| Entry |
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| Name |
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
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| KO |
| K05038 | solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9 |
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| Organism |
pcla Procambarus clarkii (red swamp crayfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pcla00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123767810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:pcla02000]
123767810
Transporters [BR:pcla02000]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123767810
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
67:complement(26114457..26132036)
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| AA seq |
654 aa
MRSATTTGATVAIMAKEQRTDATLQETSGEGGDNREKWGNQLQFVLYCLSYAVGFGNVWR
FPYLCYKNGGAAFLIPYATMLLCAGLPLFFLELVMGQYVSLGPAALFPKLAPILSGLGWA
QVVLSLLTAVYYNLILAWTLFYVVSSFASRLPWGHCDNEFNSPECFVEDAARVCRNQSLY
YYNRSCLSTQEYCSLSNLTNYNETHCYSHQVPGEVRAVESVVYRISASEDFFRNRMLGVT
GRSWEDMGGLRWELVGCLALAWVIVAACLAKGIKTTGKIVYFTTLFPYVVLMILFVRGVT
LDGAYQGIEFYLLKPNMTRLMEVEVWNDAAIQIFYSLGVCFGCLITLSSYNKFNNNCLRD
AIVIAFSNCLTSVFTGVVIFSVLGFLAKQLGVEVKDVATSGSGLAFVVYPAALNLMPVPQ
LWAVLFFFMLATIGFGSQFTMVETVITSLADQFEWMRRRKVVVVVATCVVLFLLGGTLCL
EGGVFMFELFFFYSTGISMFVLCLLQLFGVHYIYGFSKLMKNLEEMGMRLRRPLYWYCTS
TWLVITPGTLIVIGFFSLYHFLPASWGDYVFPYNIQILGWFLCFSSLICFPIGAIYVICT
NTKSFRELFVTSPEFCPSDVRNLLKEAQKATSKGQHNKENGQTNLAMKMSCEEL |
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| NT seq |
1965 nt +upstreamnt +downstreamnt
atgagaagtgccaccactacaggagccacagtcgccatcatggccaaggagcagcggacc
gatgctactttacaggagacctctggcgagggtggtgacaacagggagaagtggggcaac
cagctccagtttgtcttatactgtttgagctacgctgtgggcttcggtaatgtctggagg
ttcccctatctctgctacaagaacggcggggcggcgtttctgatcccctacgcgaccatg
ctgctgtgtgcgggtctacccctcttcttcttggagctcgtcatgggccagtacgtcagc
ctggggccagctgctctcttccctaagctggctcccatcctctcagggctcgggtgggca
caggtggtgctctctctgctgacagccgtctactacaacctgatactggcgtggacgttg
ttctacgtggtctcctccttcgcctcacggctgccttgggggcactgtgacaacgaattc
aactctccagagtgctttgtggaggatgctgccagagtatgcaggaaccagtcgctctac
tactacaataggtcctgcctcagcacccaggagtactgcagcctgtccaacctcaccaac
tacaacgagactcattgctacagtcaccaagtccctggcgaggtgagggcggttgagagc
gtagtgtacaggatatccgccagcgaggacttcttcaggaatcggatgctgggcgtgact
gggaggagctgggaggacatgggaggccttcgctgggagttggtaggctgtctggctctg
gcttgggttatcgttgccgcctgcctggccaagggtatcaagaccacggggaaaatcgtc
tacttcactactctttttccctatgtcgtcctcatgatcctcttcgtcagaggcgttacc
cttgatggagcatatcaggggatagagttctacttgctgaagcccaacatgactcgcctg
atggaggtggaagtgtggaatgatgctgccatacagatcttctattctctcggggtctgc
ttcggttgcctcattaccctctcctcctacaacaagttcaataataactgcttgagggat
gcgatcgtcatcgccttctccaactgcctgacctctgtgttcaccggtgtcgtcatcttc
agcgtgctggggttcctggccaagcagcttggggtggaggtgaaggatgtggccacctcg
ggctccggcctggccttcgtcgtgtacccggcggcactcaacctcatgcccgtcccacaa
ctttgggctgtcctctttttctttatgcttgcgaccattgggttcggctcacagttcact
atggtggagacagtgataacgtctcttgcggaccagtttgagtggatgcgacggaggaag
gtggtcgtggtggtggcgacgtgtgttgtactcttcctgctgggtggtaccttgtgcctg
gagggcggagtcttcatgttcgagctcttcttcttttactcgacgggcatatctatgttc
gtgttatgccttctgcagctctttggtgtccactacatttacgggttctctaagcttatg
aagaacctggaggagatgggcatgcggctgcgacgtccactctactggtactgtacctcc
acctggctggtcatcacccccggaacactcatagtgattggtttcttcagtttgtaccat
ttcctcccggcctcttggggagactacgtcttcccctacaacatccagatcctggggtgg
ttcctttgcttctcttctctgatctgcttccccattggtgccatctatgttatctgtacc
aacacgaagagcttcagagagcttttcgtaacgtcaccagagttctgtcctagcgatgta
cgtaatctactcaaggaggcgcagaaggcgacgagcaagggtcagcacaacaaagaaaac
ggacaaactaacttggccatgaagatgagctgcgaggaactttaa |
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