYLSGSLVAQHCTGDYIAYAIKAPQKSSGMVRIIH
CKSGNRGLVKNIEGMLRDLAFAHLANRVILAFTDQYGTLYVCEVTDSTAEGTLNTEMLLE
VSSGTDKVSDNHRVIWCPYIPDEQGSSNDDDGDPAYLLVLTHGPCAEIWNVNVVLHAYGG
GQLRRDQVLVGYQLMEQHSAPITDAAFSPDGTALATAALDGFVKFFQVYLADEEKSPRCL
HQWNPHDGKPLSALFFLDNHKHHTPDVQFWKYAVTGACNNSELRVWSCESWICHQTLRFV
PAAQDPPQSPLTFKAAMDPSANFLLLSDIFRRVMYVIAVYQDGNSSSGTGGGTSGLTGTG
GNFVVKNGGGGGGIARLVSVSEFPVQYPALSMSITDAAWKPYKRWKHDHAHDHTQNAHDD
DEDDDDNDDSGSVDVVDGVVMRCVLINTKSLQEATLRFQPATPLTGHASVCPLDLSASQD
SIVVRDGLTDLSMNLSTSVSEVEGTGSGGDGGIEDQPPPPPPPDALTSPQSSSLSSQHSA
LQTPPASQPPMNLLTPDSFSSPRKPEDSDHADDGIEEGSIPNKVTPIPSKYDVPYSADLE
NAALSLLLRCGSGTLMQNSESENNNRLNILGSVVSGSSKSPPATVLPPPPSGTPSPRGLQ
DEDDAPLATSEVAVSSGIGRVGTSAASSPSLEVQQILHSENGKGEDYVDDEDIQAIYEVK
MVEDDDDDDDEEEEEEPEALRHTHSHPQPPPPLIPEPQPIPQPHPSSVKPSYXSMPQLPP
SLTQPPTSMPQPPSSLHQSPSSVPQSVQSIPQSLNVIPQLSLKPVPLPEVLPSQKPQDMH
TLDQQPTSPAQPVDIFASVKMLPAQLTCAQLEAEIKGGSVSPDSTGSASSSTNQSNLQSK
RTRNYNSVNCKLELASRCVADARTPVSLDQMQQNGPVAPGVSAEDIAELKTLMRTCVNLN
RDQNREVVSQTRMLASKLDKALQQVNLLAKQVEEINAAQSQVQIELPRAVASSLRPVVEA
TLRNELRSVVVPGVLKAMEPLQSRVSQEVHGLLKTTESQIIDALSKVIHSRSFVETLGGS
VSTVLGTTVQNSCREAYNKLLLPGLNALTQQIFAQVNENFSRGTREYLQNVESEVQVGRT
AVQEALTKAAQSLNTACSTLSTQSKSVQENVTKLAAQQNVLSESLGERIRGLVREEVTRS
LQEHQAIVDARSRAHTPAPTPHTLNPKVAQQQVQTLISQGQFNTAFKQALSASDLSLVVF
VCERVNPQQVFNMTPCPLSQDVLLSLVNQLSHDLSTFTDLKIKYLEEAVMNLDTSHPVTR
EHMRPVLQGFQRNLNAYLSVNPNHKKVKMLLLAVNHLVVL
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccttgctaaggccatggcagcgatggcccacagaatggaaggtgccggctac
aaagaggactcgatgctacaggctctgatgaagactactgaacaaggacaatccatttca
tttctagggaatgaagagcagtgtagcagtgcactatttagctcggaggtgaaagttgag
gttggaatgacaaaacacacttctgggtcatcagcaatcacaactagaaacattactaat
tatccttgggatcatcactacctctcgggcagcttggttgctcaacactgcaccggagat
tatattgcttatgctattaaagccccccagaaatccagtggaatggtgcgtatcattcac
tgtaaatctggtaacagaggattggtgaagaatatcgaaggaatgctgcgggacttagcc
ttcgctcatcttgccaacagagttatcttggcatttacagatcaatatgggacgctgtat
gtttgtgaggttactgactcgacagcagaaggaaccctaaacacagaaatgttgttagaa
gtgagtagtggtacagataaggtgagcgacaatcatcgtgtcatatggtgtccttacatc
ccagacgagcagggaagtagtaatgatgatgatggtgatcctgcttacctcttggttcta
actcatggaccctgtgcagaaatctggaatgtgaatgttgtactgcacgcatatggaggt
gggcagctacggcgtgaccaagtacttgttggttaccagctaatggaacaacactctgca
cctattactgatgcagctttcagcccagatggcactgctctagcaacagctgctcttgat
ggctttgtgaaatttttccaggtatacctggcagatgaagagaaatcaccccgttgttta
caccagtggaacccacatgatgggaaacctctctctgccctcttctttcttgacaaccat
aagcaccacaccccagatgtacagttttggaaatacgcagtaacaggggcatgcaacaat
tcagaattacgtgtttggtcatgcgaatcttggatatgtcatcaaactctacgctttgtc
ccagctgcacaagaccctccacagagccccctcacatttaaggcagctatggatccctcg
gccaatttccttttgctctccgatatcttcagacgggtcatgtatgtaattgcagtctac
caagatgggaacagtagtagtggaactggaggtggtactagtgggctgactggtactgga
ggaaactttgttgtgaagaacggtggtgggggtggaggtattgctcgacttgtttctgtc
tccgagtttcctgtccagtaccctgctctgtccatgtccattacagatgcagcttggaaa
ccttataagcgctggaaacatgaccatgcacacgatcacactcaaaatgcacatgatgat
