Procambarus clarkii (red swamp crayfish): 123767936
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Entry
123767936 CDS
T07930
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcla03019
]
123767936
03041 Spliceosome [BR:
pcla03041
]
123767936
Messenger RNA biogenesis [BR:
pcla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123767936
Spliceosome [BR:
pcla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123767936
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_MUD2_C
RRM_5
Motif
Other DBs
NCBI-GeneID:
123767936
NCBI-ProteinID:
XP_069162859
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All DBs
Position
58:18441373..18477730
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AA seq
302 aa
AA seq
DB search
MNTRVNKVIAKLQVLHANGSERSNNWAFGDVVREIMSQFVLAEFAPGVLRIGRPVTCSHL
PQVTVTQPDPGNHCVAQSANQKPLTFDDVYNQSSPTNCTVYCGGITNGLSEELMQKTFAP
YGQIHEIRVFKDKGYAFVRFSTKESATHAIVSVHNSEINGQPVKCSWGKESGDPNNTPVT
TQVMTLTDVSECLSLQPLPGSQYPYNYAGQMGYWYPQGYPPQVQSQQFLGMQGFAYGQYG
YQQGMAGMAGVPAWQGVPQPQLPTGQMPQLQQPASMVGAYPVQQFQLSSPYLLGSTPGTL
VQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgagagttaataaagtaattgcaaagctccaggtacttcatgccaacgggtct
gaaaggtctaataactgggcattcggtgatgtagtgcgggaaatcatgtcacagttcgta
ctcgcagaatttgcacctggagtgctcaggattgggagacccgtcacctgtagccacctg
ccacaggtaacggtaacccaacctgatcctggcaaccactgtgtcgcacagtctgccaat
cagaagccgctgacgttcgatgatgtgtacaaccaatcatcgcctaccaactgcacggtg
tactgcggcggcattaccaatggactgtctgaggaacttatgcagaaaacgtttgcgcct
tacggacagattcacgagatccgggtcttcaaggataagggctacgccttcgtcaggttc
tccacgaaggagtccgccacccacgccatcgtctccgtacacaactctgagatcaacggc
cagccagtcaagtgttcgtggggcaaggagtcaggggaccccaacaacactcccgtcact
acacaagtcatgaccctcaccgatgtgtccgaatgcttgtctttgcagccgctgcctggg
tcgcagtacccgtacaactacgcgggacagatgggctactggtacccacaggggtatccg
ccccaggtgcagagtcaacagttcctgggcatgcaagggttcgcctatggacagtatggc
taccaacaggggatggcgggaatggcaggagtgccagcctggcaaggagtgccacagcct
cagctacccacggggcaaatgccgcagctgcagcaaccagcgtctatggtgggcgcttat
ccggtacagcagtttcagctatcgagcccctacctcctgggcagcactcctggcaccctg
gtgcagtaa
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