Procambarus clarkii (red swamp crayfish): 123768137
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Entry
123768137 CDS
T07930
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pcla
Procambarus clarkii (red swamp crayfish)
Brite
KEGG Orthology (KO) [BR:
pcla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcla03041
]
123768137 (Caper)
Spliceosome [BR:
pcla03041
]
Common components
Common spliceosomal components
General mRNP proteins
123768137 (Caper)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RBD_DEAH11
Nup35_RRM_2
RRM_10
RRM_7
OATP
Motif
Other DBs
NCBI-GeneID:
123768137
NCBI-ProteinID:
XP_045614437
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All DBs
Position
59:20013572..20038770
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AA seq
626 aa
AA seq
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MRTVSKTGITLKKMLSYAVVSLILYSTFFLLLIFLLCCDWCMCCILMQYNFTWRQGSSLK
FAFCRRPCLGWTLRLERHQDGGSSSVDAKPKENGHTSSKDKKDKDRDKDSHRDREKDRDK
KDRDRDRDRDRVKDKDKDRDRDKDRDRDKDRGDRDKDKDRDRDKDRDRRRRSRSKSRDKD
RRRKTKSKSRDREKRRKSRSRSRDKDRRKKSRSRSRDRRRKSRSRDRRRSKSRSRDHRRR
SRSRDRDRRRSRSREHRRSRSRSKTPKTELTVEERDARTVFCMQLSSRIRSRDLEDFFSV
VGKVNDVRIITDTKTRRSKGIAYVEFCEVESVPLALGLSGQKILGVPIVCQPTQAEKNRA
ASTAAVQDQKAATGPMRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLIMDSETGRSKGYG
FITFHNSDDAKKALEQLNGFELAGRPMKVNHVTERSETQQGTSLLDSDEMERAGIDLGAT
GRLQLMAKLAEGTGLQLPAAAANALHMPAQPQQQPAPPIATQCFLLSNMFDPSTESNPNW
ADEIRDDVLEECNKHGGVLHIFVDRQSAQGNVYVKCPTIATAAASVNALHGRWFAGKMIT
AAYVPVMSYHSLFPEAMTASQLVFPR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaggacagtcagtaaaacaggtataaccttgaagaaaatgttaagttatgctgtggtc
agtctgatcttatattccactttttttttattattaattttcctcttgtgctgtgactgg
tgcatgtgttgtatattgatgcaatataacttcacgtggcgtcaaggctccagtctaaag
tttgcgttttgcaggcggccgtgccttggttggaccctacggctagagagacatcaggac
ggaggatcctcatcagtagacgccaagcccaaggaaaatggacacacatcctcaaaagac
aaaaaagacaaggatcgggacaaagatagtcatagggatagggaaaaagatagagataag
aaagacagagatagggatagagatcgggacagagttaaagacaaagataaggacagagat
agggacaaagatagagatagggacaaggacagaggagatagggataaagacaaggacaga
gacagggacaaagacagggatagacgaagaagatcacgcagcaagtcacgtgataaagac
cgcagaaggaaaacaaagagcaagtctcgtgacagggaaaagaggagaaagtctcgctca
cgttccagggacaaggatcgcaggaaaaagtcgcgttctcgatctcgtgacaggcgtcgt
aaatcacgatccagggatcgtagacgcagtaagagtcgtagccgtgatcacaggaggaga
agccgtagtcgggatcgggatcgaagacggagtcgtagcagggagcacagacgttccaga
tcaaggagtaaaacgcctaaaacagaattgacagtagaagagagagatgctcggacagtg
ttctgcatgcagctatcttctcgtatccggtcacgtgatctggaggactttttctcagtt
gtagggaaagtaaatgatgttcgtattatcacagacacaaagacacgcagatcaaaagga
attgcctatgttgagttttgtgaagtagaatccgtaccattggctttgggactgtcaggt
cagaagatactcggtgtgccgattgtatgccagccaacgcaagccgagaaaaatcgcgct
gcctcaacagcagcggtacaagaccagaaagctgctacaggtccaatgagactttatgtg
gggtctttgcatttcaacattactgaggacatgctaaggggcatatttgaaccttttgga
aaaattgaccacattcaactcataatggactctgagactggaagatcaaaaggttatgga
ttcattacattccacaattccgatgatgcgaaaaaggccttggagcagttgaatggcttt
gaactagctgggaggcctatgaaagtaaaccatgtcacagaacgctctgaaacacagcag
ggaacatcacttcttgattcagatgaaatggagagagcaggcattgatttaggtgcaaca
gggcgccttcagttgatggccaagttagcagagggaactggtcttcagcttcctgcagca
gctgccaatgctttacacatgcctgcgcaaccacagcaacagccagcaccgcccattgct
actcagtgtttccttctctccaatatgtttgatccttcaacggaatctaatcctaattgg
gcagatgaaattagagatgatgttttagaagaatgtaacaaacatggcggcgttctgcat
atatttgtggatagacagtctgctcagggtaatgtctacgtcaaatgtcccaccatagca
accgctgcggcctctgttaacgccctgcacggacgatggtttgccggtaaaatgataact
gcagcatatgttcctgttatgagttaccattccctgttccccgaggcgatgactgcatca
cagttggtgtttccacgatga
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