Procambarus clarkii (red swamp crayfish): 123767659
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Entry
123767659 CDS
T07930
Symbol
Rrp46
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123767659 (Rrp46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123767659 (Rrp46)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123767659 (Rrp46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
GcvP2_C
Motif
Other DBs
NCBI-GeneID:
123767659
NCBI-ProteinID:
XP_045613458
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All DBs
Position
67:25912707..25921694
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AA seq
225 aa
AA seq
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MCCCQCRSSWCRPVKMAKHACQLNFLCRSDGSALYSIGNTVALASVNGPGEVKMFHRHYN
RSHLEVCYSPATGQCMIAERALESVILHTVEQVILLHLHPRTATNVTIQEMQSDGLTLSA
SINATCMALLDAGVQMKSTFAAVTCCLTSAGTIIIEPTEAEIKESVAVATFVFDGHALNV
LSAHQEGCLNTENFNACLKKCQTAAKDVLNFYRRIMEEKYSSDIS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgttgtcagtgtcgctcctcatggtgtagaccagtaaaaatggcgaagcatgct
tgtcagctaaactttttgtgtcggtcagatggctctgcactctactcaataggcaacaca
gtggcacttgcttcagtaaatgggcctggtgaagttaagatgttccatcgtcattacaac
aggtcacatctagaagtgtgttatagtcccgccacaggccaatgcatgatagcagagcga
gccttggagtcggtgatcctacacacagttgaacaagtgatcctgctacacctccaccct
agaactgcaactaatgtcaccatacaagagatgcagtctgatggactgacactgtcagca
agtattaatgccacctgcatggccctgcttgatgctggagtacaaatgaagtctacattt
gcagcagtcacctgttgtctcacatctgcaggaaccatcataattgaacctacagaagct
gaaataaaggaaagtgtggctgtagcaacatttgtatttgacggtcacgcattgaatgtt
ttgtcggcacatcaagaagggtgtctcaatacagaaaactttaatgcttgtctcaagaag
tgccagactgctgccaaggatgttttgaatttctacagacggattatggaggagaagtat
agtagtgatataagttag
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