gatgaggacgatgatgataatgatgatagtggcagtgtagatgttgtggatggagtcgtg
atgcgatgtgttttgattaataccaagtctctgcaagaagcaaccttaagattccagcct
gccactccactcactggacatgcgagtgtttgtcctctagacctgagtgcatctcaggac
tcaattgtggtgcgtgacgggctaacagatctgagcatgaacctaagtacgtcggtgtcc
gaagtagaaggaactgggagtggtggtgatggagggattgaagatcagcctccaccacca
cctccacctgatgcacttacctcaccacagagttctagtctttcatcacagcacagtgct
ctccagaccccacctgcctcacagcctcccatgaaccttctgacgccggactccttcagt
tctccacggaaacctgaggattcagatcatgctgatgatggcattgaggaaggatccatt
cctaacaaggtcacccctatccccagcaagtatgatgtgccatattcagcagacttggaa
aatgctgctttgtcattattgttacgttgtggctctggaaccctcatgcaaaacagtgag
tctgagaataataataggcttaatatattgggatcagttgtatctgggtcttcgaaatct
ccgcctgctactgtactgccacctccaccgtctggcactccgtcaccaagaggtctacag
gatgaagatgatgctcctctagccacctctgaagtagctgtatcatctggcataggacgt
gttggtaccagtgcggcatcatcaccatcactggaagtacaacagatacttcattcagaa
aatggcaagggtgaagattatgtagatgatgaggatattcaggcaatatatgaagttaaa
atggtggaagatgatgatgatgacgacgatgaagaggaggaagaggaaccagaagctcta
cgacacactcattctcacccacagcctccaccacctctaattccagaaccacagcccata
ccgcaaccacatccatcttcagtaaaaccatcttacnnatcaatgccacagctcccaccc
tctttaacccaaccccctacatctatgccacagcccccatcatctcttcatcaatcacca
tcctcagttccacaatcagttcagtcaataccacagtcactaaatgttataccacagtta
tccttgaaacctgttccacttcccgaagtgttgccttctcagaagccacaagatatgcat
actcttgatcagcagccaacatctccagcacaaccagtggatatctttgcatcggtaaaa
atgctaccagctcagttaacctgtgctcaacttgaagctgaaattaagggtggatcagtc
agcccagattccaccggttctgcaagttcttccactaatcaaagtaatcttcagtccaaa
agaacacggaactataattcagtgaattgcaaacttgagctagcaagcagatgtgtagct
gatgcaagaactcctgtaagtttagatcagatgcaacagaatggacctgtggcaccagga
gtgagtgcagaagacattgcagaattgaaaaccctgatgaggacttgtgtgaatttgaat
cgagatcaaaacagagaagtagtgtctcagactcgcatgttagccagtaaattggacaaa
gcacttcagcaagtcaatctactagccaaacaggtcgaggagataaacgcggcacagtcg
caagtacaaattgagctgcctcgtgctgttgcctcatcccttaggcctgtggttgaggct
actttgagaaatgagctgagaagtgtggttgttccgggagttctgaaggcaatggagcct
ctgcagtctcgtgtttcccaagaggtacatggccttctcaagaccacagaaagtcaaatc
atagatgccctctccaaagttattcattcaagatcatttgtggagacccttggaggatca
gttagtacagtattgggaacaacagtgcagaactcgtgccgagaggcatacaacaaatta
cttttgccaggactcaatgcacttacccaacagatctttgctcaagttaatgaaaacttc
agccggggcactagagaatatcttcaaaatgtggagagtgaagtgcaagttggacgtaca
gcagtgcaggaagcactcaccaaggctgcccagtctctgaacactgcgtgttctaccctc
agcacacagtccaagtctgtgcaggaaaatgtcaccaagctagctgctcaacagaatgta
ttatcagaatctctgggtgaaagaatacgagggttagtacgggaagaggtgacacgttca
ttacaagaacaccaagccattgttgatgcccgaagtcgtgcccacacacctgccccaaca
ccccacactctcaatccaaaggtggcgcaacaacaagttcaaacactaatttcacaagga
cagttcaacacagcatttaagcaggcactgtctgcatctgacctgagccttgtggtgttt
gtatgtgaacgtgtcaacccacaacaagtcttcaacatgactccttgccctctcagtcaa
gatgtcctactctctttggttaatcaactttcgcatgatctctctaccttcacagatcta
aagatcaaatatttggaagaggcagttatgaacttggatacatctcatcctgtaacacgt
gaacacatgcgaccagtcttacaaggatttcaacgtaacctgaacgcatacttgtctgta
aatccaaatcataaaaaggtgaagatgctgcttctagcagtcaaccatcttgttgtttta
taa
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