Procambarus clarkii (red swamp crayfish): 123767934
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Entry
123767934 CDS
T07930
Symbol
HBS1
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Pathway
pcla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123767934 (HBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123767934 (HBS1)
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123767934 (HBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
123767934
NCBI-ProteinID:
XP_045614071
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All DBs
Position
58:complement(17390781..17408826)
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AA seq
729 aa
AA seq
DB search
MSRHRDVRKLDYDEEYDDAHDEDVYGHSVEEGDYGLSPGTEQYLYSRSRENTHGFGQYFP
TGEDIKEEEEAFDNPAYKTVSLERNCRDSPSYAKPLLSPDDEVRLASILDELRNILGDKY
TEKELTQAVLANKFELDASLNALLDKSSSPATAQSLPQREKRVRTREKPFTASEGVKQLS
LTQNQKYKGELVKNCKVPSSAALPSQLSAPVVVTTPATGGSTPRVVRGFHVQNDKESTTC
ENNVGQHEQESKRSRSKTPVRGWKDKEKEKDKDVSTVAKTPARIRDKPVDVVSEYKEQRG
SGKDLLNLVVVGHVDAGKSTLMGHLLYLQGNVGQRTMHKYEQESKKVGKQSFMYAWVLDD
TDEERARGITVDIAQRIFESETKVITLLDAPGHRDFIPNMITGAARADVAILVVDACTGE
FEAGFESGGQTREHAILIRSLGVSQLVVCINKLDSVEWSEDRFKDIKHNLRMFLKTVGFK
DIDVVYIPCSGLTGENLVKPTTEKRLLSWYTGPTLLQAIDKLKVPERGISRPVRLCVSDV
YKGQGSNMCVSGRLDTGYVQQNDRLLLLPQGDVLNVKGVQADNGSSATAFAGDHVTLTVN
GVDPNVLHIGDFLCDPTHPIPIVSRVQARIVVFNITVPLIKGAQVDFHYQAVTEPAKIKK
LVSQLHKTTGQIVKSKPRALVKNTAAVIELAFTRPLCLELFRDYKELGRFMLRTGGSTIA
AGLVTQILE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcatagagacgttaggaaattagattacgacgaagaatatgatgatgctcat
gatgaagatgtgtatggccactcagttgaagaaggtgactatgggctgtctccaggaaca
gaacaatatttgtacagcagaagtcgtgaaaatacacatggatttggtcaatattttcca
acgggagaggatattaaggaagaagaagaagcttttgacaaccctgcttataagacagtg
tccttagaacgaaactgtcgcgattctccaagctacgccaagccacttttatcaccagat
gatgaggttcgtttagcgtcaattctggatgagctgcggaacatcttgggagacaaatat
actgaaaaggaattgacgcaagcagttttagccaataagtttgagcttgatgcctctcta
aatgctttgctcgacaagtcatcatcaccagcgacagcacaatccctcccacagagagaa
aagcgggttagaactagagaaaaaccttttacagcatcagaaggggttaagcagctctcc
ctaacacaaaatcaaaaatataagggggaattggtaaaaaattgtaaggtgccatcatct
gcagcccttcctagtcagctttctgcacctgtagttgtaacaactcctgcgacaggtggc
agcactcctcgagtggtgcggggcttccatgttcaaaatgataaagaaagcacaacatgt
gagaataacgtgggtcaacacgagcaggagagcaagcgatctcgcagcaaaacccctgta
cgtggatggaaagataaagagaaagagaaggataaagacgtgtctacagtagccaaaacc
cctgctagaatcagggacaagcctgtagatgtggtgtcagagtacaaggagcaacgaggg
agtgggaaggacctccttaacttggtggtggttggccatgttgatgctggcaagtcaacg
ctgatggggcatctcttgtacctccagggtaatgttggtcagagaactatgcacaaatat
gaacaagaaagcaagaaagttggcaaacagtccttcatgtatgcctgggtgttagatgat
acagatgaagagagagctcggggcataacagtagatattgcccagagaatatttgagtcg
gaaaccaaagtaataacacttcttgatgctccaggacacagagacttcattcctaacatg
atcacaggagcagcaagagccgatgtcgccattctagttgttgatgcctgcacgggggaa
tttgaagcagggtttgaaagcggtgggcagacgagggaacatgctattctgataaggtct
ttaggagtttcacaattggttgtgtgtataaacaaattggactctgttgaatggagtgaa
gaccggttcaaggatataaagcataatttacggatgtttcttaagaccgttggctttaag
gacatcgacgttgtgtatattccatgttcaggtctaactggagaaaatcttgtaaaaccc
accacagaaaagagattattatcctggtatacaggcccaacactgctccaggcaattgat
aagttaaaagtaccagagcgtggtatttctcgaccagttagactgtgtgtgagtgatgtt
tataaagggcagggatccaacatgtgtgtcagtggacggcttgatactggctatgtccag
cagaatgaccggctgctgctgcttccacaaggagatgtacttaatgtcaaaggtgttcaa
gcagacaatggttcatctgccacagcctttgctggtgaccatgtgacgctgaccgttaat
ggtgttgatcccaatgtgctccatattggcgactttttgtgcgatccgacccatcccatc
ccaattgtttccagggtgcaagctcgcattgtagtgttcaatataacggtacctctgatc
aagggagcacaggttgattttcactatcaggctgtaacagaacctgcaaaaattaaaaaa
ctagtatcccagctacataagactactggacagattgtgaaaagtaaaccacgagcactc
gtcaaaaacactgctgcagtaatagaactggcattcacgcgtcctctgtgtctggagctt
ttcagagactataaagaattaggacgctttatgttgagaactggaggctccactatagct
gcgggacttgtaactcagatcctggaataa
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